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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1921 O_BomoOtmSK1172_complete:A_BomoOtmSK_comp4683_c0_seq1
107bp
1922 O_BomoOtmSK11730_5prime_partial:A_BomoOtmSK_comp14027_c0_seq2
142bp
1923 O_BomoOtmSK11731_3prime_partial:A_BomoOtmSK_comp14027_c0_seq2
102bp
1924 O_BomoOtmSK11732_complete:A_BomoOtmSK_comp14028_c0_seq1
477bp
 PREDICTED:_T-cell_activation_inhibitor,_mitochondrial_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0008150 P biological_process
1925 O_BomoOtmSK11733_5prime_partial:A_BomoOtmSK_comp14028_c0_seq2
165bp
 T-cell_activation_inhibitor,_mitochondrial_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0008150 P biological_process
1926 O_BomoOtmSK11734_complete:A_BomoOtmSK_comp14028_c0_seq3
240bp
 T-cell_activation_inhibitor,_mitochondrial_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0008150 P biological_process
1927 O_BomoOtmSK11735_complete:A_BomoOtmSK_comp14028_c0_seq3
208bp
 PREDICTED:_T-cell_activation_inhibitor,_mitochondrial_[Amyelois_transitella]
GO:0005739 C mitochondrion
1928 O_BomoOtmSK11736_5prime_partial:A_BomoOtmSK_comp14029_c0_seq1
324bp
 uncharacterized_protein_LOC110379660_[Helicoverpa_armigera]
1929 O_BomoOtmSK11737_complete:A_BomoOtmSK_comp14030_c0_seq1
396bp
 pinin_[Bombyx_mori]
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0005198 F structural molecule activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005882 C intermediate filament
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0007155 P cell adhesion
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0016607 C nuclear speck
GO:0030054 C cell junction
GO:0030057 C desmosome
GO:0035145 C exon-exon junction complex
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
1930 O_BomoOtmSK11738_complete:A_BomoOtmSK_comp14030_c0_seq1
148bp
1931 O_BomoOtmSK11739_complete:A_BomoOtmSK_comp14031_c0_seq1
839bp
 host_cell_factor_1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000123 C histone acetyltransferase complex
GO:0001205 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007005 P mitochondrion organization
GO:0007049 P cell cycle
GO:0010628 P positive regulation of gene expression
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016568 P chromatin organization
GO:0019046 P release from viral latency
GO:0030424 C axon
GO:0030425 C dendrite
GO:0042802 F identical protein binding
GO:0043025 C neuronal cell body
GO:0043254 P regulation of protein-containing complex assembly
GO:0043981 P histone H4-K5 acetylation
GO:0043982 P histone H4-K8 acetylation
GO:0043984 P histone H4-K16 acetylation
GO:0043995 F histone acetyltransferase activity (H4-K5 specific)
GO:0043996 F histone acetyltransferase activity (H4-K8 specific)
GO:0045787 P positive regulation of cell cycle
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046972 F histone acetyltransferase activity (H4-K16 specific)
GO:0048188 C Set1C/COMPASS complex
GO:0050821 P protein stabilization
GO:0070461 C SAGA-type complex
GO:0070688 C obsolete MLL5-L complex
GO:0071339 C MLL1 complex
GO:0071407 P cellular response to organic cyclic compound
1932 O_BomoOtmSK1173_5prime_partial:A_BomoOtmSK_comp4686_c0_seq1
448bp
 uncharacterized_protein_LOC110374396_[Helicoverpa_armigera]
GO:0004806 F triglyceride lipase activity
GO:0005515 F protein binding
GO:0005811 C lipid droplet
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0008152 P metabolic process
GO:0010891 P negative regulation of sequestering of triglyceride
GO:0010898 P positive regulation of triglyceride catabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0019433 P triglyceride catabolic process
1933 O_BomoOtmSK11740_3prime_partial:A_BomoOtmSK_comp14032_c0_seq1
622bp
 integral_membrane_protein_GPR155_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005622 C intracellular anatomical structure
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035556 P intracellular signal transduction
GO:0050890 P cognition
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
1934 O_BomoOtmSK11741_complete:A_BomoOtmSK_comp14032_c0_seq1
166bp
1935 O_BomoOtmSK11742_complete:A_BomoOtmSK_comp14033_c0_seq1
373bp
 uncharacterized_protein_LOC101739846_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005840 C ribosome
GO:0006457 P protein folding
GO:0008270 F zinc ion binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
1936 O_BomoOtmSK11743_complete:A_BomoOtmSK_comp14033_c0_seq1
242bp
 uncharacterized_protein_LOC101739846_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
1937 O_BomoOtmSK11744_5prime_partial:A_BomoOtmSK_comp14033_c0_seq1
166bp
1938 O_BomoOtmSK11745_complete:A_BomoOtmSK_comp14033_c0_seq2
389bp
 uncharacterized_protein_LOC101739846_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
1939 O_BomoOtmSK11746_complete:A_BomoOtmSK_comp14033_c0_seq2
242bp
 uncharacterized_protein_LOC101739846_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
1940 O_BomoOtmSK11747_5prime_partial:A_BomoOtmSK_comp14033_c0_seq2
166bp
1941 O_BomoOtmSK11748_complete:A_BomoOtmSK_comp14033_c0_seq3
609bp
 uncharacterized_protein_LOC101739846_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005840 C ribosome
GO:0006457 P protein folding
GO:0008270 F zinc ion binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
1942 O_BomoOtmSK11749_5prime_partial:A_BomoOtmSK_comp14033_c0_seq3
166bp
1943 O_BomoOtmSK1174_3prime_partial:A_BomoOtmSK_comp4686_c0_seq1
127bp
1944 O_BomoOtmSK11750_complete:A_BomoOtmSK_comp14033_c0_seq4
625bp
 uncharacterized_protein_LOC101739846_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005840 C ribosome
GO:0006457 P protein folding
GO:0008270 F zinc ion binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
1945 O_BomoOtmSK11751_5prime_partial:A_BomoOtmSK_comp14033_c0_seq4
166bp
1946 O_BomoOtmSK11752_complete:A_BomoOtmSK_comp14038_c0_seq1
588bp
 rab-like_protein_6_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007264 P small GTPase mediated signal transduction
GO:0015031 P protein transport
1947 O_BomoOtmSK11753_3prime_partial:A_BomoOtmSK_comp14039_c0_seq1
207bp
 homeotic_protein_female_sterile_isoform_X4_[Bombyx_mori]
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006334 P nucleosome assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007283 P spermatogenesis
GO:0016568 P chromatin organization
GO:0070577 F lysine-acetylated histone binding
1948 O_BomoOtmSK11754_complete:A_BomoOtmSK_comp14041_c0_seq1
611bp
 scavenger_receptor_type_C_precursor_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0016020 C membrane
1949 O_BomoOtmSK11755_complete:A_BomoOtmSK_comp14041_c0_seq1
105bp
1950 O_BomoOtmSK11756_3prime_partial:A_BomoOtmSK_comp14042_c0_seq1
514bp
 DET1_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0008150 P biological_process
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