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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
751 O_BomoBR100677_internal:A_BomoBR_DN30709_c3_g1_i1
145bp
752 O_BomoBR100678_5prime_partial:A_BomoBR_DN30709_c3_g1_i3
618bp
 rootletin_[Bombyx_mori]
GO:0001917 C photoreceptor inner segment
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007049 P cell cycle
GO:0008104 P protein localization
GO:0010457 P centriole-centriole cohesion
GO:0010669 P epithelial structure maintenance
GO:0015629 C actin cytoskeleton
GO:0019894 F kinesin binding
GO:0030030 P cell projection organization
GO:0032053 P ciliary basal body organization
GO:0033365 P protein localization to organelle
GO:0035253 C ciliary rootlet
GO:0045494 P photoreceptor cell maintenance
GO:0051297 P centrosome cycle
GO:0051656 P establishment of organelle localization
GO:0070062 C extracellular exosome
753 O_BomoBR100679_complete:A_BomoBR_DN30709_c3_g1_i3
159bp
754 O_BomoBR10067_complete:A_BomoBR_DN31320_c0_g1_i12
547bp
 probable_tRNA_(guanine(26)-N(2))-dimethyltransferase_isoform_X1_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0002940 P tRNA N2-guanine methylation
GO:0003723 F RNA binding
GO:0004809 F tRNA (guanine-N2-)-methyltransferase activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
755 O_BomoBR100680_complete:A_BomoBR_DN30709_c3_g1_i4
558bp
 rootletin_[Bombyx_mori]
GO:0001917 C photoreceptor inner segment
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007049 P cell cycle
GO:0008104 P protein localization
GO:0010457 P centriole-centriole cohesion
GO:0010669 P epithelial structure maintenance
GO:0015629 C actin cytoskeleton
GO:0019894 F kinesin binding
GO:0030030 P cell projection organization
GO:0032053 P ciliary basal body organization
GO:0033365 P protein localization to organelle
GO:0035253 C ciliary rootlet
GO:0045494 P photoreceptor cell maintenance
GO:0051297 P centrosome cycle
GO:0051656 P establishment of organelle localization
GO:0070062 C extracellular exosome
756 O_BomoBR100681_complete:A_BomoBR_DN30709_c3_g1_i4
159bp
757 O_BomoBR100682_complete:A_BomoBR_DN30709_c4_g2_i1
223bp
 glycosaminoglycan_xylosylkinase_homolog_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
758 O_BomoBR100683_complete:A_BomoBR_DN30709_c4_g2_i1
210bp
 glycosaminoglycan_xylosylkinase_homolog_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
759 O_BomoBR100684_complete:A_BomoBR_DN30709_c4_g2_i2
224bp
 glycosaminoglycan_xylosylkinase_homolog_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
760 O_BomoBR100685_complete:A_BomoBR_DN30709_c4_g2_i2
150bp
 glycosaminoglycan_xylosylkinase_homolog_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
761 O_BomoBR100686_5prime_partial:A_BomoBR_DN30709_c4_g3_i1
1244bp
 LOW_QUALITY_PROTEIN:_nucleoprotein_TPR_[Bombyx_mori]
GO:0000022 P mitotic spindle elongation
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0003677 F DNA binding
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005652 C nuclear lamina
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005719 C euchromatin
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006325 P chromatin organization
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0007346 P regulation of mitotic cell cycle
GO:0009408 P response to heat
GO:0010965 P regulation of mitotic sister chromatid separation
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016363 C nuclear matrix
GO:0016568 P chromatin organization
GO:0030496 C midbody
GO:0031490 F chromatin DNA binding
GO:0031965 C nuclear membrane
GO:0032888 P regulation of mitotic spindle elongation
GO:0034399 C nuclear periphery
GO:0034401 P obsolete chromatin organization involved in regulation of transcription
GO:0034976 P response to endoplasmic reticulum stress
GO:0042405 C nuclear inclusion body
GO:0043021 F ribonucleoprotein complex binding
GO:0045840 P positive regulation of mitotic nuclear division
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051028 P mRNA transport
GO:0051225 P spindle assembly
GO:0051233 C spindle midzone
GO:0051301 P cell division
GO:0051781 P positive regulation of cell division
GO:0051983 P regulation of chromosome segregation
GO:0060236 P regulation of mitotic spindle organization
GO:0070090 C metaphase plate
GO:0072686 C mitotic spindle
GO:0090235 P regulation of metaphase plate congression
GO:0090267 P positive regulation of mitotic cell cycle spindle assembly checkpoint
GO:0090316 P positive regulation of intracellular protein transport
GO:1901673 P regulation of mitotic spindle assembly
GO:1990047 C spindle matrix
762 O_BomoBR100687_complete:A_BomoBR_DN30709_c4_g3_i1
163bp
763 O_BomoBR100688_complete:A_BomoBR_DN30709_c4_g3_i1
122bp
764 O_BomoBR100689_3prime_partial:A_BomoBR_DN30709_c4_g4_i1
974bp
 LOW_QUALITY_PROTEIN:_nucleoprotein_TPR_[Bombyx_mori]
GO:0000022 P mitotic spindle elongation
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0003677 F DNA binding
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005652 C nuclear lamina
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005719 C euchromatin
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006325 P chromatin organization
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0007346 P regulation of mitotic cell cycle
GO:0009408 P response to heat
GO:0010965 P regulation of mitotic sister chromatid separation
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016363 C nuclear matrix
GO:0016568 P chromatin organization
GO:0030496 C midbody
GO:0031490 F chromatin DNA binding
GO:0031965 C nuclear membrane
GO:0032888 P regulation of mitotic spindle elongation
GO:0034399 C nuclear periphery
GO:0034401 P obsolete chromatin organization involved in regulation of transcription
GO:0034976 P response to endoplasmic reticulum stress
GO:0042405 C nuclear inclusion body
GO:0043021 F ribonucleoprotein complex binding
GO:0045840 P positive regulation of mitotic nuclear division
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051028 P mRNA transport
GO:0051225 P spindle assembly
GO:0051233 C spindle midzone
GO:0051301 P cell division
GO:0051781 P positive regulation of cell division
GO:0051983 P regulation of chromosome segregation
GO:0060236 P regulation of mitotic spindle organization
GO:0070090 C metaphase plate
GO:0072686 C mitotic spindle
GO:0090235 P regulation of metaphase plate congression
GO:0090267 P positive regulation of mitotic cell cycle spindle assembly checkpoint
GO:0090316 P positive regulation of intracellular protein transport
GO:1901673 P regulation of mitotic spindle assembly
GO:1990047 C spindle matrix
765 O_BomoBR10068_5prime_partial:A_BomoBR_DN31320_c0_g3_i7
938bp
 SCY1-like_protein_2_[Bombyx_mori]
GO:0002092 P positive regulation of receptor internalization
GO:0004672 F protein kinase activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0008333 P endosome to lysosome transport
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0030136 C clathrin-coated vesicle
GO:0031410 C cytoplasmic vesicle
GO:0048471 C perinuclear region of cytoplasm
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:2000286 P receptor internalization involved in canonical Wnt signaling pathway
GO:2000370 P positive regulation of clathrin-dependent endocytosis
766 O_BomoBR100690_complete:A_BomoBR_DN30709_c4_g5_i1
168bp
 glycine_cleavage_system_H_protein,_mitochondrial_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005960 C glycine cleavage complex
GO:0006546 P glycine catabolic process
GO:0019464 P glycine decarboxylation via glycine cleavage system
GO:0035220 P wing disc development
767 O_BomoBR100691_complete:A_BomoBR_DN30709_c4_g2_i3
423bp
 glycosaminoglycan_xylosylkinase_homolog_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
768 O_BomoBR100692_complete:A_BomoBR_DN30709_c4_g3_i2
143bp
769 O_BomoBR100693_complete:A_BomoBR_DN30709_c4_g3_i2
109bp
 LOW_QUALITY_PROTEIN:_nucleoprotein_TPR_[Bombyx_mori]
770 O_BomoBR100694_5prime_partial:A_BomoBR_DN30709_c4_g2_i4
213bp
 glycosaminoglycan_xylosylkinase_homolog_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
771 O_BomoBR100695_5prime_partial:A_BomoBR_DN30709_c4_g2_i5
289bp
 glycosaminoglycan_xylosylkinase_homolog_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
772 O_BomoBR100696_5prime_partial:A_BomoBR_DN30709_c4_g3_i3
824bp
 LOW_QUALITY_PROTEIN:_nucleoprotein_TPR_[Bombyx_mori]
GO:0000022 P mitotic spindle elongation
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0003677 F DNA binding
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005652 C nuclear lamina
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005719 C euchromatin
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006325 P chromatin organization
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0007346 P regulation of mitotic cell cycle
GO:0009408 P response to heat
GO:0010965 P regulation of mitotic sister chromatid separation
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016363 C nuclear matrix
GO:0016568 P chromatin organization
GO:0030496 C midbody
GO:0031490 F chromatin DNA binding
GO:0031965 C nuclear membrane
GO:0032888 P regulation of mitotic spindle elongation
GO:0034399 C nuclear periphery
GO:0034401 P obsolete chromatin organization involved in regulation of transcription
GO:0034976 P response to endoplasmic reticulum stress
GO:0042405 C nuclear inclusion body
GO:0043021 F ribonucleoprotein complex binding
GO:0045840 P positive regulation of mitotic nuclear division
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051028 P mRNA transport
GO:0051225 P spindle assembly
GO:0051233 C spindle midzone
GO:0051301 P cell division
GO:0051781 P positive regulation of cell division
GO:0051983 P regulation of chromosome segregation
GO:0060236 P regulation of mitotic spindle organization
GO:0070090 C metaphase plate
GO:0072686 C mitotic spindle
GO:0090235 P regulation of metaphase plate congression
GO:0090267 P positive regulation of mitotic cell cycle spindle assembly checkpoint
GO:0090316 P positive regulation of intracellular protein transport
GO:1901673 P regulation of mitotic spindle assembly
GO:1990047 C spindle matrix
773 O_BomoBR100697_complete:A_BomoBR_DN30709_c4_g3_i3
122bp
774 O_BomoBR100698_complete:A_BomoBR_DN30709_c4_g2_i6
145bp
 glycosaminoglycan_xylosylkinase_homolog_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
775 O_BomoBR100699_complete:A_BomoBR_DN30709_c4_g5_i2
168bp
 glycine_cleavage_system_H_protein,_mitochondrial_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005960 C glycine cleavage complex
GO:0006546 P glycine catabolic process
GO:0019464 P glycine decarboxylation via glycine cleavage system
GO:0035220 P wing disc development
776 O_BomoBR10069_complete:A_BomoBR_DN31320_c0_g3_i7
106bp
777 O_BomoBR1006_complete:A_BomoBR_DN30295_c0_g6_i1
172bp
778 O_BomoBR100700_5prime_partial:A_BomoBR_DN30709_c4_g3_i4
1207bp
 LOW_QUALITY_PROTEIN:_nucleoprotein_TPR_[Bombyx_mori]
GO:0000022 P mitotic spindle elongation
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0003677 F DNA binding
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005652 C nuclear lamina
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005719 C euchromatin
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006325 P chromatin organization
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007094 P mitotic spindle assembly checkpoint signaling
GO:0007346 P regulation of mitotic cell cycle
GO:0009408 P response to heat
GO:0010965 P regulation of mitotic sister chromatid separation
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016363 C nuclear matrix
GO:0016568 P chromatin organization
GO:0030496 C midbody
GO:0031490 F chromatin DNA binding
GO:0031965 C nuclear membrane
GO:0032888 P regulation of mitotic spindle elongation
GO:0034399 C nuclear periphery
GO:0034401 P obsolete chromatin organization involved in regulation of transcription
GO:0034976 P response to endoplasmic reticulum stress
GO:0042405 C nuclear inclusion body
GO:0043021 F ribonucleoprotein complex binding
GO:0045840 P positive regulation of mitotic nuclear division
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051028 P mRNA transport
GO:0051225 P spindle assembly
GO:0051233 C spindle midzone
GO:0051301 P cell division
GO:0051781 P positive regulation of cell division
GO:0051983 P regulation of chromosome segregation
GO:0060236 P regulation of mitotic spindle organization
GO:0070090 C metaphase plate
GO:0072686 C mitotic spindle
GO:0090235 P regulation of metaphase plate congression
GO:0090267 P positive regulation of mitotic cell cycle spindle assembly checkpoint
GO:0090316 P positive regulation of intracellular protein transport
GO:1901673 P regulation of mitotic spindle assembly
GO:1990047 C spindle matrix
779 O_BomoBR100701_complete:A_BomoBR_DN30709_c4_g3_i4
163bp
780 O_BomoBR100702_complete:A_BomoBR_DN30709_c4_g3_i4
122bp
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