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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3571 O_BomoOtmSK13214_3prime_partial:A_BomoOtmSK_comp14589_c0_seq4
684bp
 dystroglycan_isoform_X4_[Bombyx_mori]
GO:0002011 P morphogenesis of an epithelial sheet
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0006509 P membrane protein ectodomain proteolysis
GO:0006607 P NLS-bearing protein import into nucleus
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0008307 F structural constituent of muscle
GO:0009279 C cell outer membrane
GO:0010470 P regulation of gastrulation
GO:0010717 P regulation of epithelial to mesenchymal transition
GO:0014044 P Schwann cell development
GO:0015631 F tubulin binding
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016011 C dystroglycan complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017166 F vinculin binding
GO:0019048 P modulation by virus of host process
GO:0021682 P nerve maturation
GO:0022011 P myelination in peripheral nervous system
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0030336 P negative regulation of cell migration
GO:0033268 C node of Ranvier
GO:0034453 P microtubule anchoring
GO:0035556 P intracellular signal transduction
GO:0042169 F SH2 domain binding
GO:0042383 C sarcolemma
GO:0043237 F laminin-1 binding
GO:0043409 P negative regulation of MAPK cascade
GO:0045121 C membrane raft
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0051393 F alpha-actinin binding
GO:0051898 P negative regulation of protein kinase B signaling
GO:0060441 P epithelial tube branching involved in lung morphogenesis
GO:0060445 P branching involved in salivary gland morphogenesis
GO:0070062 C extracellular exosome
GO:0070938 C contractile ring
GO:0071679 P commissural neuron axon guidance
GO:0071711 P basement membrane organization
GO:1904261 P positive regulation of basement membrane assembly involved in embryonic body morphogenesis
3572 O_BomoOtmSK13215_complete:A_BomoOtmSK_comp14589_c0_seq4
209bp
3573 O_BomoOtmSK13216_5prime_partial:A_BomoOtmSK_comp14589_c0_seq4
134bp
3574 O_BomoOtmSK13217_5prime_partial:A_BomoOtmSK_comp14589_c0_seq4
123bp
3575 O_BomoOtmSK13218_complete:A_BomoOtmSK_comp14589_c0_seq4
117bp
3576 O_BomoOtmSK13219_3prime_partial:A_BomoOtmSK_comp14589_c0_seq5
731bp
 dystroglycan_isoform_X3_[Bombyx_mori]
GO:0002011 P morphogenesis of an epithelial sheet
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0006509 P membrane protein ectodomain proteolysis
GO:0006607 P NLS-bearing protein import into nucleus
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0008307 F structural constituent of muscle
GO:0009279 C cell outer membrane
GO:0010470 P regulation of gastrulation
GO:0010717 P regulation of epithelial to mesenchymal transition
GO:0014044 P Schwann cell development
GO:0015631 F tubulin binding
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016011 C dystroglycan complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017166 F vinculin binding
GO:0019048 P modulation by virus of host process
GO:0021682 P nerve maturation
GO:0022011 P myelination in peripheral nervous system
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0030336 P negative regulation of cell migration
GO:0033268 C node of Ranvier
GO:0034453 P microtubule anchoring
GO:0035556 P intracellular signal transduction
GO:0042169 F SH2 domain binding
GO:0042383 C sarcolemma
GO:0043237 F laminin-1 binding
GO:0043409 P negative regulation of MAPK cascade
GO:0045121 C membrane raft
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0051393 F alpha-actinin binding
GO:0051898 P negative regulation of protein kinase B signaling
GO:0060441 P epithelial tube branching involved in lung morphogenesis
GO:0060445 P branching involved in salivary gland morphogenesis
GO:0070062 C extracellular exosome
GO:0070938 C contractile ring
GO:0071679 P commissural neuron axon guidance
GO:0071711 P basement membrane organization
GO:1904261 P positive regulation of basement membrane assembly involved in embryonic body morphogenesis
3577 O_BomoOtmSK1321_complete:A_BomoOtmSK_comp4865_c0_seq1
503bp
 glucosidase_precursor_[Bombyx_mori]
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0019137 F thioglucosidase activity
GO:0046872 F metal ion binding
3578 O_BomoOtmSK13220_complete:A_BomoOtmSK_comp14589_c0_seq5
256bp
3579 O_BomoOtmSK13221_5prime_partial:A_BomoOtmSK_comp14589_c0_seq5
134bp
3580 O_BomoOtmSK13222_5prime_partial:A_BomoOtmSK_comp14589_c0_seq5
123bp
3581 O_BomoOtmSK13223_complete:A_BomoOtmSK_comp14589_c0_seq5
117bp
3582 O_BomoOtmSK13224_3prime_partial:A_BomoOtmSK_comp14589_c0_seq6
577bp
 dystroglycan_isoform_X3_[Helicoverpa_armigera]
GO:0002011 P morphogenesis of an epithelial sheet
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0006509 P membrane protein ectodomain proteolysis
GO:0006607 P NLS-bearing protein import into nucleus
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0008307 F structural constituent of muscle
GO:0009279 C cell outer membrane
GO:0010470 P regulation of gastrulation
GO:0010717 P regulation of epithelial to mesenchymal transition
GO:0014044 P Schwann cell development
GO:0015631 F tubulin binding
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016011 C dystroglycan complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017166 F vinculin binding
GO:0019048 P modulation by virus of host process
GO:0021682 P nerve maturation
GO:0022011 P myelination in peripheral nervous system
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0030336 P negative regulation of cell migration
GO:0033268 C node of Ranvier
GO:0034453 P microtubule anchoring
GO:0042169 F SH2 domain binding
GO:0042383 C sarcolemma
GO:0043409 P negative regulation of MAPK cascade
GO:0045121 C membrane raft
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0051393 F alpha-actinin binding
GO:0051898 P negative regulation of protein kinase B signaling
GO:0060441 P epithelial tube branching involved in lung morphogenesis
GO:0060445 P branching involved in salivary gland morphogenesis
GO:0070062 C extracellular exosome
GO:0070938 C contractile ring
GO:0071679 P commissural neuron axon guidance
GO:0071711 P basement membrane organization
GO:1904261 P positive regulation of basement membrane assembly involved in embryonic body morphogenesis
3583 O_BomoOtmSK13225_5prime_partial:A_BomoOtmSK_comp14589_c0_seq6
134bp
3584 O_BomoOtmSK13226_5prime_partial:A_BomoOtmSK_comp14589_c0_seq6
123bp
3585 O_BomoOtmSK13227_complete:A_BomoOtmSK_comp14589_c0_seq6
102bp
3586 O_BomoOtmSK13228_3prime_partial:A_BomoOtmSK_comp14589_c0_seq7
684bp
 dystroglycan_isoform_X4_[Bombyx_mori]
GO:0002011 P morphogenesis of an epithelial sheet
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0006509 P membrane protein ectodomain proteolysis
GO:0006607 P NLS-bearing protein import into nucleus
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0008307 F structural constituent of muscle
GO:0009279 C cell outer membrane
GO:0010470 P regulation of gastrulation
GO:0010717 P regulation of epithelial to mesenchymal transition
GO:0014044 P Schwann cell development
GO:0015631 F tubulin binding
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016011 C dystroglycan complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017166 F vinculin binding
GO:0019048 P modulation by virus of host process
GO:0021682 P nerve maturation
GO:0022011 P myelination in peripheral nervous system
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0030336 P negative regulation of cell migration
GO:0033268 C node of Ranvier
GO:0034453 P microtubule anchoring
GO:0035556 P intracellular signal transduction
GO:0042169 F SH2 domain binding
GO:0042383 C sarcolemma
GO:0043237 F laminin-1 binding
GO:0043409 P negative regulation of MAPK cascade
GO:0045121 C membrane raft
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0051393 F alpha-actinin binding
GO:0051898 P negative regulation of protein kinase B signaling
GO:0060441 P epithelial tube branching involved in lung morphogenesis
GO:0060445 P branching involved in salivary gland morphogenesis
GO:0070062 C extracellular exosome
GO:0070938 C contractile ring
GO:0071679 P commissural neuron axon guidance
GO:0071711 P basement membrane organization
GO:1904261 P positive regulation of basement membrane assembly involved in embryonic body morphogenesis
3587 O_BomoOtmSK13229_complete:A_BomoOtmSK_comp14589_c0_seq7
209bp
3588 O_BomoOtmSK1322_complete:A_BomoOtmSK_comp4868_c0_seq1
1006bp
 serine/threonine-protein_kinase_Tao_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019901 F protein kinase binding
GO:0023014 P signal transduction
GO:0030295 F protein kinase activator activity
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0032147 P activation of protein kinase activity
GO:0032874 P positive regulation of stress-activated MAPK cascade
GO:0046330 P positive regulation of JNK cascade
GO:0051493 P regulation of cytoskeleton organization
GO:0097194 P execution phase of apoptosis
3589 O_BomoOtmSK13230_5prime_partial:A_BomoOtmSK_comp14589_c0_seq7
134bp
3590 O_BomoOtmSK13231_5prime_partial:A_BomoOtmSK_comp14589_c0_seq7
123bp
3591 O_BomoOtmSK13232_complete:A_BomoOtmSK_comp14589_c0_seq7
117bp
3592 O_BomoOtmSK13233_3prime_partial:A_BomoOtmSK_comp14589_c0_seq8
624bp
 dystroglycan_isoform_X5_[Bombyx_mori]
GO:0002011 P morphogenesis of an epithelial sheet
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0006509 P membrane protein ectodomain proteolysis
GO:0006607 P NLS-bearing protein import into nucleus
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0008307 F structural constituent of muscle
GO:0009279 C cell outer membrane
GO:0010470 P regulation of gastrulation
GO:0010717 P regulation of epithelial to mesenchymal transition
GO:0014044 P Schwann cell development
GO:0015631 F tubulin binding
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016011 C dystroglycan complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017166 F vinculin binding
GO:0019048 P modulation by virus of host process
GO:0021682 P nerve maturation
GO:0022011 P myelination in peripheral nervous system
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0030336 P negative regulation of cell migration
GO:0033268 C node of Ranvier
GO:0034453 P microtubule anchoring
GO:0042169 F SH2 domain binding
GO:0042383 C sarcolemma
GO:0043409 P negative regulation of MAPK cascade
GO:0045121 C membrane raft
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0051393 F alpha-actinin binding
GO:0051898 P negative regulation of protein kinase B signaling
GO:0060441 P epithelial tube branching involved in lung morphogenesis
GO:0060445 P branching involved in salivary gland morphogenesis
GO:0070062 C extracellular exosome
GO:0070938 C contractile ring
GO:0071679 P commissural neuron axon guidance
GO:0071711 P basement membrane organization
GO:1904261 P positive regulation of basement membrane assembly involved in embryonic body morphogenesis
3593 O_BomoOtmSK13234_complete:A_BomoOtmSK_comp14589_c0_seq8
149bp
3594 O_BomoOtmSK13235_5prime_partial:A_BomoOtmSK_comp14589_c0_seq8
134bp
3595 O_BomoOtmSK13236_5prime_partial:A_BomoOtmSK_comp14589_c0_seq8
123bp
3596 O_BomoOtmSK13237_complete:A_BomoOtmSK_comp14591_c0_seq3
267bp
 transcription_termination_factor_3,_mitochondrial_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0005739 C mitochondrion
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
3597 O_BomoOtmSK13238_complete:A_BomoOtmSK_comp14591_c0_seq4
385bp
 endoplasmic_reticulum-Golgi_intermediate_compartment_protein_3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0033116 C endoplasmic reticulum-Golgi intermediate compartment membrane
3598 O_BomoOtmSK13239_complete:A_BomoOtmSK_comp14591_c0_seq4
114bp
 transcription_termination_factor_3,_mitochondrial_[Bombyx_mori]
GO:0003690 F double-stranded DNA binding
GO:0005739 C mitochondrion
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
3599 O_BomoOtmSK1323_complete:A_BomoOtmSK_comp4868_c0_seq2
991bp
 serine/threonine-protein_kinase_Tao_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019901 F protein kinase binding
GO:0023014 P signal transduction
GO:0030295 F protein kinase activator activity
GO:0031572 P mitotic G2 DNA damage checkpoint signaling
GO:0032147 P activation of protein kinase activity
GO:0032874 P positive regulation of stress-activated MAPK cascade
GO:0046330 P positive regulation of JNK cascade
GO:0051493 P regulation of cytoskeleton organization
GO:0097194 P execution phase of apoptosis
3600 O_BomoOtmSK13240_complete:A_BomoOtmSK_comp14591_c0_seq5
267bp
 transcription_termination_factor_3,_mitochondrial_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0005739 C mitochondrion
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
previous next from show/35878

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