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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2071 O_BomoOtmSK11865_complete:A_BomoOtmSK_comp14096_c0_seq1
181bp
 uncharacterized_protein_CG1161_isoform_X2_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2072 O_BomoOtmSK11866_complete:A_BomoOtmSK_comp14096_c0_seq2
189bp
 uncharacterized_protein_CG1161_isoform_X2_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2073 O_BomoOtmSK11867_complete:A_BomoOtmSK_comp14096_c0_seq3
194bp
 uncharacterized_protein_CG1161_isoform_X1_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2074 O_BomoOtmSK11868_complete:A_BomoOtmSK_comp14098_c0_seq1
551bp
 endonuclease/exonuclease/phosphatase_family_domain-containing_protein_1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0006281 P DNA repair
2075 O_BomoOtmSK11869_complete:A_BomoOtmSK_comp14098_c0_seq1
136bp
2076 O_BomoOtmSK1186_complete:A_BomoOtmSK_comp4720_c0_seq1
495bp
 protein_spaetzle_3_[Bombyx_mori]
2077 O_BomoOtmSK11870_complete:A_BomoOtmSK_comp14098_c0_seq2
551bp
 endonuclease/exonuclease/phosphatase_family_domain-containing_protein_1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0006281 P DNA repair
2078 O_BomoOtmSK11871_complete:A_BomoOtmSK_comp14098_c0_seq2
136bp
2079 O_BomoOtmSK11872_3prime_partial:A_BomoOtmSK_comp14099_c0_seq1
192bp
 protein_GDAP2_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
2080 O_BomoOtmSK11873_3prime_partial:A_BomoOtmSK_comp14099_c0_seq1
145bp
2081 O_BomoOtmSK11874_3prime_partial:A_BomoOtmSK_comp14099_c0_seq2
192bp
 protein_GDAP2_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
2082 O_BomoOtmSK11875_complete:A_BomoOtmSK_comp14099_c0_seq2
116bp
2083 O_BomoOtmSK11876_3prime_partial:A_BomoOtmSK_comp14099_c0_seq3
192bp
 protein_GDAP2_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
2084 O_BomoOtmSK11877_complete:A_BomoOtmSK_comp14099_c0_seq3
122bp
2085 O_BomoOtmSK11878_complete:A_BomoOtmSK_comp14100_c0_seq1
1097bp
 polycomb_group_protein_Psc_[Bombyx_mori]
GO:0001047 F core promoter sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005704 C polytene chromosome band
GO:0005725 C intercalary heterochromatin
GO:0006338 P chromatin remodeling
GO:0006342 P heterochromatin assembly
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0007419 P ventral cord development
GO:0008270 F zinc ion binding
GO:0031519 C PcG protein complex
GO:0035102 C PRC1 complex
GO:0035186 P syncytial blastoderm mitotic cell cycle
GO:0046872 F metal ion binding
2086 O_BomoOtmSK11879_complete:A_BomoOtmSK_comp14100_c0_seq1
111bp
2087 O_BomoOtmSK1187_complete:A_BomoOtmSK_comp4720_c0_seq1
110bp
2088 O_BomoOtmSK11880_3prime_partial:A_BomoOtmSK_comp14102_c0_seq1
177bp
 double-stranded_RNA-binding_protein_Staufen_homolog_2_isoform_X2_[Bombyx_mori]
2089 O_BomoOtmSK11881_5prime_partial:A_BomoOtmSK_comp14102_c0_seq1
132bp
2090 O_BomoOtmSK11882_complete:A_BomoOtmSK_comp14102_c0_seq1
113bp
2091 O_BomoOtmSK11883_3prime_partial:A_BomoOtmSK_comp14102_c0_seq2
171bp
 double-stranded_RNA-binding_protein_Staufen_homolog_2_isoform_X2_[Bombyx_mori]
2092 O_BomoOtmSK11884_5prime_partial:A_BomoOtmSK_comp14102_c0_seq2
135bp
2093 O_BomoOtmSK11885_complete:A_BomoOtmSK_comp14102_c0_seq2
113bp
2094 O_BomoOtmSK11886_3prime_partial:A_BomoOtmSK_comp14102_c0_seq3
171bp
 double-stranded_RNA-binding_protein_Staufen_homolog_2_isoform_X2_[Bombyx_mori]
2095 O_BomoOtmSK11887_5prime_partial:A_BomoOtmSK_comp14102_c0_seq3
135bp
2096 O_BomoOtmSK11888_complete:A_BomoOtmSK_comp14102_c0_seq3
113bp
2097 O_BomoOtmSK11889_3prime_partial:A_BomoOtmSK_comp14102_c0_seq4
177bp
 double-stranded_RNA-binding_protein_Staufen_homolog_2_isoform_X2_[Bombyx_mori]
2098 O_BomoOtmSK1188_complete:A_BomoOtmSK_comp4720_c0_seq2
212bp
 protein_spaetzle_3_[Bombyx_mori]
2099 O_BomoOtmSK11890_5prime_partial:A_BomoOtmSK_comp14102_c0_seq4
132bp
2100 O_BomoOtmSK11891_complete:A_BomoOtmSK_comp14102_c0_seq4
113bp
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