SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/35878
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1981 O_BomoOtmSK11784_5prime_partial:A_BomoOtmSK_comp14058_c0_seq1
120bp
1982 O_BomoOtmSK11785_complete:A_BomoOtmSK_comp14060_c0_seq1
747bp
 vesicle-fusing_ATPase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005795 C Golgi stack
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0006909 P phagocytosis
GO:0007030 P Golgi organization
GO:0007269 P neurotransmitter secretion
GO:0007274 P neuromuscular synaptic transmission
GO:0008021 C synaptic vesicle
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016082 P synaptic vesicle priming
GO:0016192 P vesicle-mediated transport
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0031629 P synaptic vesicle fusion to presynaptic active zone membrane
GO:0032403 F protein-containing complex binding
GO:0035494 P SNARE complex disassembly
GO:0043001 P Golgi to plasma membrane protein transport
GO:0043195 C terminal bouton
GO:0046872 F metal ion binding
GO:0048172 P regulation of short-term neuronal synaptic plasticity
GO:0048211 P Golgi vesicle docking
GO:0098527 C neuromuscular junction of somatic muscle
GO:1900073 P regulation of neuromuscular synaptic transmission
1983 O_BomoOtmSK11786_complete:A_BomoOtmSK_comp14060_c0_seq1
249bp
 Hitcher_protein_[Manduca_sexta]
1984 O_BomoOtmSK11787_complete:A_BomoOtmSK_comp14060_c0_seq1
154bp
1985 O_BomoOtmSK11788_complete:A_BomoOtmSK_comp14060_c0_seq1
128bp
1986 O_BomoOtmSK11789_3prime_partial:A_BomoOtmSK_comp14061_c0_seq1
278bp
 protein_N-terminal_asparagine_amidohydrolase_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0008418 F protein-N-terminal asparagine amidohydrolase activity
GO:0016787 F hydrolase activity
1987 O_BomoOtmSK1178_complete:A_BomoOtmSK_comp4691_c0_seq2
461bp
 proton-coupled_amino_acid_transporter_2_[Bombyx_mori]
GO:0003333 P amino acid transmembrane transport
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015180 F L-alanine transmembrane transporter activity
GO:0015193 F L-proline transmembrane transporter activity
GO:0015196 F L-tryptophan transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015808 P L-alanine transport
GO:0015824 P proline transport
GO:0015827 P tryptophan transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035524 P proline transmembrane transport
1988 O_BomoOtmSK11790_complete:A_BomoOtmSK_comp14061_c0_seq1
172bp
1989 O_BomoOtmSK11791_internal:A_BomoOtmSK_comp14063_c0_seq1
364bp
 tyrosine-protein_phosphatase_non-receptor_type_9_isoform_X2_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0004726 F non-membrane spanning protein tyrosine phosphatase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006470 P protein dephosphorylation
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
1990 O_BomoOtmSK11792_5prime_partial:A_BomoOtmSK_comp14063_c0_seq1
158bp
1991 O_BomoOtmSK11793_3prime_partial:A_BomoOtmSK_comp14063_c0_seq1
106bp
 LP08165p_[Drosophila_melanogaster]
1992 O_BomoOtmSK11794_5prime_partial:A_BomoOtmSK_comp14063_c0_seq2
158bp
1993 O_BomoOtmSK11795_complete:A_BomoOtmSK_comp14064_c0_seq2
174bp
 protein_cereblon-like_[Bombyx_mori]
GO:0046872 F metal ion binding
1994 O_BomoOtmSK11796_complete:A_BomoOtmSK_comp14064_c0_seq3
114bp
 protein_cereblon-like_[Bombyx_mori]
1995 O_BomoOtmSK11797_complete:A_BomoOtmSK_comp14065_c0_seq1
370bp
 decapentaplegic_isoform_X1_[Bombyx_mori]
GO:0001708 P cell fate specification
GO:0001709 P cell fate determination
GO:0001715 P ectodermal cell fate specification
GO:0001745 P compound eye morphogenesis
GO:0005125 F cytokine activity
GO:0005160 F transforming growth factor beta receptor binding
GO:0005515 F protein binding
GO:0005518 F collagen binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005622 C intracellular anatomical structure
GO:0005768 C endosome
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007281 P germ cell development
GO:0007304 P chorion-containing eggshell formation
GO:0007313 P maternal specification of dorsal/ventral axis, oocyte, soma encoded
GO:0007352 P zygotic specification of dorsal/ventral axis
GO:0007354 P zygotic determination of anterior/posterior axis, embryo
GO:0007378 P amnioserosa formation
GO:0007391 P dorsal closure
GO:0007393 P dorsal closure, leading edge cell fate determination
GO:0007398 P ectoderm development
GO:0007423 P sensory organ development
GO:0007424 P open tracheal system development
GO:0007425 P epithelial cell fate determination, open tracheal system
GO:0007427 P epithelial cell migration, open tracheal system
GO:0007440 P foregut morphogenesis
GO:0007442 P hindgut morphogenesis
GO:0007443 P Malpighian tubule morphogenesis
GO:0007444 P imaginal disc development
GO:0007446 P imaginal disc growth
GO:0007447 P imaginal disc pattern formation
GO:0007448 P anterior/posterior pattern specification, imaginal disc
GO:0007450 P dorsal/ventral pattern formation, imaginal disc
GO:0007455 P eye-antennal disc morphogenesis
GO:0007458 P progression of morphogenetic furrow involved in compound eye morphogenesis
GO:0007473 P wing disc proximal/distal pattern formation
GO:0007474 P imaginal disc-derived wing vein specification
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007479 P leg disc proximal/distal pattern formation
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0007516 P hemocyte development
GO:0008083 F growth factor activity
GO:0008201 F heparin binding
GO:0008285 P negative regulation of cell population proliferation
GO:0008354 P germ cell migration
GO:0008360 P regulation of cell shape
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0009948 P anterior/posterior axis specification
GO:0009950 P dorsal/ventral axis specification
GO:0010002 P cardioblast differentiation
GO:0010629 P negative regulation of gene expression
GO:0010862 P positive regulation of pathway-restricted SMAD protein phosphorylation
GO:0016015 F morphogen activity
GO:0017145 P stem cell division
GO:0019827 P stem cell population maintenance
GO:0030154 P cell differentiation
GO:0030509 P BMP signaling pathway
GO:0030707 P ovarian follicle cell development
GO:0030718 P germ-line stem cell population maintenance
GO:0030721 P spectrosome organization
GO:0035147 P branch fusion, open tracheal system
GO:0035156 P fusion cell fate specification
GO:0035158 P regulation of tube diameter, open tracheal system
GO:0035168 P larval lymph gland hemocyte differentiation
GO:0035214 P eye-antennal disc development
GO:0035215 P genital disc development
GO:0035217 P labial disc development
GO:0035222 P wing disc pattern formation
GO:0035224 P genital disc anterior/posterior pattern formation
GO:0035230 C cytoneme
GO:0035263 P genital disc sexually dimorphic development
GO:0035309 P wing and notum subfield formation
GO:0036099 P female germ-line stem cell population maintenance
GO:0040007 P growth
GO:0042078 P germ-line stem cell division
GO:0042127 P regulation of cell population proliferation
GO:0042803 F protein homodimerization activity
GO:0042981 P regulation of apoptotic process
GO:0043408 P regulation of MAPK cascade
GO:0045476 P nurse cell apoptotic process
GO:0045570 P regulation of imaginal disc growth
GO:0045595 P regulation of cell differentiation
GO:0045705 P negative regulation of salivary gland boundary specification
GO:0046620 P regulation of organ growth
GO:0046843 P dorsal appendage formation
GO:0046845 P branched duct epithelial cell fate determination, open tracheal system
GO:0046982 F protein heterodimerization activity
GO:0048066 P developmental pigmentation
GO:0048100 P wing disc anterior/posterior pattern formation
GO:0048477 P oogenesis
GO:0048542 P lymph gland development
GO:0048619 P embryonic hindgut morphogenesis
GO:0048636 P positive regulation of muscle organ development
GO:0060323 P head morphogenesis
GO:0060395 P SMAD protein signal transduction
GO:0061320 P pericardial nephrocyte differentiation
GO:0061327 P anterior Malpighian tubule development
GO:0061353 P BMP signaling pathway involved in Malpighian tubule cell chemotaxis
1996 O_BomoOtmSK11798_complete:A_BomoOtmSK_comp14065_c0_seq1
102bp
1997 O_BomoOtmSK11799_complete:A_BomoOtmSK_comp14065_c0_seq2
370bp
 decapentaplegic_isoform_X1_[Bombyx_mori]
GO:0001708 P cell fate specification
GO:0001709 P cell fate determination
GO:0001715 P ectodermal cell fate specification
GO:0001745 P compound eye morphogenesis
GO:0005125 F cytokine activity
GO:0005160 F transforming growth factor beta receptor binding
GO:0005515 F protein binding
GO:0005518 F collagen binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005622 C intracellular anatomical structure
GO:0005768 C endosome
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0007281 P germ cell development
GO:0007304 P chorion-containing eggshell formation
GO:0007313 P maternal specification of dorsal/ventral axis, oocyte, soma encoded
GO:0007352 P zygotic specification of dorsal/ventral axis
GO:0007354 P zygotic determination of anterior/posterior axis, embryo
GO:0007378 P amnioserosa formation
GO:0007391 P dorsal closure
GO:0007393 P dorsal closure, leading edge cell fate determination
GO:0007398 P ectoderm development
GO:0007423 P sensory organ development
GO:0007424 P open tracheal system development
GO:0007425 P epithelial cell fate determination, open tracheal system
GO:0007427 P epithelial cell migration, open tracheal system
GO:0007440 P foregut morphogenesis
GO:0007442 P hindgut morphogenesis
GO:0007443 P Malpighian tubule morphogenesis
GO:0007444 P imaginal disc development
GO:0007446 P imaginal disc growth
GO:0007447 P imaginal disc pattern formation
GO:0007448 P anterior/posterior pattern specification, imaginal disc
GO:0007450 P dorsal/ventral pattern formation, imaginal disc
GO:0007455 P eye-antennal disc morphogenesis
GO:0007458 P progression of morphogenetic furrow involved in compound eye morphogenesis
GO:0007473 P wing disc proximal/distal pattern formation
GO:0007474 P imaginal disc-derived wing vein specification
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007479 P leg disc proximal/distal pattern formation
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0007516 P hemocyte development
GO:0008083 F growth factor activity
GO:0008201 F heparin binding
GO:0008285 P negative regulation of cell population proliferation
GO:0008354 P germ cell migration
GO:0008360 P regulation of cell shape
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0009948 P anterior/posterior axis specification
GO:0009950 P dorsal/ventral axis specification
GO:0010002 P cardioblast differentiation
GO:0010629 P negative regulation of gene expression
GO:0010862 P positive regulation of pathway-restricted SMAD protein phosphorylation
GO:0016015 F morphogen activity
GO:0017145 P stem cell division
GO:0019827 P stem cell population maintenance
GO:0030154 P cell differentiation
GO:0030509 P BMP signaling pathway
GO:0030707 P ovarian follicle cell development
GO:0030718 P germ-line stem cell population maintenance
GO:0030721 P spectrosome organization
GO:0035147 P branch fusion, open tracheal system
GO:0035156 P fusion cell fate specification
GO:0035158 P regulation of tube diameter, open tracheal system
GO:0035168 P larval lymph gland hemocyte differentiation
GO:0035214 P eye-antennal disc development
GO:0035215 P genital disc development
GO:0035217 P labial disc development
GO:0035222 P wing disc pattern formation
GO:0035224 P genital disc anterior/posterior pattern formation
GO:0035230 C cytoneme
GO:0035263 P genital disc sexually dimorphic development
GO:0035309 P wing and notum subfield formation
GO:0036099 P female germ-line stem cell population maintenance
GO:0040007 P growth
GO:0042078 P germ-line stem cell division
GO:0042127 P regulation of cell population proliferation
GO:0042803 F protein homodimerization activity
GO:0042981 P regulation of apoptotic process
GO:0043408 P regulation of MAPK cascade
GO:0045476 P nurse cell apoptotic process
GO:0045570 P regulation of imaginal disc growth
GO:0045595 P regulation of cell differentiation
GO:0045705 P negative regulation of salivary gland boundary specification
GO:0046620 P regulation of organ growth
GO:0046843 P dorsal appendage formation
GO:0046845 P branched duct epithelial cell fate determination, open tracheal system
GO:0046982 F protein heterodimerization activity
GO:0048066 P developmental pigmentation
GO:0048100 P wing disc anterior/posterior pattern formation
GO:0048477 P oogenesis
GO:0048542 P lymph gland development
GO:0048619 P embryonic hindgut morphogenesis
GO:0048636 P positive regulation of muscle organ development
GO:0060323 P head morphogenesis
GO:0060395 P SMAD protein signal transduction
GO:0061320 P pericardial nephrocyte differentiation
GO:0061327 P anterior Malpighian tubule development
GO:0061353 P BMP signaling pathway involved in Malpighian tubule cell chemotaxis
1998 O_BomoOtmSK1179_internal:A_BomoOtmSK_comp4692_c0_seq1
487bp
 phosphatidylinositol_4-phosphate_3-kinase_C2_domain-containing_subunit_alpha_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005942 C phosphatidylinositol 3-kinase complex
GO:0006887 P exocytosis
GO:0006897 P endocytosis
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016303 F 1-phosphatidylinositol-3-kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0030136 C clathrin-coated vesicle
GO:0031410 C cytoplasmic vesicle
GO:0031982 C vesicle
GO:0035005 F 1-phosphatidylinositol-4-phosphate 3-kinase activity
GO:0035091 F phosphatidylinositol binding
GO:0036092 P phosphatidylinositol-3-phosphate biosynthetic process
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0048015 P phosphatidylinositol-mediated signaling
GO:0070062 C extracellular exosome
GO:0071583 P negative regulation of zinc ion transmembrane transport
1999 O_BomoOtmSK117_internal:A_BomoOtmSK_comp451_c0_seq1
221bp
 PREDICTED:_T-box_transcription_factor_TBX1-like_[Amyelois_transitella]
GO:0001525 P angiogenesis
GO:0001568 P blood vessel development
GO:0001708 P cell fate specification
GO:0001755 P neural crest cell migration
GO:0001934 P positive regulation of protein phosphorylation
GO:0001945 P lymph vessel development
GO:0002053 P positive regulation of mesenchymal cell proliferation
GO:0003007 P heart morphogenesis
GO:0003148 P outflow tract septum morphogenesis
GO:0003151 P outflow tract morphogenesis
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007368 P determination of left/right symmetry
GO:0007389 P pattern specification process
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0007517 P muscle organ development
GO:0007605 P sensory perception of sound
GO:0008283 P cell population proliferation
GO:0008284 P positive regulation of cell population proliferation
GO:0009952 P anterior/posterior pattern specification
GO:0021644 P vagus nerve morphogenesis
GO:0030855 P epithelial cell differentiation
GO:0030878 P thyroid gland development
GO:0035176 P social behavior
GO:0035909 P aorta morphogenesis
GO:0042471 P ear morphogenesis
GO:0042472 P inner ear morphogenesis
GO:0042473 P outer ear morphogenesis
GO:0042474 P middle ear morphogenesis
GO:0042475 P odontogenesis of dentin-containing tooth
GO:0042693 P muscle cell fate commitment
GO:0042803 F protein homodimerization activity
GO:0043410 P positive regulation of MAPK cascade
GO:0043565 F sequence-specific DNA binding
GO:0043587 P tongue morphogenesis
GO:0044344 P cellular response to fibroblast growth factor stimulus
GO:0045596 P negative regulation of cell differentiation
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046983 F protein dimerization activity
GO:0048384 P retinoic acid receptor signaling pathway
GO:0048514 P blood vessel morphogenesis
GO:0048538 P thymus development
GO:0048644 P muscle organ morphogenesis
GO:0048701 P embryonic cranial skeleton morphogenesis
GO:0048703 P embryonic viscerocranium morphogenesis
GO:0048752 P semicircular canal morphogenesis
GO:0048844 P artery morphogenesis
GO:0050679 P positive regulation of epithelial cell proliferation
GO:0060017 P parathyroid gland development
GO:0060023 P soft palate development
GO:0060037 P pharyngeal system development
GO:0060325 P face morphogenesis
GO:0060415 P muscle tissue morphogenesis
GO:0060982 P coronary artery morphogenesis
GO:0070166 P enamel mineralization
GO:0071300 P cellular response to retinoic acid
GO:0090103 P cochlea morphogenesis
GO:0097152 P mesenchymal cell apoptotic process
GO:2000027 P regulation of animal organ morphogenesis
GO:2001037 P positive regulation of tongue muscle cell differentiation
GO:2001054 P negative regulation of mesenchymal cell apoptotic process
2000 O_BomoOtmSK11800_complete:A_BomoOtmSK_comp14065_c0_seq2
116bp
2001 O_BomoOtmSK11801_complete:A_BomoOtmSK_comp14065_c0_seq2
111bp
2002 O_BomoOtmSK11802_complete:A_BomoOtmSK_comp14065_c0_seq2
102bp
2003 O_BomoOtmSK11803_5prime_partial:A_BomoOtmSK_comp14066_c1_seq4
125bp
2004 O_BomoOtmSK11804_3prime_partial:A_BomoOtmSK_comp14066_c1_seq4
110bp
2005 O_BomoOtmSK11805_complete:A_BomoOtmSK_comp14067_c0_seq1
622bp
 uncharacterized_protein_LOC101741728_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004556 F alpha-amylase activity
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0043169 F cation binding
GO:0046872 F metal ion binding
2006 O_BomoOtmSK11806_complete:A_BomoOtmSK_comp14067_c0_seq3
622bp
 uncharacterized_protein_LOC101741728_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004556 F alpha-amylase activity
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0043169 F cation binding
GO:0046872 F metal ion binding
2007 O_BomoOtmSK11807_complete:A_BomoOtmSK_comp14068_c0_seq2
144bp
 RNA_binding_motif_protein_18_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002230 P positive regulation of defense response to virus by host
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0098792 P xenophagy
2008 O_BomoOtmSK11808_complete:A_BomoOtmSK_comp14068_c0_seq3
194bp
 RNA_binding_motif_protein_18_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002230 P positive regulation of defense response to virus by host
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0098792 P xenophagy
2009 O_BomoOtmSK11809_complete:A_BomoOtmSK_comp14069_c0_seq1
760bp
 FYVE,_RhoGEF_and_PH_domain-containing_protein_3_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0035023 P regulation of Rho protein signal transduction
GO:0090630 P activation of GTPase activity
2010 O_BomoOtmSK1180_3prime_partial:A_BomoOtmSK_comp4703_c0_seq1
239bp
 peroxisome_assembly_protein_12_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005779 C integral component of peroxisomal membrane
GO:0006513 P protein monoubiquitination
GO:0006625 P protein targeting to peroxisome
GO:0007031 P peroxisome organization
GO:0008022 F protein C-terminus binding
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016558 P protein import into peroxisome matrix
GO:0046872 F metal ion binding
GO:1990429 C peroxisomal importomer complex
previous next from show/35878

- SilkBase 1999-2023 -