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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2971 O_BomoOtmSK12675_complete:A_BomoOtmSK_comp14397_c0_seq1
341bp
 metallophosphoesterase_1_homolog_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
2972 O_BomoOtmSK12676_complete:A_BomoOtmSK_comp14397_c0_seq2
367bp
 metallophosphoesterase_1_isoform_X1_[Bombyx_mori]
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0005801 C cis-Golgi network
GO:0006506 P GPI anchor biosynthetic process
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0008081 F phosphoric diester hydrolase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0016787 F hydrolase activity
GO:0030145 F manganese ion binding
GO:0033116 C endoplasmic reticulum-Golgi intermediate compartment membrane
GO:0034235 F GPI anchor binding
GO:0046872 F metal ion binding
GO:0070971 C endoplasmic reticulum exit site
2973 O_BomoOtmSK12677_5prime_partial:A_BomoOtmSK_comp14398_c0_seq1
395bp
 growth/differentiation_factor_8_[Bombyx_mori]
GO:0005125 F cytokine activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0008083 F growth factor activity
GO:0008201 F heparin binding
GO:0040007 P growth
2974 O_BomoOtmSK12678_complete:A_BomoOtmSK_comp14398_c0_seq2
265bp
 growth/differentiation_factor_8_[Bombyx_mori]
GO:0005125 F cytokine activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0008083 F growth factor activity
GO:0008201 F heparin binding
GO:0040007 P growth
2975 O_BomoOtmSK12679_5prime_partial:A_BomoOtmSK_comp14399_c0_seq1
192bp
 uncharacterized_protein_LOC101744188_[Bombyx_mori]
2976 O_BomoOtmSK1267_complete:A_BomoOtmSK_comp4815_c0_seq1
111bp
2977 O_BomoOtmSK12680_complete:A_BomoOtmSK_comp14400_c0_seq1
723bp
 N-alpha-acetyltransferase_35,_NatC_auxiliary_subunit_isoform_X1_[Bombyx_mori]
GO:0001756 P somitogenesis
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0007275 P multicellular organism development
GO:0008284 P positive regulation of cell population proliferation
GO:0031417 C NatC complex
GO:0032006 P regulation of TOR signaling
GO:0043066 P negative regulation of apoptotic process
GO:0048514 P blood vessel morphogenesis
GO:0048659 P smooth muscle cell proliferation
2978 O_BomoOtmSK12681_complete:A_BomoOtmSK_comp14400_c0_seq1
128bp
2979 O_BomoOtmSK12682_complete:A_BomoOtmSK_comp14400_c0_seq2
710bp
 N-alpha-acetyltransferase_35,_NatC_auxiliary_subunit_isoform_X2_[Bombyx_mori]
GO:0001756 P somitogenesis
GO:0005737 C cytoplasm
GO:0005844 C polysome
GO:0007275 P multicellular organism development
GO:0008284 P positive regulation of cell population proliferation
GO:0031417 C NatC complex
GO:0032006 P regulation of TOR signaling
GO:0043066 P negative regulation of apoptotic process
GO:0048514 P blood vessel morphogenesis
GO:0048659 P smooth muscle cell proliferation
2980 O_BomoOtmSK12683_complete:A_BomoOtmSK_comp14400_c0_seq2
128bp
2981 O_BomoOtmSK12684_complete:A_BomoOtmSK_comp14403_c0_seq1
1398bp
 uncharacterized_protein_LOC101746073_[Bombyx_mori]
GO:0000272 P polysaccharide catabolic process
GO:0004553 F hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004568 F chitinase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005764 C lysosome
GO:0005975 P carbohydrate metabolic process
GO:0006030 P chitin metabolic process
GO:0006032 P chitin catabolic process
GO:0006955 P immune response
GO:0008061 F chitin binding
GO:0008152 P metabolic process
GO:0008843 F endochitinase activity
GO:0009617 P response to bacterium
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
2982 O_BomoOtmSK12685_complete:A_BomoOtmSK_comp14403_c0_seq1
145bp
2983 O_BomoOtmSK12686_complete:A_BomoOtmSK_comp14404_c0_seq1
555bp
 rho_GTPase-activating_protein_39_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0007165 P signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
2984 O_BomoOtmSK12687_complete:A_BomoOtmSK_comp14404_c0_seq1
127bp
2985 O_BomoOtmSK12688_complete:A_BomoOtmSK_comp14404_c0_seq1
105bp
2986 O_BomoOtmSK12689_complete:A_BomoOtmSK_comp14404_c0_seq2
716bp
 rho_GTPase-activating_protein_39_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0007165 P signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
2987 O_BomoOtmSK1268_internal:A_BomoOtmSK_comp4817_c0_seq1
272bp
 pregnancy_zone_protein_[Bombyx_mori]
GO:0004866 F endopeptidase inhibitor activity
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0007566 P embryo implantation
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
GO:0032403 F protein-containing complex binding
GO:0048403 F brain-derived neurotrophic factor binding
GO:0048406 F nerve growth factor binding
2988 O_BomoOtmSK12690_complete:A_BomoOtmSK_comp14404_c0_seq2
127bp
2989 O_BomoOtmSK12691_complete:A_BomoOtmSK_comp14404_c0_seq2
105bp
2990 O_BomoOtmSK12692_3prime_partial:A_BomoOtmSK_comp14405_c0_seq1
657bp
 interference_hedgehog_isoform_X1_[Bombyx_mori]
GO:0007224 P smoothened signaling pathway
GO:0008201 F heparin binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042803 F protein homodimerization activity
GO:0097108 F hedgehog family protein binding
2991 O_BomoOtmSK12693_5prime_partial:A_BomoOtmSK_comp14405_c0_seq1
100bp
2992 O_BomoOtmSK12694_3prime_partial:A_BomoOtmSK_comp14406_c0_seq1
111bp
 cysteine_protease_ATG4B_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000422 P autophagy of mitochondrion
GO:0004197 F cysteine-type endopeptidase activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006501 P C-terminal protein lipidation
GO:0006508 P proteolysis
GO:0006612 P protein targeting to membrane
GO:0006810 P transport
GO:0006914 P autophagy
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0015031 P protein transport
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0044804 P autophagy of nucleus
GO:0051697 P protein delipidation
2993 O_BomoOtmSK12695_complete:A_BomoOtmSK_comp14406_c0_seq2
384bp
 cysteine_protease_ATG4B_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000422 P autophagy of mitochondrion
GO:0004197 F cysteine-type endopeptidase activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006501 P C-terminal protein lipidation
GO:0006508 P proteolysis
GO:0006612 P protein targeting to membrane
GO:0006810 P transport
GO:0006914 P autophagy
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0015031 P protein transport
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0044804 P autophagy of nucleus
GO:0051697 P protein delipidation
2994 O_BomoOtmSK12696_complete:A_BomoOtmSK_comp14406_c0_seq3
178bp
 cysteine_protease_ATG4B_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000422 P autophagy of mitochondrion
GO:0004197 F cysteine-type endopeptidase activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006501 P C-terminal protein lipidation
GO:0006508 P proteolysis
GO:0006612 P protein targeting to membrane
GO:0006810 P transport
GO:0006914 P autophagy
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0015031 P protein transport
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0044804 P autophagy of nucleus
GO:0051697 P protein delipidation
2995 O_BomoOtmSK12697_3prime_partial:A_BomoOtmSK_comp14408_c1_seq1
714bp
 thioredoxin_domain-containing_protein_11_[Bombyx_mori]
GO:0003756 F protein disulfide isomerase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006457 P protein folding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034976 P response to endoplasmic reticulum stress
GO:0045454 P cell redox homeostasis
2996 O_BomoOtmSK12698_complete:A_BomoOtmSK_comp14409_c0_seq1
300bp
 mitochondrial_prohibitin_complex_protein_2_[Bombyx_mori]
GO:0000060 P obsolete protein import into nucleus, translocation
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005743 C mitochondrial inner membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007005 P mitochondrion organization
GO:0007062 P sister chromatid cohesion
GO:0008022 F protein C-terminus binding
GO:0008150 P biological_process
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016363 C nuclear matrix
GO:0031536 P positive regulation of exit from mitosis
GO:0033147 P negative regulation of intracellular estrogen receptor signaling pathway
GO:0033218 F amide binding
GO:0033600 P negative regulation of mammary gland epithelial cell proliferation
GO:0043066 P negative regulation of apoptotic process
GO:0043234 C protein-containing complex
GO:0043433 P negative regulation of DNA-binding transcription factor activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0047485 F protein N-terminus binding
GO:0050821 P protein stabilization
GO:0051091 P positive regulation of DNA-binding transcription factor activity
GO:0060744 P mammary gland branching involved in thelarche
GO:0060749 P mammary gland alveolus development
GO:0060762 P regulation of branching involved in mammary gland duct morphogenesis
GO:0070062 C extracellular exosome
GO:0070374 P positive regulation of ERK1 and ERK2 cascade
GO:0071944 C cell periphery
GO:1902808 P positive regulation of cell cycle G1/S phase transition
2997 O_BomoOtmSK12699_internal:A_BomoOtmSK_comp14410_c0_seq1
477bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Amyelois_transitella]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
2998 O_BomoOtmSK1269_5prime_partial:A_BomoOtmSK_comp4817_c0_seq1
104bp
2999 O_BomoOtmSK126_3prime_partial:A_BomoOtmSK_comp485_c1_seq1
115bp
 uncharacterized_protein_LOC101739011_[Bombyx_mori]
3000 O_BomoOtmSK12700_complete:A_BomoOtmSK_comp14410_c0_seq1
138bp
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