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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
721 O_BomoBR10064_5prime_partial:A_BomoBR_DN31320_c0_g1_i9
248bp
 probable_tRNA_(guanine(26)-N(2))-dimethyltransferase_isoform_X1_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0002940 P tRNA N2-guanine methylation
GO:0003723 F RNA binding
GO:0004809 F tRNA (guanine-N2-)-methyltransferase activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
722 O_BomoBR100650_complete:A_BomoBR_DN30707_c2_g1_i18
213bp
 ATP-dependent_DNA_helicase_PIF1-like_[Bombyx_mori]
723 O_BomoBR100651_complete:A_BomoBR_DN30707_c2_g1_i19
181bp
 ATP-dependent_helicase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000723 P telomere maintenance
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
724 O_BomoBR100652_complete:A_BomoBR_DN30707_c2_g1_i20
213bp
 ATP-dependent_DNA_helicase_PIF1-like_[Bombyx_mori]
725 O_BomoBR100653_complete:A_BomoBR_DN30707_c2_g1_i22
181bp
 ATP-dependent_helicase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000723 P telomere maintenance
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
726 O_BomoBR100654_complete:A_BomoBR_DN30707_c2_g1_i22
102bp
727 O_BomoBR100655_complete:A_BomoBR_DN30785_c2_g3_i2
515bp
 N-sulphoglucosamine_sulphohydrolase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005764 C lysosome
GO:0006027 P glycosaminoglycan catabolic process
GO:0006029 P proteoglycan metabolic process
GO:0008152 P metabolic process
GO:0008484 F sulfuric ester hydrolase activity
GO:0016250 F N-sulfoglucosamine sulfohydrolase activity
GO:0016787 F hydrolase activity
GO:0043202 C lysosomal lumen
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
728 O_BomoBR100656_complete:A_BomoBR_DN30785_c2_g3_i2
251bp
 phosphomannomutase_1_[Bombyx_mori]
GO:0004615 F phosphomannomutase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006013 P mannose metabolic process
GO:0009298 P GDP-mannose biosynthetic process
GO:0016853 F isomerase activity
GO:0043025 C neuronal cell body
GO:0046872 F metal ion binding
729 O_BomoBR100657_complete:A_BomoBR_DN30785_c2_g3_i6
370bp
 N-sulphoglucosamine_sulphohydrolase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005764 C lysosome
GO:0006027 P glycosaminoglycan catabolic process
GO:0006029 P proteoglycan metabolic process
GO:0008152 P metabolic process
GO:0008484 F sulfuric ester hydrolase activity
GO:0016250 F N-sulfoglucosamine sulfohydrolase activity
GO:0016787 F hydrolase activity
GO:0043202 C lysosomal lumen
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
730 O_BomoBR100658_complete:A_BomoBR_DN30785_c2_g3_i6
251bp
 phosphomannomutase_1_[Bombyx_mori]
GO:0004615 F phosphomannomutase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006013 P mannose metabolic process
GO:0009298 P GDP-mannose biosynthetic process
GO:0016853 F isomerase activity
GO:0043025 C neuronal cell body
GO:0046872 F metal ion binding
731 O_BomoBR100659_complete:A_BomoBR_DN30785_c2_g3_i8
257bp
 N-sulphoglucosamine_sulphohydrolase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005764 C lysosome
GO:0006027 P glycosaminoglycan catabolic process
GO:0006029 P proteoglycan metabolic process
GO:0008152 P metabolic process
GO:0008484 F sulfuric ester hydrolase activity
GO:0016250 F N-sulfoglucosamine sulfohydrolase activity
GO:0016787 F hydrolase activity
GO:0043202 C lysosomal lumen
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
732 O_BomoBR10065_complete:A_BomoBR_DN31320_c0_g1_i10
564bp
 probable_tRNA_(guanine(26)-N(2))-dimethyltransferase_isoform_X1_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0002940 P tRNA N2-guanine methylation
GO:0003723 F RNA binding
GO:0004809 F tRNA (guanine-N2-)-methyltransferase activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
733 O_BomoBR100660_complete:A_BomoBR_DN30785_c2_g7_i1
127bp
 mRNA_transport_regulator_3_isoform_X4_[Bombyx_mori]
GO:0000176 C nuclear exosome (RNase complex)
GO:0000177 C cytoplasmic exosome (RNase complex)
GO:0000178 C exosome (RNase complex)
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0016075 P rRNA catabolic process
GO:0031125 P rRNA 3'-end processing
GO:0034427 P nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
GO:0034475 P U4 snRNA 3'-end processing
GO:0071028 P nuclear mRNA surveillance
GO:0071051 P polyadenylation-dependent snoRNA 3'-end processing
734 O_BomoBR100661_complete:A_BomoBR_DN30785_c2_g7_i2
309bp
 mRNA_transport_regulator_3_isoform_X2_[Bombyx_mori]
GO:0000176 C nuclear exosome (RNase complex)
GO:0000177 C cytoplasmic exosome (RNase complex)
GO:0000178 C exosome (RNase complex)
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0016075 P rRNA catabolic process
GO:0031125 P rRNA 3'-end processing
GO:0034427 P nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
GO:0034475 P U4 snRNA 3'-end processing
GO:0071028 P nuclear mRNA surveillance
GO:0071051 P polyadenylation-dependent snoRNA 3'-end processing
735 O_BomoBR100662_complete:A_BomoBR_DN30785_c2_g3_i12
251bp
 phosphomannomutase_1_[Bombyx_mori]
GO:0004615 F phosphomannomutase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006013 P mannose metabolic process
GO:0009298 P GDP-mannose biosynthetic process
GO:0016853 F isomerase activity
GO:0043025 C neuronal cell body
GO:0046872 F metal ion binding
736 O_BomoBR100663_complete:A_BomoBR_DN30785_c2_g3_i12
135bp
 N-sulphoglucosamine_sulphohydrolase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005764 C lysosome
GO:0006027 P glycosaminoglycan catabolic process
GO:0006029 P proteoglycan metabolic process
GO:0008152 P metabolic process
GO:0008484 F sulfuric ester hydrolase activity
GO:0016250 F N-sulfoglucosamine sulfohydrolase activity
GO:0016787 F hydrolase activity
GO:0043202 C lysosomal lumen
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
737 O_BomoBR100664_complete:A_BomoBR_DN30785_c2_g3_i14
424bp
 N-sulphoglucosamine_sulphohydrolase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005764 C lysosome
GO:0006027 P glycosaminoglycan catabolic process
GO:0006029 P proteoglycan metabolic process
GO:0008152 P metabolic process
GO:0008484 F sulfuric ester hydrolase activity
GO:0016250 F N-sulfoglucosamine sulfohydrolase activity
GO:0016787 F hydrolase activity
GO:0043202 C lysosomal lumen
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
738 O_BomoBR100665_complete:A_BomoBR_DN30785_c2_g3_i14
251bp
 phosphomannomutase_1_[Bombyx_mori]
GO:0004615 F phosphomannomutase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006013 P mannose metabolic process
GO:0009298 P GDP-mannose biosynthetic process
GO:0016853 F isomerase activity
GO:0043025 C neuronal cell body
GO:0046872 F metal ion binding
739 O_BomoBR100666_complete:A_BomoBR_DN30785_c2_g4_i2
126bp
 uncharacterized_protein_LOC101737848_[Bombyx_mori]
740 O_BomoBR100667_complete:A_BomoBR_DN30785_c2_g3_i16
251bp
 phosphomannomutase_1_[Bombyx_mori]
GO:0004615 F phosphomannomutase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006013 P mannose metabolic process
GO:0009298 P GDP-mannose biosynthetic process
GO:0016853 F isomerase activity
GO:0043025 C neuronal cell body
GO:0046872 F metal ion binding
741 O_BomoBR100668_complete:A_BomoBR_DN30785_c2_g7_i4
309bp
 mRNA_transport_regulator_3_isoform_X2_[Bombyx_mori]
GO:0000176 C nuclear exosome (RNase complex)
GO:0000177 C cytoplasmic exosome (RNase complex)
GO:0000178 C exosome (RNase complex)
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0016075 P rRNA catabolic process
GO:0031125 P rRNA 3'-end processing
GO:0034427 P nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
GO:0034475 P U4 snRNA 3'-end processing
GO:0071028 P nuclear mRNA surveillance
GO:0071051 P polyadenylation-dependent snoRNA 3'-end processing
742 O_BomoBR100669_complete:A_BomoBR_DN30785_c2_g3_i18
108bp
 N-sulphoglucosamine_sulphohydrolase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005764 C lysosome
GO:0006027 P glycosaminoglycan catabolic process
GO:0006029 P proteoglycan metabolic process
GO:0008152 P metabolic process
GO:0008484 F sulfuric ester hydrolase activity
GO:0016250 F N-sulfoglucosamine sulfohydrolase activity
GO:0016787 F hydrolase activity
GO:0043202 C lysosomal lumen
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
743 O_BomoBR10066_complete:A_BomoBR_DN31320_c0_g1_i11
536bp
 probable_tRNA_(guanine(26)-N(2))-dimethyltransferase_isoform_X1_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0002940 P tRNA N2-guanine methylation
GO:0003723 F RNA binding
GO:0004809 F tRNA (guanine-N2-)-methyltransferase activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
744 O_BomoBR100670_complete:A_BomoBR_DN30785_c2_g9_i1
293bp
 nitric_oxide_synthase-interacting_protein_homolog_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0043086 P negative regulation of catalytic activity
GO:0044822 F RNA binding
GO:0050999 P regulation of nitric-oxide synthase activity
GO:0051001 P negative regulation of nitric-oxide synthase activity
GO:0071013 C catalytic step 2 spliceosome
745 O_BomoBR100671_complete:A_BomoBR_DN30785_c2_g3_i20
139bp
 N-sulphoglucosamine_sulphohydrolase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005764 C lysosome
GO:0006027 P glycosaminoglycan catabolic process
GO:0006029 P proteoglycan metabolic process
GO:0008152 P metabolic process
GO:0008484 F sulfuric ester hydrolase activity
GO:0016250 F N-sulfoglucosamine sulfohydrolase activity
GO:0016787 F hydrolase activity
GO:0043202 C lysosomal lumen
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
746 O_BomoBR100672_complete:A_BomoBR_DN30785_c2_g3_i20
121bp
 unnamed_protein_product_[Mus_musculus]
747 O_BomoBR100673_complete:A_BomoBR_DN30738_c0_g2_i1
945bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
748 O_BomoBR100674_5prime_partial:A_BomoBR_DN30738_c0_g2_i1
154bp
 uncharacterized_protein_LOC101740049_[Bombyx_mori]
749 O_BomoBR100675_complete:A_BomoBR_DN30738_c0_g2_i2
945bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
750 O_BomoBR100676_internal:A_BomoBR_DN30709_c3_g1_i1
145bp
 rootletin_[Bombyx_mori]
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