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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3421 O_BomoOtmSK1307_complete:A_BomoOtmSK_comp4854_c0_seq2
177bp
 AN1-type_zinc_finger_protein_1-like_[Bombyx_mori]
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
3422 O_BomoOtmSK13080_complete:A_BomoOtmSK_comp14555_c0_seq1
926bp
 neutral_alpha-glucosidase_AB-like_precursor_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0030246 F carbohydrate binding
GO:0033919 F glucan 1,3-alpha-glucosidase activity
GO:0042470 C melanosome
3423 O_BomoOtmSK13081_complete:A_BomoOtmSK_comp14555_c0_seq1
322bp
3424 O_BomoOtmSK13082_complete:A_BomoOtmSK_comp14555_c0_seq1
246bp
3425 O_BomoOtmSK13083_complete:A_BomoOtmSK_comp14555_c0_seq1
103bp
 hypothetical_protein_BG846_01345_[Streptomyces_fradiae_ATCC_10745_=_DSM_40063]
3426 O_BomoOtmSK13084_complete:A_BomoOtmSK_comp14555_c1_seq2
352bp
 gelsolin_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0006909 P phagocytosis
GO:0030041 P actin filament polymerization
GO:0045010 P actin nucleation
GO:0046872 F metal ion binding
GO:0051014 P actin filament severing
GO:0051016 P barbed-end actin filament capping
3427 O_BomoOtmSK13085_complete:A_BomoOtmSK_comp14555_c1_seq3
352bp
 gelsolin_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0006909 P phagocytosis
GO:0030041 P actin filament polymerization
GO:0045010 P actin nucleation
GO:0046872 F metal ion binding
GO:0051014 P actin filament severing
GO:0051016 P barbed-end actin filament capping
3428 O_BomoOtmSK13086_complete:A_BomoOtmSK_comp14557_c0_seq1
208bp
 lipopolysaccharide-induced_tumor_necrosis_factor-alpha_factor_homolog_isoform_X1_[Bombyx_mori]
GO:0001817 P regulation of cytokine production
GO:0004871 F obsolete signal transducer activity
GO:0005576 C extracellular region
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007165 P signal transduction
GO:0007568 P aging
GO:0016020 C membrane
GO:0032496 P response to lipopolysaccharide
GO:0042347 P negative regulation of NIK/NF-kappaB signaling
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 C intracellular membrane-bounded organelle
GO:0050699 F WW domain binding
GO:0071222 P cellular response to lipopolysaccharide
3429 O_BomoOtmSK13087_complete:A_BomoOtmSK_comp14557_c0_seq2
139bp
 lipopolysaccharide-induced_tumor_necrosis_factor-alpha_factor_homolog_isoform_X3_[Bombyx_mori]
GO:0001817 P regulation of cytokine production
GO:0004871 F obsolete signal transducer activity
GO:0005576 C extracellular region
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007165 P signal transduction
GO:0007568 P aging
GO:0016020 C membrane
GO:0032496 P response to lipopolysaccharide
GO:0042347 P negative regulation of NIK/NF-kappaB signaling
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 C intracellular membrane-bounded organelle
GO:0050699 F WW domain binding
GO:0071222 P cellular response to lipopolysaccharide
3430 O_BomoOtmSK13088_complete:A_BomoOtmSK_comp14557_c0_seq3
183bp
 lipopolysaccharide-induced_tumor_necrosis_factor-alpha_factor_homolog_isoform_X1_[Bombyx_mori]
GO:0001817 P regulation of cytokine production
GO:0004871 F obsolete signal transducer activity
GO:0005576 C extracellular region
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007165 P signal transduction
GO:0007568 P aging
GO:0016020 C membrane
GO:0032496 P response to lipopolysaccharide
GO:0042347 P negative regulation of NIK/NF-kappaB signaling
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 C intracellular membrane-bounded organelle
GO:0050699 F WW domain binding
GO:0071222 P cellular response to lipopolysaccharide
3431 O_BomoOtmSK13089_complete:A_BomoOtmSK_comp14557_c0_seq4
131bp
 lipopolysaccharide-induced_tumor_necrosis_factor-alpha_factor_homolog_isoform_X1_[Bombyx_mori]
GO:0001817 P regulation of cytokine production
GO:0004871 F obsolete signal transducer activity
GO:0005576 C extracellular region
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007165 P signal transduction
GO:0007568 P aging
GO:0016020 C membrane
GO:0032496 P response to lipopolysaccharide
GO:0042347 P negative regulation of NIK/NF-kappaB signaling
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 C intracellular membrane-bounded organelle
GO:0050699 F WW domain binding
GO:0071222 P cellular response to lipopolysaccharide
3432 O_BomoOtmSK1308_complete:A_BomoOtmSK_comp4855_c0_seq1
338bp
 LOW_QUALITY_PROTEIN:_growth_hormone-regulated_TBC_protein_1-A_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005622 C intracellular anatomical structure
GO:0006886 P intracellular protein transport
GO:0012505 C endomembrane system
GO:0017137 F small GTPase binding
GO:0031338 P regulation of vesicle fusion
GO:0090630 P activation of GTPase activity
3433 O_BomoOtmSK13090_complete:A_BomoOtmSK_comp14557_c0_seq5
131bp
 lipopolysaccharide-induced_tumor_necrosis_factor-alpha_factor_homolog_isoform_X1_[Bombyx_mori]
GO:0001817 P regulation of cytokine production
GO:0004871 F obsolete signal transducer activity
GO:0005576 C extracellular region
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007165 P signal transduction
GO:0007568 P aging
GO:0016020 C membrane
GO:0032496 P response to lipopolysaccharide
GO:0042347 P negative regulation of NIK/NF-kappaB signaling
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 C intracellular membrane-bounded organelle
GO:0050699 F WW domain binding
GO:0071222 P cellular response to lipopolysaccharide
3434 O_BomoOtmSK13091_complete:A_BomoOtmSK_comp14557_c0_seq5
101bp
 lipopolysaccharide-induced_tumor_necrosis_factor-alpha_factor_homolog_isoform_X1_[Bombyx_mori]
3435 O_BomoOtmSK13092_complete:A_BomoOtmSK_comp14559_c0_seq1
298bp
 PIH1_domain-containing_protein_1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
3436 O_BomoOtmSK13093_complete:A_BomoOtmSK_comp14559_c0_seq2
302bp
 PIH1_domain-containing_protein_1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
3437 O_BomoOtmSK13094_complete:A_BomoOtmSK_comp14559_c0_seq3
249bp
 PIH1_domain-containing_protein_1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
3438 O_BomoOtmSK13095_complete:A_BomoOtmSK_comp14559_c0_seq4
249bp
 PIH1_domain-containing_protein_1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
3439 O_BomoOtmSK13096_3prime_partial:A_BomoOtmSK_comp14560_c0_seq1
592bp
 sorting_nexin-29_isoform_X1_[Bombyx_mori]
GO:0035091 F phosphatidylinositol binding
3440 O_BomoOtmSK13097_complete:A_BomoOtmSK_comp14560_c0_seq1
100bp
3441 O_BomoOtmSK13098_complete:A_BomoOtmSK_comp14560_c0_seq2
656bp
 sorting_nexin-29_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0035091 F phosphatidylinositol binding
GO:0070062 C extracellular exosome
3442 O_BomoOtmSK13099_complete:A_BomoOtmSK_comp14560_c0_seq2
100bp
3443 O_BomoOtmSK1309_internal:A_BomoOtmSK_comp4857_c0_seq1
140bp
3444 O_BomoOtmSK130_complete:A_BomoOtmSK_comp504_c0_seq1
186bp
 LOW_QUALITY_PROTEIN:_dynein_heavy_chain_8,_axonemal_[Bombyx_mori]
3445 O_BomoOtmSK13100_complete:A_BomoOtmSK_comp14561_c0_seq1
499bp
 connectin_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007275 P multicellular organism development
GO:0007413 P axonal fasciculation
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016200 P synaptic target attraction
GO:0031225 C anchored component of membrane
GO:0031594 C neuromuscular junction
GO:0044295 C axonal growth cone
3446 O_BomoOtmSK13101_complete:A_BomoOtmSK_comp14562_c0_seq1
143bp
 PREDICTED:_synaptosomal-associated_protein_25_isoform_X4_[Papilio_xuthus]
GO:0000149 F SNARE binding
GO:0005484 F SNAP receptor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006893 P Golgi to plasma membrane transport
GO:0006906 P vesicle fusion
GO:0007268 P chemical synaptic transmission
GO:0007269 P neurotransmitter secretion
GO:0007274 P neuromuscular synaptic transmission
GO:0016020 C membrane
GO:0016081 P synaptic vesicle docking
GO:0016082 P synaptic vesicle priming
GO:0016192 P vesicle-mediated transport
GO:0019905 F syntaxin binding
GO:0030054 C cell junction
GO:0031083 C BLOC-1 complex
GO:0031201 C SNARE complex
GO:0031629 P synaptic vesicle fusion to presynaptic active zone membrane
GO:0043005 C neuron projection
GO:0043195 C terminal bouton
GO:0045202 C synapse
GO:0048172 P regulation of short-term neuronal synaptic plasticity
GO:0048489 P synaptic vesicle transport
3447 O_BomoOtmSK13102_complete:A_BomoOtmSK_comp14562_c0_seq1
111bp
 synaptosomal-associated_protein_25_isoform_X2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0031083 C BLOC-1 complex
GO:0031201 C SNARE complex
GO:0043005 C neuron projection
GO:0045202 C synapse
GO:0048471 C perinuclear region of cytoplasm
3448 O_BomoOtmSK13103_complete:A_BomoOtmSK_comp14562_c0_seq2
212bp
 synaptosomal-associated_protein_25_isoform_X3_[Bombyx_mori]
GO:0000149 F SNARE binding
GO:0005484 F SNAP receptor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006893 P Golgi to plasma membrane transport
GO:0006906 P vesicle fusion
GO:0007268 P chemical synaptic transmission
GO:0007269 P neurotransmitter secretion
GO:0007274 P neuromuscular synaptic transmission
GO:0016020 C membrane
GO:0016081 P synaptic vesicle docking
GO:0016082 P synaptic vesicle priming
GO:0016192 P vesicle-mediated transport
GO:0019905 F syntaxin binding
GO:0030054 C cell junction
GO:0031083 C BLOC-1 complex
GO:0031201 C SNARE complex
GO:0031629 P synaptic vesicle fusion to presynaptic active zone membrane
GO:0043005 C neuron projection
GO:0043195 C terminal bouton
GO:0045202 C synapse
GO:0048172 P regulation of short-term neuronal synaptic plasticity
GO:0048489 P synaptic vesicle transport
3449 O_BomoOtmSK13104_complete:A_BomoOtmSK_comp14563_c0_seq1
104bp
 uncharacterized_protein_LOC110385782_[Bombyx_mori]
3450 O_BomoOtmSK13105_5prime_partial:A_BomoOtmSK_comp14564_c0_seq2
112bp
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