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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3541 O_BomoOtmSK13188_5prime_partial:A_BomoOtmSK_comp14584_c1_seq5
779bp
 importin-7_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0007165 P signal transduction
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0042393 F histone binding
GO:0045087 P innate immune response
3542 O_BomoOtmSK13189_complete:A_BomoOtmSK_comp14584_c1_seq5
103bp
3543 O_BomoOtmSK1318_internal:A_BomoOtmSK_comp4861_c0_seq2
106bp
 neural_Wiskott-Aldrich_syndrome_protein_[Bombyx_mori]
GO:0002625 P regulation of T cell antigen processing and presentation
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005911 C cell-cell junction
GO:0006461 P protein-containing complex assembly
GO:0006952 P defense response
GO:0006955 P immune response
GO:0007015 P actin filament organization
GO:0007596 P blood coagulation
GO:0008154 P actin polymerization or depolymerization
GO:0008544 P epidermis development
GO:0012506 C vesicle membrane
GO:0015629 C actin cytoskeleton
GO:0016197 P endosomal transport
GO:0017124 F SH3 domain binding
GO:0019901 F protein kinase binding
GO:0030041 P actin filament polymerization
GO:0030048 P actin filament-based movement
GO:0030695 F GTPase regulator activity
GO:0038096 P Fc-gamma receptor signaling pathway involved in phagocytosis
GO:0042110 P T cell activation
GO:0042802 F identical protein binding
GO:0043274 F phospholipase binding
GO:0050790 P regulation of catalytic activity
GO:0050852 P T cell receptor signaling pathway
GO:0070062 C extracellular exosome
GO:2000146 P negative regulation of cell motility
GO:2000601 P positive regulation of Arp2/3 complex-mediated actin nucleation
3544 O_BomoOtmSK13190_3prime_partial:A_BomoOtmSK_comp14585_c0_seq1
471bp
 uncharacterized_protein_LOC110370848_[Helicoverpa_armigera]
3545 O_BomoOtmSK13191_5prime_partial:A_BomoOtmSK_comp14585_c0_seq1
155bp
3546 O_BomoOtmSK13192_complete:A_BomoOtmSK_comp14585_c0_seq1
143bp
3547 O_BomoOtmSK13193_internal:A_BomoOtmSK_comp14585_c0_seq2
324bp
 uncharacterized_protein_LOC110370848_[Helicoverpa_armigera]
3548 O_BomoOtmSK13194_5prime_partial:A_BomoOtmSK_comp14585_c0_seq2
155bp
3549 O_BomoOtmSK13195_3prime_partial:A_BomoOtmSK_comp14586_c0_seq1
738bp
 ubiquitin_carboxyl-terminal_hydrolase_10-A_[Bombyx_mori]
GO:0002039 F p53 binding
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0006281 P DNA repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006914 P autophagy
GO:0006974 P cellular response to DNA damage stimulus
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010506 P regulation of autophagy
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030330 P DNA damage response, signal transduction by p53 class mediator
GO:0036459 F thiol-dependent deubiquitinase
GO:0044325 F transmembrane transporter binding
3550 O_BomoOtmSK13196_complete:A_BomoOtmSK_comp14586_c0_seq1
125bp
3551 O_BomoOtmSK13197_3prime_partial:A_BomoOtmSK_comp14586_c0_seq2
813bp
 PREDICTED:_adhesive_plaque_matrix_protein_isoform_X2_[Papilio_xuthus]
GO:0002039 F p53 binding
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005769 C early endosome
GO:0006281 P DNA repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006914 P autophagy
GO:0006974 P cellular response to DNA damage stimulus
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010506 P regulation of autophagy
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030330 P DNA damage response, signal transduction by p53 class mediator
GO:0036459 F thiol-dependent deubiquitinase
GO:0044325 F transmembrane transporter binding
3552 O_BomoOtmSK13198_complete:A_BomoOtmSK_comp14586_c0_seq2
125bp
3553 O_BomoOtmSK13199_internal:A_BomoOtmSK_comp14588_c1_seq1
119bp
 uncharacterized_protein_LOC110386820_[Bombyx_mori]
3554 O_BomoOtmSK1319_complete:A_BomoOtmSK_comp4864_c0_seq1
885bp
 uncharacterized_protein_LOC101740740_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005923 C bicellular tight junction
GO:0007155 P cell adhesion
GO:0008022 F protein C-terminus binding
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016324 C apical plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0031410 C cytoplasmic vesicle
GO:0042552 P myelination
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043220 C Schmidt-Lanterman incisure
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
3555 O_BomoOtmSK131_internal:A_BomoOtmSK_comp504_c1_seq1
136bp
 LOW_QUALITY_PROTEIN:_dynein_heavy_chain_8,_axonemal_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001539 P cilium or flagellum-dependent cell motility
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005858 C axonemal dynein complex
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007018 P microtubule-based movement
GO:0008152 P metabolic process
GO:0016887 F ATP hydrolysis activity
GO:0030286 C dynein complex
GO:0042995 C cell projection
3556 O_BomoOtmSK13200_5prime_partial:A_BomoOtmSK_comp14588_c1_seq1
117bp
3557 O_BomoOtmSK13201_3prime_partial:A_BomoOtmSK_comp14589_c0_seq1
577bp
 dystroglycan_isoform_X3_[Helicoverpa_armigera]
GO:0002011 P morphogenesis of an epithelial sheet
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0006509 P membrane protein ectodomain proteolysis
GO:0006607 P NLS-bearing protein import into nucleus
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0008307 F structural constituent of muscle
GO:0009279 C cell outer membrane
GO:0010470 P regulation of gastrulation
GO:0010717 P regulation of epithelial to mesenchymal transition
GO:0014044 P Schwann cell development
GO:0015631 F tubulin binding
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016011 C dystroglycan complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017166 F vinculin binding
GO:0019048 P modulation by virus of host process
GO:0021682 P nerve maturation
GO:0022011 P myelination in peripheral nervous system
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0030336 P negative regulation of cell migration
GO:0033268 C node of Ranvier
GO:0034453 P microtubule anchoring
GO:0042169 F SH2 domain binding
GO:0042383 C sarcolemma
GO:0043409 P negative regulation of MAPK cascade
GO:0045121 C membrane raft
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0051393 F alpha-actinin binding
GO:0051898 P negative regulation of protein kinase B signaling
GO:0060441 P epithelial tube branching involved in lung morphogenesis
GO:0060445 P branching involved in salivary gland morphogenesis
GO:0070062 C extracellular exosome
GO:0070938 C contractile ring
GO:0071679 P commissural neuron axon guidance
GO:0071711 P basement membrane organization
GO:1904261 P positive regulation of basement membrane assembly involved in embryonic body morphogenesis
3558 O_BomoOtmSK13202_5prime_partial:A_BomoOtmSK_comp14589_c0_seq1
134bp
3559 O_BomoOtmSK13203_5prime_partial:A_BomoOtmSK_comp14589_c0_seq1
123bp
3560 O_BomoOtmSK13204_complete:A_BomoOtmSK_comp14589_c0_seq1
102bp
3561 O_BomoOtmSK13205_3prime_partial:A_BomoOtmSK_comp14589_c0_seq2
731bp
 dystroglycan_isoform_X3_[Bombyx_mori]
GO:0002011 P morphogenesis of an epithelial sheet
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0006509 P membrane protein ectodomain proteolysis
GO:0006607 P NLS-bearing protein import into nucleus
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0008307 F structural constituent of muscle
GO:0009279 C cell outer membrane
GO:0010470 P regulation of gastrulation
GO:0010717 P regulation of epithelial to mesenchymal transition
GO:0014044 P Schwann cell development
GO:0015631 F tubulin binding
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016011 C dystroglycan complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017166 F vinculin binding
GO:0019048 P modulation by virus of host process
GO:0021682 P nerve maturation
GO:0022011 P myelination in peripheral nervous system
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0030336 P negative regulation of cell migration
GO:0033268 C node of Ranvier
GO:0034453 P microtubule anchoring
GO:0035556 P intracellular signal transduction
GO:0042169 F SH2 domain binding
GO:0042383 C sarcolemma
GO:0043237 F laminin-1 binding
GO:0043409 P negative regulation of MAPK cascade
GO:0045121 C membrane raft
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0051393 F alpha-actinin binding
GO:0051898 P negative regulation of protein kinase B signaling
GO:0060441 P epithelial tube branching involved in lung morphogenesis
GO:0060445 P branching involved in salivary gland morphogenesis
GO:0070062 C extracellular exosome
GO:0070938 C contractile ring
GO:0071679 P commissural neuron axon guidance
GO:0071711 P basement membrane organization
GO:1904261 P positive regulation of basement membrane assembly involved in embryonic body morphogenesis
3562 O_BomoOtmSK13206_complete:A_BomoOtmSK_comp14589_c0_seq2
256bp
3563 O_BomoOtmSK13207_5prime_partial:A_BomoOtmSK_comp14589_c0_seq2
134bp
3564 O_BomoOtmSK13208_5prime_partial:A_BomoOtmSK_comp14589_c0_seq2
123bp
3565 O_BomoOtmSK13209_complete:A_BomoOtmSK_comp14589_c0_seq2
117bp
3566 O_BomoOtmSK1320_complete:A_BomoOtmSK_comp4864_c0_seq2
885bp
 uncharacterized_protein_LOC101740740_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005923 C bicellular tight junction
GO:0007155 P cell adhesion
GO:0008022 F protein C-terminus binding
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016324 C apical plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0031410 C cytoplasmic vesicle
GO:0042552 P myelination
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043220 C Schmidt-Lanterman incisure
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
3567 O_BomoOtmSK13210_3prime_partial:A_BomoOtmSK_comp14589_c0_seq3
624bp
 dystroglycan_isoform_X5_[Bombyx_mori]
GO:0002011 P morphogenesis of an epithelial sheet
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0006509 P membrane protein ectodomain proteolysis
GO:0006607 P NLS-bearing protein import into nucleus
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0008307 F structural constituent of muscle
GO:0009279 C cell outer membrane
GO:0010470 P regulation of gastrulation
GO:0010717 P regulation of epithelial to mesenchymal transition
GO:0014044 P Schwann cell development
GO:0015631 F tubulin binding
GO:0016010 C dystrophin-associated glycoprotein complex
GO:0016011 C dystroglycan complex
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017166 F vinculin binding
GO:0019048 P modulation by virus of host process
GO:0021682 P nerve maturation
GO:0022011 P myelination in peripheral nervous system
GO:0030027 C lamellipodium
GO:0030054 C cell junction
GO:0030175 C filopodium
GO:0030336 P negative regulation of cell migration
GO:0033268 C node of Ranvier
GO:0034453 P microtubule anchoring
GO:0042169 F SH2 domain binding
GO:0042383 C sarcolemma
GO:0043409 P negative regulation of MAPK cascade
GO:0045121 C membrane raft
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0051393 F alpha-actinin binding
GO:0051898 P negative regulation of protein kinase B signaling
GO:0060441 P epithelial tube branching involved in lung morphogenesis
GO:0060445 P branching involved in salivary gland morphogenesis
GO:0070062 C extracellular exosome
GO:0070938 C contractile ring
GO:0071679 P commissural neuron axon guidance
GO:0071711 P basement membrane organization
GO:1904261 P positive regulation of basement membrane assembly involved in embryonic body morphogenesis
3568 O_BomoOtmSK13211_complete:A_BomoOtmSK_comp14589_c0_seq3
149bp
3569 O_BomoOtmSK13212_5prime_partial:A_BomoOtmSK_comp14589_c0_seq3
134bp
3570 O_BomoOtmSK13213_5prime_partial:A_BomoOtmSK_comp14589_c0_seq3
123bp
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