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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2341 O_BomoBR102107_5prime_partial:A_BomoBR_DN29842_c1_g2_i3
378bp
 ALK_tyrosine_kinase_receptor_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0008283 P cell population proliferation
GO:0010666 P positive regulation of cardiac muscle cell apoptotic process
GO:0010976 P positive regulation of neuron projection development
GO:0014065 P phosphatidylinositol 3-kinase signaling
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0043066 P negative regulation of apoptotic process
GO:0071300 P cellular response to retinoic acid
2342 O_BomoBR102108_complete:A_BomoBR_DN29842_c1_g2_i3
165bp
2343 O_BomoBR102109_internal:A_BomoBR_DN29842_c1_g5_i1
212bp
 ALK_tyrosine_kinase_receptor_[Bombyx_mori]
2344 O_BomoBR10210_complete:A_BomoBR_DN31374_c5_g2_i7
634bp
 aubergine_protein_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0001556 P oocyte maturation
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005875 C microtubule associated complex
GO:0006342 P heterochromatin assembly
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0007076 P mitotic chromosome condensation
GO:0007275 P multicellular organism development
GO:0007279 P pole cell formation
GO:0007317 P regulation of pole plasm oskar mRNA localization
GO:0007318 P pole plasm protein localization
GO:0010529 P negative regulation of transposition
GO:0016246 P RNA interference
GO:0030154 P cell differentiation
GO:0030423 P targeting of mRNA for destruction involved in RNA interference
GO:0030717 P oocyte karyosome formation
GO:0031047 P gene silencing by RNA
GO:0034584 F piRNA binding
GO:0035282 P segmentation
GO:0043186 C P granule
GO:0045089 P positive regulation of innate immune response
GO:0046011 P regulation of oskar mRNA translation
GO:0046012 P positive regulation of oskar mRNA translation
GO:0046594 P maintenance of pole plasm mRNA location
GO:0046843 P dorsal appendage formation
GO:0048477 P oogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0060213 P positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
2345 O_BomoBR102110_3prime_partial:A_BomoBR_DN29842_c1_g5_i1
104bp
2346 O_BomoBR102111_internal:A_BomoBR_DN29842_c1_g5_i2
119bp
2347 O_BomoBR102112_complete:A_BomoBR_DN29842_c1_g2_i6
359bp
 ALK_tyrosine_kinase_receptor_[Bombyx_mori]
2348 O_BomoBR102113_complete:A_BomoBR_DN29842_c1_g2_i6
165bp
2349 O_BomoBR102114_5prime_partial:A_BomoBR_DN29842_c1_g8_i1
521bp
 uncharacterized_protein_LOC101743076_[Bombyx_mori]
2350 O_BomoBR102115_internal:A_BomoBR_DN29842_c1_g5_i3
136bp
 ALK_tyrosine_kinase_receptor_[Bombyx_mori]
2351 O_BomoBR102116_complete:A_BomoBR_DN29842_c1_g2_i8
311bp
 ALK_tyrosine_kinase_receptor_[Bombyx_mori]
2352 O_BomoBR102117_complete:A_BomoBR_DN29842_c1_g2_i8
165bp
2353 O_BomoBR102118_5prime_partial:A_BomoBR_DN29842_c1_g2_i9
112bp
 ALK_tyrosine_kinase_receptor_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000187 P obsolete activation of MAPK activity
GO:0004672 F protein kinase activity
GO:0004704 F NF-kappaB-inducing kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007399 P nervous system development
GO:0008283 P cell population proliferation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0038061 P NIK/NF-kappaB signaling
GO:0042802 F identical protein binding
GO:0042981 P regulation of apoptotic process
GO:0043234 C protein-containing complex
GO:0046777 P protein autophosphorylation
GO:0048666 P neuron development
GO:0051092 P positive regulation of NF-kappaB transcription factor activity
GO:0070062 C extracellular exosome
2354 O_BomoBR102119_complete:A_BomoBR_DN29842_c1_g2_i10
125bp
 ALK_tyrosine_kinase_receptor_[Bombyx_mori]
2355 O_BomoBR10211_complete:A_BomoBR_DN31374_c5_g2_i7
128bp
2356 O_BomoBR102120_complete:A_BomoBR_DN29842_c1_g2_i11
128bp
2357 O_BomoBR102121_5prime_partial:A_BomoBR_DN29842_c1_g2_i12
490bp
 ALK_tyrosine_kinase_receptor_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000187 P obsolete activation of MAPK activity
GO:0004672 F protein kinase activity
GO:0004704 F NF-kappaB-inducing kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007399 P nervous system development
GO:0008283 P cell population proliferation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0038061 P NIK/NF-kappaB signaling
GO:0042802 F identical protein binding
GO:0042981 P regulation of apoptotic process
GO:0043234 C protein-containing complex
GO:0046777 P protein autophosphorylation
GO:0048666 P neuron development
GO:0051092 P positive regulation of NF-kappaB transcription factor activity
GO:0070062 C extracellular exosome
2358 O_BomoBR102122_complete:A_BomoBR_DN29842_c1_g2_i12
165bp
2359 O_BomoBR102123_complete:A_BomoBR_DN29842_c1_g2_i12
112bp
2360 O_BomoBR102124_complete:A_BomoBR_DN29837_c4_g1_i1
589bp
 proton-coupled_folate_transporter-like_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
2361 O_BomoBR102125_complete:A_BomoBR_DN29837_c4_g1_i3
200bp
 proton-coupled_folate_transporter-like_[Bombyx_mori]
2362 O_BomoBR102126_complete:A_BomoBR_DN29837_c4_g1_i4
342bp
 proton-coupled_folate_transporter-like_[Bombyx_mori]
2363 O_BomoBR102127_complete:A_BomoBR_DN29837_c4_g1_i4
244bp
 proton-coupled_folate_transporter-like_[Bombyx_mori]
GO:0005542 F folic acid binding
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
2364 O_BomoBR102128_complete:A_BomoBR_DN29837_c4_g1_i5
338bp
 proton-coupled_folate_transporter-like_[Bombyx_mori]
GO:0005542 F folic acid binding
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
2365 O_BomoBR102129_complete:A_BomoBR_DN29837_c4_g1_i8
383bp
 proton-coupled_folate_transporter-like_[Bombyx_mori]
GO:0005542 F folic acid binding
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
2366 O_BomoBR10212_complete:A_BomoBR_DN31374_c5_g9_i1
152bp
 ubiquitin-conjugating_enzyme_E2-17_kDa_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0000422 P autophagy of mitochondrion
GO:0000790 C chromatin
GO:0002039 F p53 binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007052 P mitotic spindle organization
GO:0016567 P protein ubiquitination
GO:0016574 P histone ubiquitination
GO:0016740 F transferase activity
GO:0019904 F protein domain specific binding
GO:0031625 F ubiquitin protein ligase binding
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032456 P endocytic recycling
GO:0033503 C HULC complex
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043066 P negative regulation of apoptotic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043518 P negative regulation of DNA damage response, signal transduction by p53 class mediator
GO:0051297 P centrosome cycle
GO:0051299 P centrosome separation
GO:0061630 F ubiquitin protein ligase activity
GO:0061631 F ubiquitin conjugating enzyme activity
GO:1902166 P negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
2367 O_BomoBR102130_complete:A_BomoBR_DN29837_c4_g1_i9
200bp
 proton-coupled_folate_transporter-like_[Bombyx_mori]
GO:0005542 F folic acid binding
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
2368 O_BomoBR102131_complete:A_BomoBR_DN29837_c4_g1_i10
544bp
 proton-coupled_folate_transporter-like_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
2369 O_BomoBR102132_complete:A_BomoBR_DN29837_c4_g1_i13
406bp
 proton-coupled_folate_transporter-like_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
2370 O_BomoBR102133_complete:A_BomoBR_DN29837_c4_g1_i14
340bp
 proton-coupled_folate_transporter-like_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
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