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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
781 O_BomoOtmSK10703_3prime_partial:A_BomoOtmSK_comp13610_c0_seq3
128bp
 PREDICTED:_cysteine-rich_DPF_motif_domain-containing_protein_1-like_isoform_X2_[Papilio_xuthus]
782 O_BomoOtmSK10704_complete:A_BomoOtmSK_comp13611_c0_seq1
546bp
 uncharacterized_protein_LOC101746184_[Bombyx_mori]
783 O_BomoOtmSK10705_complete:A_BomoOtmSK_comp13611_c0_seq1
210bp
784 O_BomoOtmSK10706_complete:A_BomoOtmSK_comp13611_c0_seq1
105bp
785 O_BomoOtmSK10707_complete:A_BomoOtmSK_comp13612_c0_seq1
354bp
 GPN-loop_GTPase_1-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
786 O_BomoOtmSK10708_complete:A_BomoOtmSK_comp13612_c0_seq2
374bp
 GPN-loop_GTPase_1-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
787 O_BomoOtmSK10709_complete:A_BomoOtmSK_comp13612_c0_seq2
126bp
788 O_BomoOtmSK1070_5prime_partial:A_BomoOtmSK_comp4530_c0_seq1
161bp
 P_protein_isoform_X5_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005302 F L-tyrosine transmembrane transporter activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005789 C endoplasmic reticulum membrane
GO:0006726 P eye pigment biosynthetic process
GO:0006810 P transport
GO:0007286 P spermatid development
GO:0008283 P cell population proliferation
GO:0010008 C endosome membrane
GO:0015828 P tyrosine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030318 P melanocyte differentiation
GO:0033162 C melanosome membrane
GO:0042438 P melanin biosynthetic process
GO:0043473 P pigmentation
GO:0048066 P developmental pigmentation
GO:0055085 P transmembrane transport
789 O_BomoOtmSK10710_5prime_partial:A_BomoOtmSK_comp13613_c0_seq1
126bp
 cytoplasmic_FMR1-interacting_protein_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0008360 P regulation of cell shape
GO:0022416 P chaeta development
GO:0030031 P cell projection assembly
GO:0030154 P cell differentiation
GO:0030866 P cortical actin cytoskeleton organization
GO:0031209 C SCAR complex
GO:0050807 P regulation of synapse organization
790 O_BomoOtmSK10711_complete:A_BomoOtmSK_comp13614_c0_seq1
430bp
 spondin-2_[Bombyx_mori]
GO:0002376 P immune system process
GO:0005102 F signaling receptor binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0007155 P cell adhesion
GO:0031012 C extracellular matrix
GO:0045087 P innate immune response
GO:0046872 F metal ion binding
791 O_BomoOtmSK10712_complete:A_BomoOtmSK_comp13614_c0_seq1
135bp
792 O_BomoOtmSK10713_complete:A_BomoOtmSK_comp13614_c0_seq2
430bp
 spondin-2_[Bombyx_mori]
GO:0002376 P immune system process
GO:0005102 F signaling receptor binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0007155 P cell adhesion
GO:0031012 C extracellular matrix
GO:0045087 P innate immune response
GO:0046872 F metal ion binding
793 O_BomoOtmSK10714_complete:A_BomoOtmSK_comp13614_c0_seq2
135bp
794 O_BomoOtmSK10715_5prime_partial:A_BomoOtmSK_comp13615_c0_seq1
524bp
 spindle_assembly_abnormal_protein_6_homolog_isoform_X1_[Bombyx_mori]
GO:0000280 P nuclear division
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0007052 P mitotic spindle organization
GO:0007099 P centriole replication
GO:0007283 P spermatogenesis
GO:0040016 P embryonic cleavage
GO:0051298 P centrosome duplication
GO:0098536 C deuterosome
795 O_BomoOtmSK10716_complete:A_BomoOtmSK_comp13616_c0_seq1
740bp
 uncharacterized_protein_LOC101736534_isoform_X2_[Bombyx_mori]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0001750 C photoreceptor outer segment
GO:0001917 C photoreceptor inner segment
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005902 C microvillus
GO:0005903 C brush border
GO:0007605 P sensory perception of sound
GO:0030046 P parallel actin filament bundle assembly
GO:0030154 P cell differentiation
GO:0030507 F spectrin binding
GO:0032029 F myosin tail binding
GO:0032420 C stereocilium
GO:0032532 P regulation of microvillus length
GO:0042472 P inner ear morphogenesis
GO:0042491 P inner ear auditory receptor cell differentiation
GO:0042995 C cell projection
GO:0043623 P protein-containing complex assembly
GO:0045177 C apical part of cell
GO:0045202 C synapse
GO:0045494 P photoreceptor cell maintenance
GO:0050885 P neuromuscular process controlling balance
GO:0050953 P sensory perception of light stimulus
GO:0050957 P equilibrioception
GO:0051015 F actin filament binding
GO:0051017 P actin filament bundle assembly
GO:0060122 P inner ear receptor cell stereocilium organization
GO:1904106 P protein localization to microvillus
GO:1904970 P brush border assembly
796 O_BomoOtmSK10717_complete:A_BomoOtmSK_comp13616_c0_seq1
138bp
797 O_BomoOtmSK10718_complete:A_BomoOtmSK_comp13616_c0_seq2
231bp
 uncharacterized_protein_LOC101736534_isoform_X3_[Bombyx_mori]
798 O_BomoOtmSK10719_complete:A_BomoOtmSK_comp13616_c0_seq3
228bp
 uncharacterized_protein_LOC101736534_isoform_X2_[Bombyx_mori]
799 O_BomoOtmSK1071_complete:A_BomoOtmSK_comp4535_c0_seq1
1372bp
 protein_Daple_[Bombyx_mori]
GO:0001932 P regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016055 P Wnt signaling pathway
GO:0030165 F PDZ domain binding
GO:0031098 P stress-activated protein kinase signaling cascade
GO:0031648 P protein destabilization
GO:0043621 F protein self-association
GO:0051260 P protein homooligomerization
800 O_BomoOtmSK10720_complete:A_BomoOtmSK_comp13616_c0_seq4
743bp
 uncharacterized_protein_LOC101736534_isoform_X1_[Bombyx_mori]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0001750 C photoreceptor outer segment
GO:0001917 C photoreceptor inner segment
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005902 C microvillus
GO:0005903 C brush border
GO:0007605 P sensory perception of sound
GO:0030046 P parallel actin filament bundle assembly
GO:0030154 P cell differentiation
GO:0030507 F spectrin binding
GO:0032029 F myosin tail binding
GO:0032420 C stereocilium
GO:0032532 P regulation of microvillus length
GO:0042472 P inner ear morphogenesis
GO:0042491 P inner ear auditory receptor cell differentiation
GO:0042995 C cell projection
GO:0043623 P protein-containing complex assembly
GO:0045177 C apical part of cell
GO:0045202 C synapse
GO:0045494 P photoreceptor cell maintenance
GO:0050885 P neuromuscular process controlling balance
GO:0050953 P sensory perception of light stimulus
GO:0050957 P equilibrioception
GO:0051015 F actin filament binding
GO:0051017 P actin filament bundle assembly
GO:0060122 P inner ear receptor cell stereocilium organization
GO:1904106 P protein localization to microvillus
GO:1904970 P brush border assembly
801 O_BomoOtmSK10721_complete:A_BomoOtmSK_comp13616_c0_seq4
138bp
802 O_BomoOtmSK10722_internal:A_BomoOtmSK_comp13617_c0_seq1
238bp
 PREDICTED:_uncharacterized_protein_LOC106138993_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005829 C cytosol
GO:0008270 F zinc ion binding
GO:0008494 F translation activator activity
GO:0046872 F metal ion binding
GO:2000767 P positive regulation of cytoplasmic translation
803 O_BomoOtmSK10723_3prime_partial:A_BomoOtmSK_comp13617_c1_seq1
99bp
 PREDICTED:_uncharacterized_protein_LOC106138993_[Amyelois_transitella]
804 O_BomoOtmSK10724_internal:A_BomoOtmSK_comp13618_c0_seq1
190bp
 transmembrane_protein_115_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005794 C Golgi apparatus
GO:0006486 P protein glycosylation
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0008285 P negative regulation of cell population proliferation
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017119 C Golgi transport complex
GO:0032580 C Golgi cisterna membrane
GO:0042802 F identical protein binding
805 O_BomoOtmSK10725_complete:A_BomoOtmSK_comp13618_c0_seq1
101bp
806 O_BomoOtmSK10726_5prime_partial:A_BomoOtmSK_comp13618_c0_seq2
375bp
 transmembrane_protein_115_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005794 C Golgi apparatus
GO:0006486 P protein glycosylation
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017119 C Golgi transport complex
GO:0032580 C Golgi cisterna membrane
GO:0042802 F identical protein binding
807 O_BomoOtmSK10727_complete:A_BomoOtmSK_comp13618_c0_seq2
101bp
808 O_BomoOtmSK10728_complete:A_BomoOtmSK_comp13619_c0_seq1
1277bp
 PREDICTED:_mucin-2-like_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
809 O_BomoOtmSK10729_internal:A_BomoOtmSK_comp13621_c0_seq1
582bp
 centrosomal_protein_of_135_kDa_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0007099 P centriole replication
GO:0010457 P centriole-centriole cohesion
810 O_BomoOtmSK1072_complete:A_BomoOtmSK_comp4535_c0_seq1
157bp
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