SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/35878
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2761 O_BomoOtmSK12486_5prime_partial:A_BomoOtmSK_comp14332_c0_seq5
175bp
2762 O_BomoOtmSK12487_5prime_partial:A_BomoOtmSK_comp14332_c0_seq5
157bp
 exocyst_complex_component_1_[Bombyx_mori]
GO:0000145 C exocyst
GO:0005546 F phosphatidylinositol-4,5-bisphosphate binding
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0015031 P protein transport
GO:0016080 P synaptic vesicle targeting
GO:0016081 P synaptic vesicle docking
GO:0098793 C presynapse
2763 O_BomoOtmSK12488_complete:A_BomoOtmSK_comp14332_c0_seq5
108bp
 PREDICTED:_uncharacterized_protein_LOC105391048_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
2764 O_BomoOtmSK12489_complete:A_BomoOtmSK_comp14334_c0_seq1
202bp
 transmembrane_protein_267_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2765 O_BomoOtmSK1248_complete:A_BomoOtmSK_comp4789_c0_seq1
1399bp
 PHD_finger_protein_rhinoceros_isoform_X1_[Helicoverpa_armigera]
2766 O_BomoOtmSK12490_complete:A_BomoOtmSK_comp14335_c0_seq1
138bp
 U7_snRNA-associated_Sm-like_protein_LSm10_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005683 C U7 snRNP
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0015030 C Cajal body
GO:0017069 F snRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0071208 F histone pre-mRNA DCP binding
GO:0071209 F U7 snRNA binding
GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
2767 O_BomoOtmSK12491_complete:A_BomoOtmSK_comp14335_c0_seq2
138bp
 U7_snRNA-associated_Sm-like_protein_LSm10_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005683 C U7 snRNP
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0015030 C Cajal body
GO:0017069 F snRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0071208 F histone pre-mRNA DCP binding
GO:0071209 F U7 snRNA binding
GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
2768 O_BomoOtmSK12492_complete:A_BomoOtmSK_comp14335_c0_seq3
147bp
 U7_snRNA-associated_Sm-like_protein_LSm10_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005683 C U7 snRNP
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0015030 C Cajal body
GO:0017069 F snRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0071208 F histone pre-mRNA DCP binding
GO:0071209 F U7 snRNA binding
GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
2769 O_BomoOtmSK12493_complete:A_BomoOtmSK_comp14336_c0_seq1
601bp
 mucolipin-3_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007626 P locomotory behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042491 P inner ear auditory receptor cell differentiation
2770 O_BomoOtmSK12494_complete:A_BomoOtmSK_comp14337_c0_seq1
248bp
 cytochrome_b5-related_protein_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005811 C lipid droplet
GO:0006629 P lipid metabolic process
GO:0009055 F electron transfer activity
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
2771 O_BomoOtmSK12495_complete:A_BomoOtmSK_comp14337_c0_seq1
160bp
 cytochrome_b5-related_protein_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005811 C lipid droplet
GO:0006629 P lipid metabolic process
GO:0009055 F electron transfer activity
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
2772 O_BomoOtmSK12496_complete:A_BomoOtmSK_comp14337_c0_seq2
248bp
 cytochrome_b5-related_protein_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005811 C lipid droplet
GO:0006629 P lipid metabolic process
GO:0009055 F electron transfer activity
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
2773 O_BomoOtmSK12497_complete:A_BomoOtmSK_comp14337_c0_seq2
183bp
 cytochrome_b5-related_protein_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005811 C lipid droplet
GO:0006629 P lipid metabolic process
GO:0009055 F electron transfer activity
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
2774 O_BomoOtmSK12498_complete:A_BomoOtmSK_comp14337_c0_seq4
150bp
 gametocyte-specific_factor_1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0007283 P spermatogenesis
GO:0030154 P cell differentiation
GO:0046872 F metal ion binding
2775 O_BomoOtmSK12499_complete:A_BomoOtmSK_comp14337_c0_seq4
104bp
2776 O_BomoOtmSK1249_complete:A_BomoOtmSK_comp4790_c0_seq1
358bp
 pancreatic_triacylglycerol_lipase_[Bombyx_mori]
GO:0004620 F phospholipase activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0008201 F heparin binding
GO:0016020 C membrane
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0044241 P lipid digestion
GO:0052689 F carboxylic ester hydrolase activity
2777 O_BomoOtmSK124_3prime_partial:A_BomoOtmSK_comp482_c1_seq1
161bp
 insulin-like_receptor_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001556 P oocyte maturation
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005010 F insulin-like growth factor-activated receptor activity
GO:0005515 F protein binding
GO:0005520 F insulin-like growth factor binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0043548 F phosphatidylinositol 3-kinase binding
GO:0043560 F insulin receptor substrate binding
GO:0046777 P protein autophosphorylation
GO:0046872 F metal ion binding
GO:0048009 P insulin-like growth factor receptor signaling pathway
GO:0051262 P protein tetramerization
2778 O_BomoOtmSK12500_complete:A_BomoOtmSK_comp14337_c0_seq5
479bp
 cytochrome_b5-related_protein_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005811 C lipid droplet
GO:0006629 P lipid metabolic process
GO:0009055 F electron transfer activity
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
2779 O_BomoOtmSK12501_complete:A_BomoOtmSK_comp14337_c0_seq6
456bp
 cytochrome_b5-related_protein_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005811 C lipid droplet
GO:0006629 P lipid metabolic process
GO:0009055 F electron transfer activity
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
2780 O_BomoOtmSK12502_complete:A_BomoOtmSK_comp14338_c0_seq1
179bp
 uncharacterized_protein_LOC101740144_isoform_X2_[Bombyx_mori]
GO:0005179 F hormone activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0008083 F growth factor activity
2781 O_BomoOtmSK12503_complete:A_BomoOtmSK_comp14338_c0_seq5
157bp
 bombyxin_G-1-like_isoform_X3_[Bombyx_mori]
GO:0005179 F hormone activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0008083 F growth factor activity
2782 O_BomoOtmSK12504_complete:A_BomoOtmSK_comp14338_c0_seq6
100bp
 uncharacterized_protein_LOC101740144_isoform_X2_[Bombyx_mori]
2783 O_BomoOtmSK12505_internal:A_BomoOtmSK_comp14339_c0_seq1
338bp
 exonuclease_1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006298 P mismatch repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0008409 F 5'-3' exonuclease activity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0035312 F 5'-3' exodeoxyribonuclease activity
GO:0045145 F single-stranded DNA 5'-3' exodeoxyribonuclease activity
GO:0046872 F metal ion binding
GO:0048256 F flap endonuclease activity
GO:0051908 F double-stranded DNA 5'-3' exodeoxyribonuclease activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
2784 O_BomoOtmSK12506_5prime_partial:A_BomoOtmSK_comp14339_c0_seq1
174bp
2785 O_BomoOtmSK12507_5prime_partial:A_BomoOtmSK_comp14340_c0_seq2
124bp
2786 O_BomoOtmSK12508_complete:A_BomoOtmSK_comp14342_c0_seq1
100bp
2787 O_BomoOtmSK12509_complete:A_BomoOtmSK_comp14342_c1_seq1
375bp
 Cysteine-rich_with_EGF-like_domain_protein_2_[Operophtera_brumata]
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005783 C endoplasmic reticulum
2788 O_BomoOtmSK1250_complete:A_BomoOtmSK_comp4790_c0_seq1
109bp
2789 O_BomoOtmSK12510_complete:A_BomoOtmSK_comp14343_c0_seq1
139bp
 transmembrane_protein_179_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2790 O_BomoOtmSK12511_complete:A_BomoOtmSK_comp14343_c0_seq3
227bp
 transmembrane_protein_179_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
previous next from show/35878

- SilkBase 1999-2023 -