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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2941 O_BomoOtmSK12648_complete:A_BomoOtmSK_comp14388_c0_seq2
256bp
2942 O_BomoOtmSK12649_5prime_partial:A_BomoOtmSK_comp14391_c1_seq1
154bp
 BAH_and_coiled-coil_domain-containing_protein_1_isoform_X1_[Bombyx_mori]
GO:0000785 C chromatin
GO:0000976 F transcription cis-regulatory region binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005677 C chromatin silencing complex
GO:0005694 C chromosome
GO:0006342 P heterochromatin assembly
GO:0007275 P multicellular organism development
GO:0007560 P imaginal disc morphogenesis
GO:0030154 P cell differentiation
GO:0031507 P heterochromatin assembly
2943 O_BomoOtmSK1264_5prime_partial:A_BomoOtmSK_comp4809_c0_seq1
127bp
 LOW_QUALITY_PROTEIN:_protein_sidekick_[Bombyx_mori]
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042675 P compound eye cone cell differentiation
GO:0046533 P negative regulation of photoreceptor cell differentiation
GO:0050931 P pigment cell differentiation
GO:0098595 C perivitelline space
2944 O_BomoOtmSK12650_complete:A_BomoOtmSK_comp14391_c1_seq1
118bp
2945 O_BomoOtmSK12651_internal:A_BomoOtmSK_comp14392_c0_seq1
1582bp
 zinc_finger_FYVE_domain-containing_protein_26_homolog_[Bombyx_mori]
GO:0046872 F metal ion binding
2946 O_BomoOtmSK12652_complete:A_BomoOtmSK_comp14392_c0_seq1
118bp
2947 O_BomoOtmSK12653_3prime_partial:A_BomoOtmSK_comp14392_c0_seq2
403bp
 zinc_finger_FYVE_domain-containing_protein_26_homolog_[Bombyx_mori]
2948 O_BomoOtmSK12654_internal:A_BomoOtmSK_comp14392_c0_seq4
1228bp
 zinc_finger_FYVE_domain-containing_protein_26_homolog_[Bombyx_mori]
GO:0046872 F metal ion binding
2949 O_BomoOtmSK12655_complete:A_BomoOtmSK_comp14392_c0_seq4
118bp
2950 O_BomoOtmSK12656_internal:A_BomoOtmSK_comp14392_c0_seq5
354bp
 zinc_finger_FYVE_domain-containing_protein_26_homolog_[Bombyx_mori]
2951 O_BomoOtmSK12657_3prime_partial:A_BomoOtmSK_comp14392_c1_seq1
1229bp
 zinc_finger_FYVE_domain-containing_protein_26_homolog_[Bombyx_mori]
GO:0046872 F metal ion binding
2952 O_BomoOtmSK12658_complete:A_BomoOtmSK_comp14392_c1_seq1
118bp
2953 O_BomoOtmSK12659_internal:A_BomoOtmSK_comp14392_c1_seq2
823bp
 zinc_finger_FYVE_domain-containing_protein_26_homolog_[Bombyx_mori]
GO:0046872 F metal ion binding
2954 O_BomoOtmSK1265_complete:A_BomoOtmSK_comp4811_c0_seq1
304bp
 vacuolar_protein_sorting-associated_protein_37A_[Bombyx_mori]
GO:0000813 C ESCRT I complex
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005813 C centrosome
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031902 C late endosome membrane
GO:0043162 P ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0043231 C intracellular membrane-bounded organelle
2955 O_BomoOtmSK12660_complete:A_BomoOtmSK_comp14392_c1_seq2
118bp
2956 O_BomoOtmSK12661_complete:A_BomoOtmSK_comp14393_c0_seq1
503bp
 bifunctional_coenzyme_A_synthase_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004140 F dephospho-CoA kinase activity
GO:0004595 F pantetheine-phosphate adenylyltransferase activity
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008152 P metabolic process
GO:0009058 P biosynthetic process
GO:0015937 P coenzyme A biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0070062 C extracellular exosome
2957 O_BomoOtmSK12662_complete:A_BomoOtmSK_comp14393_c0_seq2
224bp
 bifunctional_coenzyme_A_synthase_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004140 F dephospho-CoA kinase activity
GO:0004595 F pantetheine-phosphate adenylyltransferase activity
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008152 P metabolic process
GO:0009058 P biosynthetic process
GO:0015937 P coenzyme A biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0070062 C extracellular exosome
2958 O_BomoOtmSK12663_complete:A_BomoOtmSK_comp14393_c0_seq2
170bp
 bifunctional_coenzyme_A_synthase_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004140 F dephospho-CoA kinase activity
GO:0004595 F pantetheine-phosphate adenylyltransferase activity
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008152 P metabolic process
GO:0009058 P biosynthetic process
GO:0015937 P coenzyme A biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0070062 C extracellular exosome
2959 O_BomoOtmSK12664_complete:A_BomoOtmSK_comp14393_c0_seq3
533bp
 bifunctional_coenzyme_A_synthase_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004140 F dephospho-CoA kinase activity
GO:0004595 F pantetheine-phosphate adenylyltransferase activity
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008152 P metabolic process
GO:0009058 P biosynthetic process
GO:0015937 P coenzyme A biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0070062 C extracellular exosome
2960 O_BomoOtmSK12665_complete:A_BomoOtmSK_comp14393_c0_seq4
224bp
 bifunctional_coenzyme_A_synthase_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004140 F dephospho-CoA kinase activity
GO:0004595 F pantetheine-phosphate adenylyltransferase activity
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008152 P metabolic process
GO:0009058 P biosynthetic process
GO:0015937 P coenzyme A biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0070062 C extracellular exosome
2961 O_BomoOtmSK12666_complete:A_BomoOtmSK_comp14393_c0_seq4
200bp
 bifunctional_coenzyme_A_synthase_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004140 F dephospho-CoA kinase activity
GO:0004595 F pantetheine-phosphate adenylyltransferase activity
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0008152 P metabolic process
GO:0009058 P biosynthetic process
GO:0015937 P coenzyme A biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0070062 C extracellular exosome
2962 O_BomoOtmSK12667_5prime_partial:A_BomoOtmSK_comp14394_c0_seq1
496bp
 uncharacterized_protein_LOC101743105_[Bombyx_mori]
2963 O_BomoOtmSK12668_complete:A_BomoOtmSK_comp14394_c0_seq1
114bp
2964 O_BomoOtmSK12669_complete:A_BomoOtmSK_comp14395_c0_seq1
315bp
 ribokinase-like_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004747 F ribokinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0006014 P D-ribose metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019303 P D-ribose catabolic process
GO:0046835 P carbohydrate phosphorylation
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
2965 O_BomoOtmSK1266_3prime_partial:A_BomoOtmSK_comp4815_c0_seq1
261bp
 CD151_antigen_isoform_X1_[Bombyx_mori]
GO:0005178 F integrin binding
GO:0005515 F protein binding
GO:0005604 C basement membrane
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016477 P cell migration
GO:0031581 P hemidesmosome assembly
GO:0042098 P T cell proliferation
2966 O_BomoOtmSK12670_complete:A_BomoOtmSK_comp14395_c0_seq2
111bp
 ribokinase-like_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004747 F ribokinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0006014 P D-ribose metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019303 P D-ribose catabolic process
GO:0046835 P carbohydrate phosphorylation
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
2967 O_BomoOtmSK12671_complete:A_BomoOtmSK_comp14395_c0_seq3
257bp
 ribokinase-like_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004747 F ribokinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0006014 P D-ribose metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019303 P D-ribose catabolic process
GO:0046835 P carbohydrate phosphorylation
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
2968 O_BomoOtmSK12672_3prime_partial:A_BomoOtmSK_comp14396_c0_seq1
1530bp
 transcription_elongation_factor_SPT6_[Bombyx_mori]
GO:0000176 C nuclear exosome (RNase complex)
GO:0002805 P regulation of antimicrobial peptide biosynthetic process
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005703 C polytene chromosome puff
GO:0005705 C polytene chromosome interband
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0008023 C transcription elongation factor complex
GO:0030707 P ovarian follicle cell development
GO:0032784 P regulation of DNA-templated transcription, elongation
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035101 C FACT complex
GO:0035327 C euchromatin
GO:0035363 C histone locus body
2969 O_BomoOtmSK12673_complete:A_BomoOtmSK_comp14396_c0_seq1
206bp
2970 O_BomoOtmSK12674_complete:A_BomoOtmSK_comp14396_c0_seq1
121bp
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