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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2371 O_BomoBR102134_complete:A_BomoBR_DN29837_c4_g1_i15
244bp
 proton-coupled_folate_transporter-like_[Bombyx_mori]
GO:0005542 F folic acid binding
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
2372 O_BomoBR102135_complete:A_BomoBR_DN29837_c4_g1_i16
174bp
 proton-coupled_folate_transporter-like_[Bombyx_mori]
2373 O_BomoBR102136_complete:A_BomoBR_DN29837_c4_g1_i17
174bp
 proton-coupled_folate_transporter-like_[Bombyx_mori]
2374 O_BomoBR102137_3prime_partial:A_BomoBR_DN29837_c4_g1_i18
268bp
 proton-coupled_folate_transporter-like_[Bombyx_mori]
GO:0005542 F folic acid binding
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
2375 O_BomoBR102138_complete:A_BomoBR_DN29837_c4_g1_i20
543bp
 proton-coupled_folate_transporter-like_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
2376 O_BomoBR102139_complete:A_BomoBR_DN29837_c4_g1_i21
155bp
 proton-coupled_folate_transporter-like_[Bombyx_mori]
GO:0005542 F folic acid binding
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
2377 O_BomoBR10213_complete:A_BomoBR_DN31374_c5_g2_i9
225bp
 piwi-like_protein,_partial_[Bombyx_mori]
GO:0000335 P negative regulation of transposition, DNA-mediated
GO:0000785 C chromatin
GO:0000791 C euchromatin
GO:0001709 P cell fate determination
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005700 C polytene chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006342 P heterochromatin assembly
GO:0007275 P multicellular organism development
GO:0007279 P pole cell formation
GO:0010369 C chromocenter
GO:0010529 P negative regulation of transposition
GO:0016246 P RNA interference
GO:0016441 P posttranscriptional gene silencing
GO:0030718 P germ-line stem cell population maintenance
GO:0031047 P gene silencing by RNA
GO:0031933 C obsolete telomeric heterochromatin
GO:0042078 P germ-line stem cell division
GO:0048132 P female germ-line stem cell asymmetric division
GO:0048133 P male germ-line stem cell asymmetric division
GO:0060213 P positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
GO:0070725 C Yb body
GO:0070868 P obsolete heterochromatin organization involved in chromatin silencing
GO:0090309 P positive regulation of DNA methylation-dependent heterochromatin assembly
2378 O_BomoBR102140_complete:A_BomoBR_DN29837_c4_g1_i22
174bp
 proton-coupled_folate_transporter-like_[Bombyx_mori]
2379 O_BomoBR102141_internal:A_BomoBR_DN29837_c4_g2_i5
104bp
 hypothetical_protein_[Acinetobacter_baumannii]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
2380 O_BomoBR102142_complete:A_BomoBR_DN29837_c4_g1_i23
157bp
 proton-coupled_folate_transporter-like_[Bombyx_mori]
2381 O_BomoBR102143_complete:A_BomoBR_DN29837_c4_g1_i24
342bp
 proton-coupled_folate_transporter-like_[Bombyx_mori]
2382 O_BomoBR102144_3prime_partial:A_BomoBR_DN29837_c4_g1_i25
170bp
 proton-coupled_folate_transporter-like_[Bombyx_mori]
GO:0005542 F folic acid binding
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
2383 O_BomoBR102145_complete:A_BomoBR_DN29837_c4_g1_i26
244bp
 proton-coupled_folate_transporter-like_[Bombyx_mori]
GO:0005542 F folic acid binding
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
2384 O_BomoBR102146_complete:A_BomoBR_DN29837_c4_g1_i26
136bp
 proton-coupled_folate_transporter-like_[Bombyx_mori]
2385 O_BomoBR102147_complete:A_BomoBR_DN29853_c3_g1_i1
1721bp
 chromodomain-helicase-DNA-binding_protein_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008026 F helicase activity
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
2386 O_BomoBR102148_complete:A_BomoBR_DN29853_c3_g1_i1
113bp
2387 O_BomoBR102149_complete:A_BomoBR_DN29853_c3_g1_i1
111bp
2388 O_BomoBR10214_complete:A_BomoBR_DN31374_c5_g1_i3
406bp
 ATP-dependent_RNA_helicase_DDX42_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
2389 O_BomoBR102150_complete:A_BomoBR_DN29853_c3_g1_i1
102bp
2390 O_BomoBR102151_complete:A_BomoBR_DN29853_c3_g2_i1
182bp
 formin-like_protein_5_isoform_X2_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
2391 O_BomoBR102152_complete:A_BomoBR_DN29853_c3_g2_i2
346bp
 formin-like_protein_5_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
2392 O_BomoBR102153_complete:A_BomoBR_DN29853_c3_g1_i2
1744bp
 chromodomain-helicase-DNA-binding_protein_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008026 F helicase activity
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
2393 O_BomoBR102154_complete:A_BomoBR_DN29853_c3_g1_i2
113bp
2394 O_BomoBR102155_complete:A_BomoBR_DN29853_c3_g1_i2
102bp
2395 O_BomoBR102156_3prime_partial:A_BomoBR_DN29853_c3_g1_i3
618bp
 chromodomain-helicase-DNA-binding_protein_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008026 F helicase activity
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
2396 O_BomoBR102157_complete:A_BomoBR_DN29853_c3_g1_i3
113bp
2397 O_BomoBR102158_complete:A_BomoBR_DN29853_c3_g2_i3
272bp
 formin-like_protein_5_isoform_X2_[Bombyx_mori]
2398 O_BomoBR102159_complete:A_BomoBR_DN29853_c3_g2_i4
348bp
 formin-like_protein_5_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
2399 O_BomoBR10215_complete:A_BomoBR_DN31374_c5_g1_i3
162bp
 hypothetical_protein_AX774_g2527,_partial_[Zancudomyces_culisetae]
2400 O_BomoBR102160_complete:A_BomoBR_DN29853_c3_g2_i5
323bp
 formin-like_protein_5_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008150 P biological_process
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
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