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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
811 O_BomoOtmSK10730_internal:A_BomoOtmSK_comp13622_c0_seq1
689bp
 LOW_QUALITY_PROTEIN:_PHD_and_RING_finger_domain-containing_protein_1_[Bombyx_mori]
812 O_BomoOtmSK10731_3prime_partial:A_BomoOtmSK_comp13622_c0_seq1
304bp
 LOW_QUALITY_PROTEIN:_PHD_and_RING_finger_domain-containing_protein_1_[Bombyx_mori]
813 O_BomoOtmSK10732_5prime_partial:A_BomoOtmSK_comp13622_c0_seq1
236bp
814 O_BomoOtmSK10733_5prime_partial:A_BomoOtmSK_comp13622_c0_seq1
105bp
815 O_BomoOtmSK10734_5prime_partial:A_BomoOtmSK_comp13623_c0_seq1
849bp
 adenomatous_polyposis_coli_protein_isoform_X1_[Bombyx_mori]
816 O_BomoOtmSK10735_3prime_partial:A_BomoOtmSK_comp13623_c0_seq1
140bp
817 O_BomoOtmSK10736_complete:A_BomoOtmSK_comp13625_c0_seq1
188bp
 N-acetyltransferase_[Bombyx_mori]
GO:0004402 F histone acetyltransferase activity
GO:0004596 F peptide alpha-N-acetyltransferase activity
GO:0005737 C cytoplasm
GO:0006474 P N-terminal protein amino acid acetylation
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0008080 F N-acetyltransferase activity
GO:0008280 C cohesin complex
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0031248 C protein acetyltransferase complex
GO:0046331 P lateral inhibition
GO:0048812 P neuron projection morphogenesis
818 O_BomoOtmSK10737_3prime_partial:A_BomoOtmSK_comp13626_c0_seq1
996bp
 leucine--tRNA_ligase,_cytoplasmic_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004823 F leucine-tRNA ligase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006429 P leucyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0016874 F ligase activity
819 O_BomoOtmSK10738_5prime_partial:A_BomoOtmSK_comp13626_c0_seq1
143bp
820 O_BomoOtmSK10739_internal:A_BomoOtmSK_comp13628_c0_seq1
307bp
 protein_kinase_C-binding_protein_1-like_isoform_X2_[Helicoverpa_armigera]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001106 F transcription corepressor activity
GO:0003682 F chromatin binding
GO:0003712 F transcription coregulator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0042393 F histone binding
GO:0043197 C dendritic spine
GO:0043198 C dendritic shaft
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0051491 P positive regulation of filopodium assembly
GO:0060999 P positive regulation of dendritic spine development
GO:0070491 F DNA-binding transcription factor binding
GO:0098815 P modulation of excitatory postsynaptic potential
GO:1902897 P regulation of postsynaptic density protein 95 clustering
GO:1902952 P positive regulation of dendritic spine maintenance
821 O_BomoOtmSK1073_5prime_partial:A_BomoOtmSK_comp4549_c0_seq1
220bp
 UDP-N-acetylglucosamine_transferase_subunit_ALG14_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031965 C nuclear membrane
822 O_BomoOtmSK10740_5prime_partial:A_BomoOtmSK_comp13628_c0_seq1
117bp
823 O_BomoOtmSK10741_5prime_partial:A_BomoOtmSK_comp13628_c0_seq2
336bp
 protein_kinase_C-binding_protein_1-like_isoform_X2_[Helicoverpa_armigera]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001106 F transcription corepressor activity
GO:0003682 F chromatin binding
GO:0003712 F transcription coregulator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0042393 F histone binding
GO:0043197 C dendritic spine
GO:0043198 C dendritic shaft
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0051491 P positive regulation of filopodium assembly
GO:0060999 P positive regulation of dendritic spine development
GO:0070491 F DNA-binding transcription factor binding
GO:0098815 P modulation of excitatory postsynaptic potential
GO:1902897 P regulation of postsynaptic density protein 95 clustering
GO:1902952 P positive regulation of dendritic spine maintenance
824 O_BomoOtmSK10742_complete:A_BomoOtmSK_comp13628_c0_seq2
101bp
825 O_BomoOtmSK10743_internal:A_BomoOtmSK_comp13629_c1_seq1
216bp
 RNA-binding_protein_48_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005654 C nucleoplasm
GO:0008150 P biological_process
826 O_BomoOtmSK10744_5prime_partial:A_BomoOtmSK_comp13630_c0_seq1
124bp
827 O_BomoOtmSK10745_5prime_partial:A_BomoOtmSK_comp13630_c0_seq2
106bp
828 O_BomoOtmSK10746_3prime_partial:A_BomoOtmSK_comp13631_c0_seq1
442bp
 uncharacterized_protein_LOC101736849_isoform_X1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006914 P autophagy
GO:0007040 P lysosome organization
GO:0010507 P negative regulation of autophagy
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:2000773 P negative regulation of cellular senescence
829 O_BomoOtmSK10747_5prime_partial:A_BomoOtmSK_comp13631_c0_seq1
180bp
 hypothetical_protein_N336_00102,_partial_[Phalacrocorax_carbo]
830 O_BomoOtmSK10748_3prime_partial:A_BomoOtmSK_comp13631_c0_seq2
701bp
 uncharacterized_protein_LOC101736849_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006914 P autophagy
GO:0007040 P lysosome organization
GO:0010507 P negative regulation of autophagy
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:2000773 P negative regulation of cellular senescence
831 O_BomoOtmSK10749_5prime_partial:A_BomoOtmSK_comp13631_c0_seq2
180bp
 hypothetical_protein_N336_00102,_partial_[Phalacrocorax_carbo]
832 O_BomoOtmSK1074_3prime_partial:A_BomoOtmSK_comp4551_c0_seq1
243bp
 uncharacterized_protein_LOC101744754_[Bombyx_mori]
GO:0016491 F oxidoreductase activity
GO:0016647 F oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor
GO:0050131 F N-methyl-L-amino-acid oxidase activity
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
833 O_BomoOtmSK10750_5prime_partial:A_BomoOtmSK_comp13631_c1_seq1
212bp
834 O_BomoOtmSK10751_3prime_partial:A_BomoOtmSK_comp13631_c1_seq1
175bp
835 O_BomoOtmSK10752_5prime_partial:A_BomoOtmSK_comp13631_c1_seq1
156bp
 uncharacterized_protein_LOC101736849_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0046872 F metal ion binding
836 O_BomoOtmSK10753_complete:A_BomoOtmSK_comp13632_c0_seq1
357bp
 protein_lunapark-B_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0046872 F metal ion binding
GO:0071782 C endoplasmic reticulum tubular network
GO:0071786 P endoplasmic reticulum tubular network organization
837 O_BomoOtmSK10754_complete:A_BomoOtmSK_comp13632_c0_seq1
146bp
838 O_BomoOtmSK10755_complete:A_BomoOtmSK_comp13632_c0_seq2
183bp
 protein_lunapark-B_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0046872 F metal ion binding
GO:0071782 C endoplasmic reticulum tubular network
GO:0071786 P endoplasmic reticulum tubular network organization
839 O_BomoOtmSK10756_complete:A_BomoOtmSK_comp13632_c0_seq3
183bp
 protein_lunapark-B_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0046872 F metal ion binding
GO:0071782 C endoplasmic reticulum tubular network
GO:0071786 P endoplasmic reticulum tubular network organization
840 O_BomoOtmSK10757_complete:A_BomoOtmSK_comp13632_c0_seq4
357bp
 protein_lunapark-B_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0046872 F metal ion binding
GO:0071782 C endoplasmic reticulum tubular network
GO:0071786 P endoplasmic reticulum tubular network organization
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