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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3391 O_BomoOtmSK13052_complete:A_BomoOtmSK_comp14545_c1_seq1
167bp
 uncharacterized_protein_LOC101737570_isoform_X2_[Bombyx_mori]
3392 O_BomoOtmSK13053_complete:A_BomoOtmSK_comp14545_c1_seq2
190bp
 uncharacterized_protein_LOC101737807_[Bombyx_mori]
3393 O_BomoOtmSK13054_5prime_partial:A_BomoOtmSK_comp14545_c1_seq3
136bp
 uncharacterized_protein_LOC101737570_isoform_X2_[Bombyx_mori]
3394 O_BomoOtmSK13055_5prime_partial:A_BomoOtmSK_comp14547_c0_seq1
638bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
3395 O_BomoOtmSK13056_complete:A_BomoOtmSK_comp14547_c0_seq1
164bp
 uncharacterized_protein_LOC105842894_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004533 F exoribonuclease H activity
GO:0005198 F structural molecule activity
GO:0005622 C intracellular anatomical structure
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0008289 F lipid binding
GO:0015074 P DNA integration
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019012 C virion component
GO:0019013 C viral nucleocapsid
GO:0019028 C viral capsid
GO:0019076 P viral release from host cell
GO:0020002 C host cell plasma membrane
GO:0030430 C host cell cytoplasm
GO:0033644 C host cell membrane
GO:0039526 P modulation by virus of host apoptotic process
GO:0039651 P induction by virus of host cysteine-type endopeptidase activity involved in apoptotic process
GO:0039657 P suppression by virus of host gene expression
GO:0042025 C host cell nucleus
GO:0044174 C host cell endosome
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0055036 C virion membrane
GO:0071897 P DNA biosynthetic process
GO:0072494 C host multivesicular body
GO:0075713 P establishment of integrated proviral latency
GO:0075732 P viral penetration into host nucleus
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
GO:0090503 P RNA phosphodiester bond hydrolysis, exonucleolytic
3396 O_BomoOtmSK13057_complete:A_BomoOtmSK_comp14547_c0_seq1
145bp
 RNA-directed_DNA_polymerase_from_mobile_element_jockey_[Papilio_machaon]
3397 O_BomoOtmSK13058_complete:A_BomoOtmSK_comp14549_c0_seq1
537bp
 histone-lysine_N-methyltransferase_2D_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0008150 P biological_process
3398 O_BomoOtmSK13059_complete:A_BomoOtmSK_comp14549_c0_seq2
455bp
 histone-lysine_N-methyltransferase_2D_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007399 P nervous system development
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
GO:0071564 C npBAF complex
3399 O_BomoOtmSK1305_complete:A_BomoOtmSK_comp4853_c0_seq2
197bp
3400 O_BomoOtmSK13060_complete:A_BomoOtmSK_comp14549_c0_seq3
355bp
 histone-lysine_N-methyltransferase_2D_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007399 P nervous system development
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
GO:0071564 C npBAF complex
3401 O_BomoOtmSK13061_complete:A_BomoOtmSK_comp14550_c0_seq1
1970bp
 chromodomain-helicase-DNA-binding_protein_Mi-2_homolog_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007283 P spermatogenesis
GO:0007517 P muscle organ development
GO:0008026 F helicase activity
GO:0008270 F zinc ion binding
GO:0016581 C NuRD complex
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0016887 F ATP hydrolysis activity
GO:0031491 F nucleosome binding
GO:0032508 P DNA duplex unwinding
GO:0035327 C euchromatin
GO:0042766 P nucleosome mobilization
GO:0043044 P chromatin remodeling
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0051276 P chromosome organization
GO:0051312 P chromosome decondensation
GO:0070615 F ATP-dependent chromatin remodeler activity
GO:0071923 P negative regulation of cohesin loading
3402 O_BomoOtmSK13062_3prime_partial:A_BomoOtmSK_comp14550_c0_seq1
165bp
3403 O_BomoOtmSK13063_complete:A_BomoOtmSK_comp14550_c0_seq1
158bp
3404 O_BomoOtmSK13064_complete:A_BomoOtmSK_comp14550_c0_seq1
145bp
3405 O_BomoOtmSK13065_complete:A_BomoOtmSK_comp14550_c0_seq1
131bp
3406 O_BomoOtmSK13066_complete:A_BomoOtmSK_comp14550_c0_seq1
111bp
3407 O_BomoOtmSK13067_complete:A_BomoOtmSK_comp14550_c0_seq2
1970bp
 chromodomain-helicase-DNA-binding_protein_Mi-2_homolog_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007283 P spermatogenesis
GO:0007517 P muscle organ development
GO:0008026 F helicase activity
GO:0008270 F zinc ion binding
GO:0016581 C NuRD complex
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0016887 F ATP hydrolysis activity
GO:0031491 F nucleosome binding
GO:0032508 P DNA duplex unwinding
GO:0035327 C euchromatin
GO:0042766 P nucleosome mobilization
GO:0043044 P chromatin remodeling
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0051276 P chromosome organization
GO:0051312 P chromosome decondensation
GO:0070615 F ATP-dependent chromatin remodeler activity
GO:0071923 P negative regulation of cohesin loading
3408 O_BomoOtmSK13068_3prime_partial:A_BomoOtmSK_comp14550_c0_seq2
165bp
3409 O_BomoOtmSK13069_complete:A_BomoOtmSK_comp14550_c0_seq2
158bp
3410 O_BomoOtmSK1306_complete:A_BomoOtmSK_comp4854_c0_seq1
303bp
 AN1-type_zinc_finger_protein_1-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
3411 O_BomoOtmSK13070_complete:A_BomoOtmSK_comp14550_c0_seq2
145bp
3412 O_BomoOtmSK13071_complete:A_BomoOtmSK_comp14550_c0_seq2
131bp
3413 O_BomoOtmSK13072_complete:A_BomoOtmSK_comp14550_c0_seq2
111bp
3414 O_BomoOtmSK13073_3prime_partial:A_BomoOtmSK_comp14551_c1_seq1
871bp
 uncharacterized_protein_LOC101746966_isoform_X2_[Bombyx_mori]
3415 O_BomoOtmSK13074_5prime_partial:A_BomoOtmSK_comp14551_c1_seq2
330bp
 uncharacterized_protein_LOC101746966_isoform_X1_[Bombyx_mori]
3416 O_BomoOtmSK13075_5prime_partial:A_BomoOtmSK_comp14551_c1_seq3
332bp
 uncharacterized_protein_LOC101746966_isoform_X2_[Bombyx_mori]
3417 O_BomoOtmSK13076_5prime_partial:A_BomoOtmSK_comp14552_c2_seq1
233bp
 zyxin_[Bombyx_mori]
3418 O_BomoOtmSK13077_complete:A_BomoOtmSK_comp14553_c0_seq1
107bp
 arginine_kinase,_partial_[Mamestra_configurata]
3419 O_BomoOtmSK13078_complete:A_BomoOtmSK_comp14554_c0_seq1
488bp
 cytochrome_P450_Cyp305B1_precursor_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
3420 O_BomoOtmSK13079_complete:A_BomoOtmSK_comp14554_c0_seq2
488bp
 cytochrome_P450_Cyp305B1_precursor_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
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