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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
871 O_BomoOtmSK10785_3prime_partial:A_BomoOtmSK_comp13652_c0_seq3
424bp
 WD_repeat-containing_protein_19_isoform_X1_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0001701 P in utero embryonic development
GO:0003674 F molecular_function
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0007224 P smoothened signaling pathway
GO:0008406 P gonad development
GO:0030030 P cell projection organization
GO:0030326 P embryonic limb morphogenesis
GO:0030991 C intraciliary transport particle A
GO:0031076 P embryonic camera-type eye development
GO:0031513 C non-motile cilium
GO:0031514 C motile cilium
GO:0032391 C photoreceptor connecting cilium
GO:0035721 P intraciliary retrograde transport
GO:0042384 P cilium assembly
GO:0042471 P ear morphogenesis
GO:0042995 C cell projection
GO:0048701 P embryonic cranial skeleton morphogenesis
GO:0050877 P nervous system process
GO:0055123 P digestive system development
GO:0060271 P cilium assembly
GO:0060830 P ciliary receptor clustering involved in smoothened signaling pathway
GO:0060831 P smoothened signaling pathway involved in dorsal/ventral neural tube patterning
GO:0061055 P myotome development
GO:0061512 P protein localization to cilium
872 O_BomoOtmSK10786_3prime_partial:A_BomoOtmSK_comp13652_c0_seq4
420bp
 WD_repeat-containing_protein_19_isoform_X1_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0001701 P in utero embryonic development
GO:0003674 F molecular_function
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0007224 P smoothened signaling pathway
GO:0008406 P gonad development
GO:0030030 P cell projection organization
GO:0030326 P embryonic limb morphogenesis
GO:0030991 C intraciliary transport particle A
GO:0031076 P embryonic camera-type eye development
GO:0031513 C non-motile cilium
GO:0031514 C motile cilium
GO:0032391 C photoreceptor connecting cilium
GO:0035721 P intraciliary retrograde transport
GO:0042384 P cilium assembly
GO:0042471 P ear morphogenesis
GO:0042995 C cell projection
GO:0048701 P embryonic cranial skeleton morphogenesis
GO:0050877 P nervous system process
GO:0055123 P digestive system development
GO:0060271 P cilium assembly
GO:0060830 P ciliary receptor clustering involved in smoothened signaling pathway
GO:0060831 P smoothened signaling pathway involved in dorsal/ventral neural tube patterning
GO:0061055 P myotome development
GO:0061512 P protein localization to cilium
873 O_BomoOtmSK10787_5prime_partial:A_BomoOtmSK_comp13653_c0_seq1
106bp
 uncharacterized_protein_LOC101742672_isoform_X1_[Bombyx_mori]
874 O_BomoOtmSK10788_5prime_partial:A_BomoOtmSK_comp13653_c0_seq2
236bp
 uncharacterized_protein_LOC101742672_isoform_X3_[Bombyx_mori]
875 O_BomoOtmSK10789_complete:A_BomoOtmSK_comp13653_c0_seq4
218bp
 uncharacterized_protein_LOC101742672_isoform_X3_[Bombyx_mori]
876 O_BomoOtmSK1078_complete:A_BomoOtmSK_comp4552_c0_seq1
176bp
877 O_BomoOtmSK10790_complete:A_BomoOtmSK_comp13653_c0_seq5
120bp
 PHD_finger_protein_20_isoform_X2_[Bombyx_mori]
878 O_BomoOtmSK10791_complete:A_BomoOtmSK_comp13655_c0_seq1
332bp
 LOW_QUALITY_PROTEIN:_CD2_antigen_cytoplasmic_tail-binding_protein_2_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005682 C U5 snRNP
GO:0006909 P phagocytosis
GO:0007275 P multicellular organism development
GO:0019233 P sensory perception of pain
GO:0022416 P chaeta development
GO:0035220 P wing disc development
GO:0042060 P wound healing
GO:0045742 P positive regulation of epidermal growth factor receptor signaling pathway
GO:0048749 P compound eye development
GO:0090303 P positive regulation of wound healing
879 O_BomoOtmSK10792_complete:A_BomoOtmSK_comp13655_c0_seq1
132bp
880 O_BomoOtmSK10793_complete:A_BomoOtmSK_comp13656_c0_seq1
779bp
 carnitine_O-palmitoyltransferase_1,_liver_isoform_isoform_X1_[Bombyx_mori]
GO:0001676 P long-chain fatty acid metabolic process
GO:0004095 F carnitine O-palmitoyltransferase activity
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005743 C mitochondrial inner membrane
GO:0006006 P glucose metabolic process
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0006641 P triglyceride metabolic process
GO:0006810 P transport
GO:0006853 P carnitine shuttle
GO:0007623 P circadian rhythm
GO:0009437 P carnitine metabolic process
GO:0014070 P response to organic cyclic compound
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0030855 P epithelial cell differentiation
GO:0031307 C integral component of mitochondrial outer membrane
GO:0032000 P positive regulation of fatty acid beta-oxidation
GO:0042493 P response to xenobiotic stimulus
GO:0042755 P eating behavior
GO:0042802 F identical protein binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0046320 P regulation of fatty acid oxidation
GO:0050796 P regulation of insulin secretion
GO:0051260 P protein homooligomerization
GO:0071398 P cellular response to fatty acid
GO:1990698 F palmitoleoyltransferase activity
881 O_BomoOtmSK10794_3prime_partial:A_BomoOtmSK_comp13658_c0_seq1
850bp
 LOW_QUALITY_PROTEIN:_probable_phospholipid-transporting_ATPase_VD_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004012 F ATPase-coupled intramembrane lipid transporter activity
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006812 P cation transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0015914 P phospholipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0045332 P phospholipid translocation
GO:0046872 F metal ion binding
882 O_BomoOtmSK10795_complete:A_BomoOtmSK_comp13658_c0_seq1
280bp
 LOW_QUALITY_PROTEIN:_probable_phospholipid-transporting_ATPase_VD_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004012 F ATPase-coupled intramembrane lipid transporter activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006812 P cation transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0015914 P phospholipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0034220 P ion transmembrane transport
GO:0045332 P phospholipid translocation
GO:0046872 F metal ion binding
883 O_BomoOtmSK10796_complete:A_BomoOtmSK_comp13658_c0_seq1
153bp
 hypothetical_protein_AX774_g4572_[Zancudomyces_culisetae]
884 O_BomoOtmSK10797_complete:A_BomoOtmSK_comp13658_c0_seq1
139bp
885 O_BomoOtmSK10798_complete:A_BomoOtmSK_comp13658_c0_seq1
124bp
 protein-tyrosine-phosphatase_[Salinispora_pacifica]
886 O_BomoOtmSK10799_complete:A_BomoOtmSK_comp13658_c0_seq1
113bp
887 O_BomoOtmSK1079_complete:A_BomoOtmSK_comp4552_c0_seq1
101bp
888 O_BomoOtmSK107_3prime_partial:A_BomoOtmSK_comp408_c0_seq1
108bp
889 O_BomoOtmSK10800_5prime_partial:A_BomoOtmSK_comp13659_c0_seq1
476bp
 low_molecular_mass_30_kDa_lipoprotein_19G1-like_[Bombyx_mori]
GO:0005576 C extracellular region
890 O_BomoOtmSK10801_internal:A_BomoOtmSK_comp13660_c0_seq1
181bp
 uncharacterized_protein_LOC101743413_isoform_X2_[Bombyx_mori]
891 O_BomoOtmSK10802_5prime_partial:A_BomoOtmSK_comp13660_c0_seq1
171bp
892 O_BomoOtmSK10803_internal:A_BomoOtmSK_comp13660_c1_seq1
788bp
 uncharacterized_protein_LOC101743413_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
893 O_BomoOtmSK10804_complete:A_BomoOtmSK_comp13660_c1_seq1
107bp
894 O_BomoOtmSK10805_complete:A_BomoOtmSK_comp13661_c0_seq1
163bp
 U1_small_nuclear_ribonucleoprotein_C_[Bombyx_mori]
GO:0000243 C commitment complex
GO:0000387 P spliceosomal snRNP assembly
GO:0000395 P mRNA 5'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0008270 F zinc ion binding
GO:0030529 C ribonucleoprotein complex
GO:0030619 F U1 snRNA binding
GO:0046872 F metal ion binding
GO:0071004 C U2-type prespliceosome
895 O_BomoOtmSK10806_complete:A_BomoOtmSK_comp13661_c0_seq1
139bp
896 O_BomoOtmSK10807_complete:A_BomoOtmSK_comp13661_c0_seq1
104bp
897 O_BomoOtmSK10808_5prime_partial:A_BomoOtmSK_comp13663_c0_seq1
104bp
 ATP-binding_cassette_sub-family_A_member_3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005215 F transporter activity
GO:0005319 F lipid transporter activity
GO:0005524 F ATP binding
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042493 P response to xenobiotic stimulus
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0044267 P cellular protein metabolic process
GO:0051384 P response to glucocorticoid
GO:0055085 P transmembrane transport
GO:0097208 C alveolar lamellar body
GO:0097232 C lamellar body membrane
GO:0097233 C alveolar lamellar body membrane
898 O_BomoOtmSK10809_5prime_partial:A_BomoOtmSK_comp13665_c0_seq1
129bp
 uncharacterized_protein_LOC101741630_isoform_X6_[Bombyx_mori]
899 O_BomoOtmSK1080_3prime_partial:A_BomoOtmSK_comp4558_c0_seq1
156bp
900 O_BomoOtmSK10810_complete:A_BomoOtmSK_comp13665_c0_seq2
323bp
 uncharacterized_protein_LOC101741630_isoform_X2_[Bombyx_mori]
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