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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2911 O_BomoOtmSK12620_complete:A_BomoOtmSK_comp14378_c0_seq1
679bp
 zinc_finger_protein_3_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0046872 F metal ion binding
2912 O_BomoOtmSK12621_complete:A_BomoOtmSK_comp14378_c0_seq1
172bp
2913 O_BomoOtmSK12622_complete:A_BomoOtmSK_comp14378_c0_seq1
167bp
2914 O_BomoOtmSK12623_complete:A_BomoOtmSK_comp14378_c0_seq1
132bp
2915 O_BomoOtmSK12624_complete:A_BomoOtmSK_comp14378_c0_seq1
103bp
2916 O_BomoOtmSK12625_3prime_partial:A_BomoOtmSK_comp14378_c0_seq3
709bp
 zinc_finger_protein_3_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0046872 F metal ion binding
2917 O_BomoOtmSK12626_complete:A_BomoOtmSK_comp14378_c0_seq3
172bp
2918 O_BomoOtmSK12627_complete:A_BomoOtmSK_comp14378_c0_seq3
167bp
2919 O_BomoOtmSK12628_complete:A_BomoOtmSK_comp14378_c0_seq3
132bp
2920 O_BomoOtmSK12629_complete:A_BomoOtmSK_comp14378_c0_seq3
103bp
2921 O_BomoOtmSK1262_3prime_partial:A_BomoOtmSK_comp4804_c0_seq1
289bp
 diacylglycerol_kinase_epsilon_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004143 F diacylglycerol kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0007205 P protein kinase C-activating G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
2922 O_BomoOtmSK12630_3prime_partial:A_BomoOtmSK_comp14378_c0_seq4
685bp
 zinc_finger_protein_3_homolog_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
2923 O_BomoOtmSK12631_complete:A_BomoOtmSK_comp14378_c0_seq4
172bp
2924 O_BomoOtmSK12632_complete:A_BomoOtmSK_comp14378_c0_seq4
167bp
2925 O_BomoOtmSK12633_complete:A_BomoOtmSK_comp14378_c0_seq4
132bp
2926 O_BomoOtmSK12634_complete:A_BomoOtmSK_comp14378_c0_seq4
107bp
2927 O_BomoOtmSK12635_complete:A_BomoOtmSK_comp14381_c0_seq1
514bp
 zinc_finger_protein_391_isoform_X2_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0046872 F metal ion binding
2928 O_BomoOtmSK12636_complete:A_BomoOtmSK_comp14383_c0_seq1
391bp
 zinc_finger_and_BTB_domain-containing_protein_41_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
2929 O_BomoOtmSK12637_3prime_partial:A_BomoOtmSK_comp14384_c0_seq1
772bp
 serine/threonine-protein_phosphatase_4_regulatory_subunit_3_[Bombyx_mori]
GO:0000775 C chromosome, centromeric region
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006909 P phagocytosis
GO:0007391 P dorsal closure
GO:0007405 P neuroblast proliferation
GO:0008105 P protein localization
GO:0016020 C membrane
GO:0016601 P Rac protein signal transduction
GO:0030289 C protein phosphatase 4 complex
GO:0043505 C CENP-A containing nucleosome
GO:0055059 P asymmetric neuroblast division
2930 O_BomoOtmSK12638_complete:A_BomoOtmSK_comp14386_c0_seq1
511bp
 cytochrome_P450_CYP12A2_isoform_X1_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
2931 O_BomoOtmSK12639_complete:A_BomoOtmSK_comp14386_c0_seq2
279bp
 cytochrome_P450_CYP12A2_isoform_X1_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
2932 O_BomoOtmSK1263_3prime_partial:A_BomoOtmSK_comp4804_c0_seq2
399bp
 diacylglycerol_kinase_epsilon_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004143 F diacylglycerol kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0007205 P protein kinase C-activating G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
2933 O_BomoOtmSK12640_complete:A_BomoOtmSK_comp14386_c0_seq2
224bp
 cytochrome_P450_CYP12A2_isoform_X1_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
2934 O_BomoOtmSK12641_complete:A_BomoOtmSK_comp14387_c0_seq1
138bp
 uncharacterized_protein_LOC101742045_isoform_X2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0006099 P tricarboxylic acid cycle
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0030060 F L-malate dehydrogenase activity
GO:0055114 P obsolete oxidation-reduction process
2935 O_BomoOtmSK12642_complete:A_BomoOtmSK_comp14387_c0_seq3
112bp
 uncharacterized_protein_LOC101742045_isoform_X2_[Bombyx_mori]
2936 O_BomoOtmSK12643_complete:A_BomoOtmSK_comp14387_c0_seq4
185bp
 uncharacterized_protein_LOC101742045_isoform_X1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0006099 P tricarboxylic acid cycle
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0030060 F L-malate dehydrogenase activity
GO:0055114 P obsolete oxidation-reduction process
2937 O_BomoOtmSK12644_complete:A_BomoOtmSK_comp14387_c0_seq4
184bp
 uncharacterized_protein_LOC101742045_isoform_X2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0006099 P tricarboxylic acid cycle
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0030060 F L-malate dehydrogenase activity
GO:0055114 P obsolete oxidation-reduction process
2938 O_BomoOtmSK12645_complete:A_BomoOtmSK_comp14388_c0_seq1
664bp
 E3_ubiquitin-protein_ligase_MGRN1_isoform_X2_[Bombyx_mori]
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
2939 O_BomoOtmSK12646_complete:A_BomoOtmSK_comp14388_c0_seq1
206bp
2940 O_BomoOtmSK12647_complete:A_BomoOtmSK_comp14388_c0_seq2
572bp
 E3_ubiquitin-protein_ligase_MGRN1_isoform_X2_[Bombyx_mori]
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
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