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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2791 O_BomoOtmSK12512_complete:A_BomoOtmSK_comp14344_c0_seq1
564bp
 probable_ATP-dependent_RNA_helicase_DDX56_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0010501 P RNA secondary structure unwinding
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0042254 P ribosome biogenesis
GO:0044822 F RNA binding
2792 O_BomoOtmSK12513_5prime_partial:A_BomoOtmSK_comp14345_c0_seq1
194bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_KIAA1109_[Bombyx_mori]
GO:0001558 P regulation of cell growth
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030856 P regulation of epithelial cell differentiation
2793 O_BomoOtmSK12514_complete:A_BomoOtmSK_comp14346_c0_seq1
1572bp
 zinc_finger_protein_GLI4_isoform_X2_[Helicoverpa_armigera]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001205 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0002385 P mucosal immune response
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007224 P smoothened signaling pathway
GO:0007275 P multicellular organism development
GO:0007346 P regulation of mitotic cell cycle
GO:0007350 P blastoderm segmentation
GO:0007367 P segment polarity determination
GO:0008544 P epidermis development
GO:0016020 C membrane
GO:0030707 P ovarian follicle cell development
GO:0030858 P positive regulation of epithelial cell differentiation
GO:0035017 P cuticle pattern formation
GO:0035217 P labial disc development
GO:0035224 P genital disc anterior/posterior pattern formation
GO:0035277 P spiracle morphogenesis, open tracheal system
GO:0035301 C Hedgehog signaling complex
GO:0042803 F protein homodimerization activity
GO:0043234 C protein-containing complex
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048100 P wing disc anterior/posterior pattern formation
GO:0048477 P oogenesis
GO:0048592 P eye morphogenesis
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0060914 P heart formation
GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
2794 O_BomoOtmSK12515_complete:A_BomoOtmSK_comp14346_c0_seq1
225bp
 hypothetical_protein_WN55_00477_[Dufourea_novaeangliae]
2795 O_BomoOtmSK12516_complete:A_BomoOtmSK_comp14346_c0_seq1
212bp
 hypothetical_protein_PCYB_133360_[Plasmodium_cynomolgi_strain_B]
2796 O_BomoOtmSK12517_complete:A_BomoOtmSK_comp14346_c0_seq1
147bp
2797 O_BomoOtmSK12518_complete:A_BomoOtmSK_comp14346_c0_seq2
1572bp
 zinc_finger_protein_GLI4_isoform_X2_[Helicoverpa_armigera]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000980 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001205 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0002385 P mucosal immune response
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007224 P smoothened signaling pathway
GO:0007275 P multicellular organism development
GO:0007346 P regulation of mitotic cell cycle
GO:0007350 P blastoderm segmentation
GO:0007367 P segment polarity determination
GO:0008544 P epidermis development
GO:0016020 C membrane
GO:0030707 P ovarian follicle cell development
GO:0030858 P positive regulation of epithelial cell differentiation
GO:0035017 P cuticle pattern formation
GO:0035217 P labial disc development
GO:0035224 P genital disc anterior/posterior pattern formation
GO:0035277 P spiracle morphogenesis, open tracheal system
GO:0035301 C Hedgehog signaling complex
GO:0042803 F protein homodimerization activity
GO:0043234 C protein-containing complex
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048100 P wing disc anterior/posterior pattern formation
GO:0048477 P oogenesis
GO:0048592 P eye morphogenesis
GO:0048666 P neuron development
GO:0048813 P dendrite morphogenesis
GO:0060914 P heart formation
GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
2798 O_BomoOtmSK12519_complete:A_BomoOtmSK_comp14346_c0_seq2
225bp
 hypothetical_protein_WN55_00477_[Dufourea_novaeangliae]
2799 O_BomoOtmSK1251_complete:A_BomoOtmSK_comp4790_c0_seq2
505bp
 pancreatic_triacylglycerol_lipase_[Bombyx_mori]
GO:0004620 F phospholipase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0008201 F heparin binding
GO:0016020 C membrane
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0044241 P lipid digestion
GO:0052689 F carboxylic ester hydrolase activity
2800 O_BomoOtmSK12520_complete:A_BomoOtmSK_comp14346_c0_seq2
212bp
 hypothetical_protein_PCYB_133360_[Plasmodium_cynomolgi_strain_B]
2801 O_BomoOtmSK12521_complete:A_BomoOtmSK_comp14346_c0_seq2
147bp
2802 O_BomoOtmSK12522_complete:A_BomoOtmSK_comp14347_c0_seq1
256bp
 uncharacterized_protein_LOC101737252_[Bombyx_mori]
GO:0004889 F acetylcholine-gated cation-selective channel activity
GO:0005216 F ion channel activity
GO:0005230 F extracellular ligand-gated ion channel activity
GO:0005886 C plasma membrane
GO:0005892 C acetylcholine-gated channel complex
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007165 P signal transduction
GO:0007271 P synaptic transmission, cholinergic
GO:0007274 P neuromuscular synaptic transmission
GO:0015464 F acetylcholine receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0035094 P response to nicotine
GO:0042166 F acetylcholine binding
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0098655 P cation transmembrane transport
GO:0099565 P chemical synaptic transmission, postsynaptic
2803 O_BomoOtmSK12523_5prime_partial:A_BomoOtmSK_comp14347_c0_seq1
138bp
2804 O_BomoOtmSK12524_complete:A_BomoOtmSK_comp14349_c0_seq1
1188bp
 protein_suppressor_of_sable_isoform_X2_[Bombyx_mori]
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
2805 O_BomoOtmSK12525_complete:A_BomoOtmSK_comp14349_c0_seq1
106bp
2806 O_BomoOtmSK12526_complete:A_BomoOtmSK_comp14349_c0_seq2
1221bp
 protein_suppressor_of_sable_isoform_X1_[Bombyx_mori]
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
2807 O_BomoOtmSK12527_complete:A_BomoOtmSK_comp14349_c0_seq2
106bp
2808 O_BomoOtmSK12528_complete:A_BomoOtmSK_comp14350_c1_seq1
355bp
 BTB/POZ_domain_containing_protein_isoform_X1_[Bombyx_mori]
GO:0000932 C P-body
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0008150 P biological_process
2809 O_BomoOtmSK12529_complete:A_BomoOtmSK_comp14350_c1_seq2
592bp
 BTB/POZ_domain_containing_protein_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007399 P nervous system development
GO:0021987 P cerebral cortex development
GO:0048813 P dendrite morphogenesis
2810 O_BomoOtmSK1252_complete:A_BomoOtmSK_comp4790_c0_seq2
112bp
2811 O_BomoOtmSK12530_complete:A_BomoOtmSK_comp14350_c1_seq3
536bp
 BTB/POZ_domain_containing_protein_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007399 P nervous system development
GO:0021987 P cerebral cortex development
GO:0048813 P dendrite morphogenesis
2812 O_BomoOtmSK12531_complete:A_BomoOtmSK_comp14350_c1_seq4
299bp
 BTB/POZ_domain_containing_protein_[Bombyx_mori]
GO:0000932 C P-body
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0008150 P biological_process
2813 O_BomoOtmSK12532_complete:A_BomoOtmSK_comp14351_c0_seq1
890bp
 ER_degradation-enhancing_alpha-mannosidase-like_protein_3_[Bombyx_mori]
GO:0004559 F alpha-mannosidase activity
GO:0004569 F glycoprotein endo-alpha-1,2-mannosidase activity
GO:0004571 F mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509 F calcium ion binding
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006486 P protein glycosylation
GO:0006491 P N-glycan processing
GO:0006516 P glycoprotein catabolic process
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0044322 C endoplasmic reticulum quality control compartment
GO:0046872 F metal ion binding
GO:1904380 P endoplasmic reticulum mannose trimming
GO:1904382 P mannose trimming involved in glycoprotein ERAD pathway
2814 O_BomoOtmSK12533_complete:A_BomoOtmSK_comp14351_c0_seq1
110bp
2815 O_BomoOtmSK12534_complete:A_BomoOtmSK_comp14351_c0_seq1
102bp
2816 O_BomoOtmSK12535_internal:A_BomoOtmSK_comp14352_c0_seq1
304bp
2817 O_BomoOtmSK12536_internal:A_BomoOtmSK_comp14352_c0_seq1
304bp
2818 O_BomoOtmSK12537_internal:A_BomoOtmSK_comp14352_c0_seq1
304bp
 myosin_vi_[Danaus_plexippus_plexippus]
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005875 C microtubule associated complex
GO:0005938 C cell cortex
GO:0006997 P nucleus organization
GO:0007015 P actin filament organization
GO:0007051 P spindle organization
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0007286 P spermatid development
GO:0007291 P sperm individualization
GO:0007297 P ovarian follicle cell migration
GO:0007298 P border follicle cell migration
GO:0007391 P dorsal closure
GO:0007552 P metamorphosis
GO:0007560 P imaginal disc morphogenesis
GO:0008017 F microtubule binding
GO:0008104 P protein localization
GO:0008152 P metabolic process
GO:0008363 P larval chitin-based cuticle development
GO:0016333 P morphogenesis of follicular epithelium
GO:0016459 C myosin complex
GO:0016461 C unconventional myosin complex
GO:0019749 P cytoskeleton-dependent cytoplasmic transport, nurse cell to oocyte
GO:0030036 P actin cytoskeleton organization
GO:0030048 P actin filament-based movement
GO:0030139 C endocytic vesicle
GO:0030317 P flagellated sperm motility
GO:0030426 C growth cone
GO:0030589 P pseudocleavage involved in syncytial blastoderm formation
GO:0031476 C myosin VI complex
GO:0031941 C filamentous actin
GO:0032027 F myosin light chain binding
GO:0032880 P regulation of protein localization
GO:0032956 P regulation of actin cytoskeleton organization
GO:0032970 P regulation of actin filament-based process
GO:0040001 P establishment of mitotic spindle localization
GO:0042623 F ATP hydrolysis activity
GO:0043234 C protein-containing complex
GO:0045167 P asymmetric protein localization involved in cell fate determination
GO:0045172 C germline ring canal
GO:0045175 P basal protein localization
GO:0045178 C basal part of cell
GO:0045217 P cell-cell junction maintenance
GO:0045921 P positive regulation of exocytosis
GO:0047497 P mitochondrion transport along microtubule
GO:0048477 P oogenesis
GO:0051015 F actin filament binding
GO:0051647 P nucleus localization
GO:0055057 P neuroblast division
GO:0055059 P asymmetric neuroblast division
GO:0061024 P membrane organization
GO:0070856 F myosin VI light chain binding
GO:0070864 C sperm individualization complex
GO:0070865 C investment cone
2819 O_BomoOtmSK12538_3prime_partial:A_BomoOtmSK_comp14352_c0_seq2
909bp
 myosin-IB_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005903 C brush border
GO:0005938 C cell cortex
GO:0007368 P determination of left/right symmetry
GO:0007498 P mesoderm development
GO:0008152 P metabolic process
GO:0016459 C myosin complex
GO:0031941 C filamentous actin
GO:0032528 P microvillus organization
GO:0042623 F ATP hydrolysis activity
GO:0042742 P defense response to bacterium
GO:0048803 P imaginal disc-derived male genitalia morphogenesis
GO:0071907 P determination of digestive tract left/right asymmetry
2820 O_BomoOtmSK12539_5prime_partial:A_BomoOtmSK_comp14352_c0_seq2
456bp
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