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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
841 O_BomoOtmSK10758_complete:A_BomoOtmSK_comp13632_c0_seq4
146bp
842 O_BomoOtmSK10759_complete:A_BomoOtmSK_comp13635_c0_seq1
105bp
843 O_BomoOtmSK1075_complete:A_BomoOtmSK_comp4551_c0_seq1
148bp
 uncharacterized_protein_LOC101744754_[Bombyx_mori]
GO:0016491 F oxidoreductase activity
GO:0016647 F oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor
GO:0050131 F N-methyl-L-amino-acid oxidase activity
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
844 O_BomoOtmSK10760_3prime_partial:A_BomoOtmSK_comp13636_c0_seq1
339bp
 splicing_factor_3A_subunit_1_isoform_X2_[Bombyx_mori]
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005684 C U2-type spliceosomal complex
GO:0005686 C U2 snRNP
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
GO:0071004 C U2-type prespliceosome
GO:0071013 C catalytic step 2 spliceosome
845 O_BomoOtmSK10761_5prime_partial:A_BomoOtmSK_comp13636_c0_seq1
150bp
846 O_BomoOtmSK10762_3prime_partial:A_BomoOtmSK_comp13636_c0_seq1
130bp
847 O_BomoOtmSK10763_complete:A_BomoOtmSK_comp13636_c0_seq1
108bp
848 O_BomoOtmSK10764_5prime_partial:A_BomoOtmSK_comp13636_c0_seq1
102bp
849 O_BomoOtmSK10765_3prime_partial:A_BomoOtmSK_comp13636_c0_seq2
441bp
 splicing_factor_3A_subunit_1_isoform_X1_[Bombyx_mori]
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005684 C U2-type spliceosomal complex
GO:0005686 C U2 snRNP
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
GO:0071004 C U2-type prespliceosome
GO:0071013 C catalytic step 2 spliceosome
850 O_BomoOtmSK10766_5prime_partial:A_BomoOtmSK_comp13636_c0_seq2
150bp
851 O_BomoOtmSK10767_3prime_partial:A_BomoOtmSK_comp13636_c0_seq2
130bp
852 O_BomoOtmSK10768_complete:A_BomoOtmSK_comp13636_c0_seq2
108bp
853 O_BomoOtmSK10769_5prime_partial:A_BomoOtmSK_comp13636_c0_seq2
102bp
854 O_BomoOtmSK1076_3prime_partial:A_BomoOtmSK_comp4551_c0_seq2
358bp
 uncharacterized_protein_LOC101744754_[Bombyx_mori]
GO:0016491 F oxidoreductase activity
GO:0016647 F oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor
GO:0050131 F N-methyl-L-amino-acid oxidase activity
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
855 O_BomoOtmSK10770_3prime_partial:A_BomoOtmSK_comp13638_c0_seq1
279bp
 zinc_finger_protein_665_isoform_X1_[Bombyx_mori]
GO:0001085 F RNA polymerase II-specific DNA-binding transcription factor binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0016363 C nuclear matrix
GO:0030097 P hemopoiesis
GO:0030854 P positive regulation of granulocyte differentiation
GO:0045646 P regulation of erythrocyte differentiation
GO:0046872 F metal ion binding
GO:0051569 P regulation of histone H3-K4 methylation
GO:0051572 P negative regulation of histone H3-K4 methylation
GO:0051574 P positive regulation of histone H3-K9 methylation
856 O_BomoOtmSK10771_5prime_partial:A_BomoOtmSK_comp13638_c1_seq1
276bp
 zinc_finger_protein_665_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
857 O_BomoOtmSK10772_5prime_partial:A_BomoOtmSK_comp13638_c1_seq3
276bp
 zinc_finger_protein_665_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
858 O_BomoOtmSK10773_5prime_partial:A_BomoOtmSK_comp13638_c1_seq4
276bp
 zinc_finger_protein_665_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
859 O_BomoOtmSK10774_complete:A_BomoOtmSK_comp13639_c0_seq1
189bp
 mpv17-like_protein_[Bombyx_mori]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
860 O_BomoOtmSK10775_3prime_partial:A_BomoOtmSK_comp13641_c0_seq1
856bp
 myosin-VIIa_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0007605 P sensory perception of sound
GO:0008152 P metabolic process
GO:0008407 P chaeta morphogenesis
GO:0016459 C myosin complex
GO:0030048 P actin filament-based movement
GO:0030898 F microfilament motor activity
GO:0032027 F myosin light chain binding
GO:0035317 P imaginal disc-derived wing hair organization
GO:0048800 P antennal morphogenesis
861 O_BomoOtmSK10776_5prime_partial:A_BomoOtmSK_comp13642_c0_seq1
396bp
 stearoyl-CoA_desaturase_5-like_[Bombyx_mori]
GO:0004768 F stearoyl-CoA 9-desaturase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0006636 P unsaturated fatty acid biosynthetic process
GO:0006641 P triglyceride metabolic process
GO:0008610 P lipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016717 F oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0032896 F palmitoyl-CoA 9-desaturase activity
GO:0033561 P regulation of water loss via skin
GO:0034434 P sterol esterification
GO:0034435 P cholesterol esterification
GO:0043231 C intracellular membrane-bounded organelle
GO:0044130 P obsolete negative regulation of growth of symbiont in host
GO:0046872 F metal ion binding
GO:0048733 P sebaceous gland development
GO:0050830 P defense response to Gram-positive bacterium
GO:0050872 P white fat cell differentiation
GO:0050873 P brown fat cell differentiation
GO:0055114 P obsolete oxidation-reduction process
GO:0070542 P response to fatty acid
GO:1903699 P tarsal gland development
GO:1903966 P monounsaturated fatty acid biosynthetic process
862 O_BomoOtmSK10777_complete:A_BomoOtmSK_comp13643_c0_seq3
257bp
 3-hydroxyacyl-CoA_dehydrogenase_type-2_[Bombyx_mori]
GO:0003857 F 3-hydroxyacyl-CoA dehydrogenase activity
GO:0004303 F estradiol 17-beta-dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006631 P fatty acid metabolic process
GO:0006637 P acyl-CoA metabolic process
GO:0008033 P tRNA processing
GO:0008152 P metabolic process
GO:0008202 P steroid metabolic process
GO:0008205 P ecdysone metabolic process
GO:0008209 P androgen metabolic process
GO:0008210 P estrogen metabolic process
GO:0016229 F steroid dehydrogenase activity
GO:0016491 F oxidoreductase activity
GO:0018454 F acetoacetyl-CoA reductase activity
GO:0030283 F testosterone dehydrogenase [NAD(P)] activity
GO:0047015 F 3-hydroxy-2-methylbutyryl-CoA dehydrogenase activity
GO:0047022 F 7-beta-hydroxysteroid dehydrogenase (NADP+) activity
GO:0047035 F testosterone dehydrogenase (NAD+) activity
GO:0055114 P obsolete oxidation-reduction process
863 O_BomoOtmSK10778_5prime_partial:A_BomoOtmSK_comp13644_c0_seq1
195bp
 uncharacterized_protein_LOC101743084_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005923 C bicellular tight junction
GO:0012505 C endomembrane system
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0035556 P intracellular signal transduction
GO:0042552 P myelination
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
864 O_BomoOtmSK10779_complete:A_BomoOtmSK_comp13648_c0_seq1
290bp
 sulfatase-modifying_factor_1_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006687 P glycosphingolipid metabolic process
GO:0016491 F oxidoreductase activity
GO:0042803 F protein homodimerization activity
GO:0043687 P post-translational protein modification
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
865 O_BomoOtmSK1077_5prime_partial:A_BomoOtmSK_comp4552_c0_seq1
463bp
 GTPase-activating_protein_isoform_X2_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007165 P signal transduction
GO:0007265 P Ras protein signal transduction
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008293 P torso signaling pathway
GO:0008595 P anterior/posterior axis specification, embryo
GO:0016321 P female meiosis chromosome segregation
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0031235 C intrinsic component of the cytoplasmic side of the plasma membrane
GO:0035556 P intracellular signal transduction
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0045678 P positive regulation of R7 cell differentiation
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046872 F metal ion binding
866 O_BomoOtmSK10780_complete:A_BomoOtmSK_comp13648_c0_seq2
332bp
 sulfatase-modifying_factor_1_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006687 P glycosphingolipid metabolic process
GO:0016491 F oxidoreductase activity
GO:0042803 F protein homodimerization activity
GO:0043687 P post-translational protein modification
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
867 O_BomoOtmSK10781_3prime_partial:A_BomoOtmSK_comp13649_c0_seq1
220bp
 splicing_factor_U2af_38_kDa_subunit_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005686 C U2 snRNP
GO:0006397 P mRNA processing
GO:0007052 P mitotic spindle organization
GO:0008187 F poly-pyrimidine tract binding
GO:0008380 P RNA splicing
GO:0010906 P regulation of glucose metabolic process
GO:0046872 F metal ion binding
GO:0071011 C precatalytic spliceosome
GO:0089701 C U2AF complex
868 O_BomoOtmSK10782_complete:A_BomoOtmSK_comp13651_c0_seq1
166bp
 uncharacterized_protein_LOC101740515_isoform_X1_[Bombyx_mori]
869 O_BomoOtmSK10783_3prime_partial:A_BomoOtmSK_comp13652_c0_seq1
362bp
 WD_repeat-containing_protein_19_isoform_X3_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0001701 P in utero embryonic development
GO:0003674 F molecular_function
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0007224 P smoothened signaling pathway
GO:0008406 P gonad development
GO:0030030 P cell projection organization
GO:0030326 P embryonic limb morphogenesis
GO:0030991 C intraciliary transport particle A
GO:0031076 P embryonic camera-type eye development
GO:0031513 C non-motile cilium
GO:0031514 C motile cilium
GO:0032391 C photoreceptor connecting cilium
GO:0035721 P intraciliary retrograde transport
GO:0042384 P cilium assembly
GO:0042471 P ear morphogenesis
GO:0042995 C cell projection
GO:0048701 P embryonic cranial skeleton morphogenesis
GO:0050877 P nervous system process
GO:0055123 P digestive system development
GO:0060271 P cilium assembly
GO:0060830 P ciliary receptor clustering involved in smoothened signaling pathway
GO:0060831 P smoothened signaling pathway involved in dorsal/ventral neural tube patterning
GO:0061055 P myotome development
GO:0061512 P protein localization to cilium
870 O_BomoOtmSK10784_3prime_partial:A_BomoOtmSK_comp13652_c0_seq2
358bp
 WD_repeat-containing_protein_19_isoform_X3_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0001701 P in utero embryonic development
GO:0003674 F molecular_function
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0007224 P smoothened signaling pathway
GO:0008406 P gonad development
GO:0030030 P cell projection organization
GO:0030326 P embryonic limb morphogenesis
GO:0030991 C intraciliary transport particle A
GO:0031076 P embryonic camera-type eye development
GO:0031513 C non-motile cilium
GO:0031514 C motile cilium
GO:0032391 C photoreceptor connecting cilium
GO:0035721 P intraciliary retrograde transport
GO:0042384 P cilium assembly
GO:0042471 P ear morphogenesis
GO:0042995 C cell projection
GO:0048701 P embryonic cranial skeleton morphogenesis
GO:0050877 P nervous system process
GO:0055123 P digestive system development
GO:0060271 P cilium assembly
GO:0060830 P ciliary receptor clustering involved in smoothened signaling pathway
GO:0060831 P smoothened signaling pathway involved in dorsal/ventral neural tube patterning
GO:0061055 P myotome development
GO:0061512 P protein localization to cilium
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