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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2101 O_BomoOtmSK11892_complete:A_BomoOtmSK_comp14107_c0_seq1
111bp
 peroxisome_biogenesis_factor_1_[Bombyx_mori]
2102 O_BomoOtmSK11893_5prime_partial:A_BomoOtmSK_comp14107_c0_seq1
106bp
2103 O_BomoOtmSK11894_complete:A_BomoOtmSK_comp14107_c0_seq2
794bp
 peroxisome_biogenesis_factor_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005829 C cytosol
GO:0006625 P protein targeting to peroxisome
GO:0006810 P transport
GO:0007031 P peroxisome organization
GO:0008022 F protein C-terminus binding
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016558 P protein import into peroxisome matrix
GO:0032403 F protein-containing complex binding
GO:0042623 F ATP hydrolysis activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0060152 P microtubule-based peroxisome localization
GO:0070062 C extracellular exosome
2104 O_BomoOtmSK11895_complete:A_BomoOtmSK_comp14107_c0_seq2
165bp
 peroxisome_biogenesis_factor_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005829 C cytosol
GO:0006625 P protein targeting to peroxisome
GO:0006810 P transport
GO:0007031 P peroxisome organization
GO:0008022 F protein C-terminus binding
GO:0008152 P metabolic process
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016558 P protein import into peroxisome matrix
GO:0032403 F protein-containing complex binding
GO:0042623 F ATP hydrolysis activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0060152 P microtubule-based peroxisome localization
GO:0070062 C extracellular exosome
2105 O_BomoOtmSK11896_complete:A_BomoOtmSK_comp14107_c0_seq2
148bp
2106 O_BomoOtmSK11897_complete:A_BomoOtmSK_comp14107_c0_seq2
124bp
2107 O_BomoOtmSK11898_complete:A_BomoOtmSK_comp14107_c0_seq2
119bp
2108 O_BomoOtmSK11899_complete:A_BomoOtmSK_comp14107_c0_seq2
117bp
2109 O_BomoOtmSK1189_complete:A_BomoOtmSK_comp4720_c0_seq2
110bp
2110 O_BomoOtmSK118_internal:A_BomoOtmSK_comp456_c0_seq1
139bp
 glucose_dehydrogenase_[FAD,_quinone]_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0008812 F choline dehydrogenase activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016614 F oxidoreductase activity, acting on CH-OH group of donors
GO:0019285 P glycine betaine biosynthetic process from choline
GO:0050660 F flavin adenine dinucleotide binding
GO:0055114 P obsolete oxidation-reduction process
2111 O_BomoOtmSK11900_complete:A_BomoOtmSK_comp14107_c0_seq3
977bp
 peroxisome_biogenesis_factor_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005829 C cytosol
GO:0006625 P protein targeting to peroxisome
GO:0006810 P transport
GO:0007031 P peroxisome organization
GO:0008022 F protein C-terminus binding
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016558 P protein import into peroxisome matrix
GO:0032403 F protein-containing complex binding
GO:0042623 F ATP hydrolysis activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0060152 P microtubule-based peroxisome localization
GO:0070062 C extracellular exosome
2112 O_BomoOtmSK11901_complete:A_BomoOtmSK_comp14107_c0_seq3
168bp
2113 O_BomoOtmSK11902_complete:A_BomoOtmSK_comp14107_c0_seq3
148bp
2114 O_BomoOtmSK11903_complete:A_BomoOtmSK_comp14107_c0_seq3
125bp
2115 O_BomoOtmSK11904_complete:A_BomoOtmSK_comp14107_c0_seq3
124bp
2116 O_BomoOtmSK11905_complete:A_BomoOtmSK_comp14107_c0_seq3
117bp
2117 O_BomoOtmSK11906_5prime_partial:A_BomoOtmSK_comp14109_c0_seq1
202bp
 uncharacterized_protein_LOC101738661_[Bombyx_mori]
GO:0001889 P liver development
GO:0004872 F signaling receptor activity
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0006612 P protein targeting to membrane
GO:0006614 P SRP-dependent cotranslational protein targeting to membrane
GO:0006620 P posttranslational protein targeting to endoplasmic reticulum membrane
GO:0006807 P nitrogen compound metabolic process
GO:0006810 P transport
GO:0010259 P multicellular organism aging
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0036498 P IRE1-mediated unfolded protein response
GO:0044822 F RNA binding
GO:0072001 P renal system development
2118 O_BomoOtmSK11907_complete:A_BomoOtmSK_comp14109_c0_seq1
131bp
2119 O_BomoOtmSK11908_5prime_partial:A_BomoOtmSK_comp14109_c0_seq1
109bp
2120 O_BomoOtmSK11909_3prime_partial:A_BomoOtmSK_comp14110_c0_seq1
190bp
 dipeptidyl_peptidase_8_[Bombyx_mori]
GO:0004177 F aminopeptidase activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006955 P immune response
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0008239 F dipeptidyl-peptidase activity
GO:0016787 F hydrolase activity
2121 O_BomoOtmSK1190_internal:A_BomoOtmSK_comp4722_c0_seq1
708bp
 phosphoinositide_3-kinase_regulatory_subunit_4_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005643 C nuclear pore
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005776 C autophagosome
GO:0005829 C cytosol
GO:0005930 C axoneme
GO:0006468 P protein phosphorylation
GO:0006623 P protein targeting to vacuole
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0016020 C membrane
GO:0016236 P macroautophagy
GO:0016301 F kinase activity
GO:0016303 F 1-phosphatidylinositol-3-kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030242 P autophagy of peroxisome
GO:0030670 C phagocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032465 P regulation of cytokinesis
GO:0032801 P receptor catabolic process
GO:0034162 P toll-like receptor 9 signaling pathway
GO:0034271 C phosphatidylinositol 3-kinase complex, class III, type I
GO:0034272 C phosphatidylinositol 3-kinase complex, class III, type II
GO:0035032 C phosphatidylinositol 3-kinase complex, class III
GO:0036092 P phosphatidylinositol-3-phosphate biosynthetic process
GO:0042149 P cellular response to glucose starvation
GO:0043552 P positive regulation of phosphatidylinositol 3-kinase activity
GO:0045324 P late endosome to vacuole transport
GO:0071561 C nucleus-vacuole junction
2122 O_BomoOtmSK11910_5prime_partial:A_BomoOtmSK_comp14110_c0_seq2
721bp
 dipeptidyl_peptidase_9_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004177 F aminopeptidase activity
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0016787 F hydrolase activity
2123 O_BomoOtmSK11911_complete:A_BomoOtmSK_comp14110_c0_seq2
109bp
2124 O_BomoOtmSK11912_5prime_partial:A_BomoOtmSK_comp14110_c0_seq2
106bp
2125 O_BomoOtmSK11913_complete:A_BomoOtmSK_comp14111_c0_seq1
236bp
 pre-mRNA-splicing_factor_Syf2_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0071004 C U2-type prespliceosome
GO:0071006 C U2-type catalytic step 1 spliceosome
GO:0071007 C U2-type catalytic step 2 spliceosome
GO:0071008 C U2-type post-mRNA release spliceosomal complex
2126 O_BomoOtmSK11914_complete:A_BomoOtmSK_comp14112_c0_seq1
273bp
 synaptic_vesicle_glycoprotein_2A_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005351 F carbohydrate:proton symporter activity
GO:0005354 F galactose transmembrane transporter activity
GO:0005355 F glucose transmembrane transporter activity
GO:0005365 F myo-inositol transmembrane transporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0010311 P lateral root formation
GO:0015145 F monosaccharide transmembrane transporter activity
GO:0015148 F D-xylose transmembrane transporter activity
GO:0015168 F glycerol transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015575 F mannitol transmembrane transporter activity
GO:0015576 F sorbitol transmembrane transporter activity
GO:0015591 F D-ribose transmembrane transporter activity
GO:0015752 P D-ribose transmembrane transport
GO:0015753 P D-xylose transmembrane transport
GO:0015757 P galactose transmembrane transport
GO:0015793 P glycerol transport
GO:0015795 P sorbitol transport
GO:0015797 P mannitol transport
GO:0015798 P myo-inositol transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0046323 P glucose import
GO:0055085 P transmembrane transport
GO:1904659 P glucose transmembrane transport
2127 O_BomoOtmSK11915_5prime_partial:A_BomoOtmSK_comp14112_c0_seq2
542bp
 synaptic_vesicle_glycoprotein_2A_[Bombyx_mori]
GO:0004872 F signaling receptor activity
GO:0005215 F transporter activity
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005911 C cell-cell junction
GO:0006810 P transport
GO:0006836 P neurotransmitter transport
GO:0006874 P cellular calcium ion homeostasis
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019901 F protein kinase binding
GO:0022857 F transmembrane transporter activity
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031594 C neuromuscular junction
GO:0043005 C neuron projection
GO:0045202 C synapse
GO:0048786 C presynaptic active zone
GO:0055085 P transmembrane transport
2128 O_BomoOtmSK11916_complete:A_BomoOtmSK_comp14112_c0_seq2
106bp
2129 O_BomoOtmSK11917_internal:A_BomoOtmSK_comp14113_c0_seq1
174bp
 PREDICTED:_uncharacterized_protein_LOC106710892_[Papilio_machaon]
2130 O_BomoOtmSK11918_3prime_partial:A_BomoOtmSK_comp14114_c0_seq1
399bp
 protein_SMG8_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0045859 P regulation of protein kinase activity
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