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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1081 O_BomoOtmSK10974_3prime_partial:A_BomoOtmSK_comp13712_c0_seq1
260bp
 transcription_factor_with_AP2_domain(s)_(AP2-G)_[Plasmodium_ovale_wallikeri]
1082 O_BomoOtmSK10975_5prime_partial:A_BomoOtmSK_comp13712_c0_seq1
135bp
1083 O_BomoOtmSK10976_3prime_partial:A_BomoOtmSK_comp13713_c0_seq1
638bp
 nipped-B-like_protein_A_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000785 C chromatin
GO:0003007 P heart morphogenesis
GO:0003151 P outflow tract morphogenesis
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0007420 P brain development
GO:0007507 P heart development
GO:0007605 P sensory perception of sound
GO:0008022 F protein C-terminus binding
GO:0010468 P regulation of gene expression
GO:0019827 P stem cell population maintenance
GO:0031065 P positive regulation of histone deacetylation
GO:0032116 C SMC loading complex
GO:0034088 P maintenance of mitotic sister chromatid cohesion
GO:0034613 P cellular protein localization
GO:0035115 P embryonic forelimb morphogenesis
GO:0035136 P forelimb morphogenesis
GO:0035261 P external genitalia morphogenesis
GO:0036033 F mediator complex binding
GO:0040018 P positive regulation of multicellular organism growth
GO:0042471 P ear morphogenesis
GO:0042634 P regulation of hair cycle
GO:0042826 F histone deacetylase binding
GO:0045444 P fat cell differentiation
GO:0045778 P positive regulation of ossification
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0045995 P regulation of embryonic development
GO:0047485 F protein N-terminus binding
GO:0048557 P embryonic digestive tract morphogenesis
GO:0048589 P developmental growth
GO:0048592 P eye morphogenesis
GO:0048638 P regulation of developmental growth
GO:0048701 P embryonic cranial skeleton morphogenesis
GO:0048703 P embryonic viscerocranium morphogenesis
GO:0050890 P cognition
GO:0060325 P face morphogenesis
GO:0061010 P gall bladder development
GO:0061038 P uterus morphogenesis
GO:0070062 C extracellular exosome
GO:0070087 F chromo shadow domain binding
GO:0071481 P cellular response to X-ray
1084 O_BomoOtmSK10977_complete:A_BomoOtmSK_comp13713_c0_seq1
111bp
1085 O_BomoOtmSK10978_complete:A_BomoOtmSK_comp13713_c0_seq1
109bp
1086 O_BomoOtmSK10979_3prime_partial:A_BomoOtmSK_comp13713_c0_seq2
638bp
 nipped-B-like_protein_A_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000785 C chromatin
GO:0003007 P heart morphogenesis
GO:0003151 P outflow tract morphogenesis
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0007420 P brain development
GO:0007507 P heart development
GO:0007605 P sensory perception of sound
GO:0008022 F protein C-terminus binding
GO:0010468 P regulation of gene expression
GO:0019827 P stem cell population maintenance
GO:0031065 P positive regulation of histone deacetylation
GO:0032116 C SMC loading complex
GO:0034088 P maintenance of mitotic sister chromatid cohesion
GO:0034613 P cellular protein localization
GO:0035115 P embryonic forelimb morphogenesis
GO:0035136 P forelimb morphogenesis
GO:0035261 P external genitalia morphogenesis
GO:0036033 F mediator complex binding
GO:0040018 P positive regulation of multicellular organism growth
GO:0042471 P ear morphogenesis
GO:0042634 P regulation of hair cycle
GO:0042826 F histone deacetylase binding
GO:0045444 P fat cell differentiation
GO:0045778 P positive regulation of ossification
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0045995 P regulation of embryonic development
GO:0047485 F protein N-terminus binding
GO:0048557 P embryonic digestive tract morphogenesis
GO:0048589 P developmental growth
GO:0048592 P eye morphogenesis
GO:0048638 P regulation of developmental growth
GO:0048701 P embryonic cranial skeleton morphogenesis
GO:0048703 P embryonic viscerocranium morphogenesis
GO:0050890 P cognition
GO:0060325 P face morphogenesis
GO:0061010 P gall bladder development
GO:0061038 P uterus morphogenesis
GO:0070062 C extracellular exosome
GO:0070087 F chromo shadow domain binding
GO:0071481 P cellular response to X-ray
1087 O_BomoOtmSK1097_3prime_partial:A_BomoOtmSK_comp4576_c0_seq1
738bp
 aminopeptidase_N-like_isoform_X1_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0001618 F virus receptor activity
GO:0004177 F aminopeptidase activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0042277 F peptide binding
GO:0043171 P peptide catabolic process
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0070006 F metalloaminopeptidase activity
1088 O_BomoOtmSK10980_complete:A_BomoOtmSK_comp13713_c0_seq2
140bp
1089 O_BomoOtmSK10981_complete:A_BomoOtmSK_comp13713_c0_seq2
109bp
1090 O_BomoOtmSK10982_3prime_partial:A_BomoOtmSK_comp13714_c0_seq1
750bp
 LOW_QUALITY_PROTEIN:_constitutive_coactivator_of_PPAR-gamma-like_protein_1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0016020 C membrane
1091 O_BomoOtmSK10983_3prime_partial:A_BomoOtmSK_comp13714_c0_seq2
750bp
 LOW_QUALITY_PROTEIN:_constitutive_coactivator_of_PPAR-gamma-like_protein_1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0016020 C membrane
1092 O_BomoOtmSK10984_5prime_partial:A_BomoOtmSK_comp13715_c0_seq1
124bp
 multidrug_resistance-associated_protein_7_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000329 C fungal-type vacuole membrane
GO:0005524 F ATP binding
GO:0005773 C vacuole
GO:0005774 C vacuolar membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0015086 F cadmium ion transmembrane transporter activity
GO:0015127 F bilirubin transmembrane transporter activity
GO:0015691 P cadmium ion transport
GO:0015723 P bilirubin transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042144 P vacuole fusion, non-autophagic
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:0070574 P cadmium ion transmembrane transport
1093 O_BomoOtmSK10985_5prime_partial:A_BomoOtmSK_comp13716_c0_seq1
186bp
 leucine-rich_repeat-containing_protein_AAC1_isoform_X1_[Bombyx_mori]
1094 O_BomoOtmSK10986_5prime_partial:A_BomoOtmSK_comp13716_c0_seq2
327bp
 leucine-rich_repeat-containing_protein_AAC1_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005689 C U12-type spliceosomal complex
GO:0006915 P apoptotic process
GO:0051384 P response to glucocorticoid
GO:0070234 P positive regulation of T cell apoptotic process
GO:2001235 P positive regulation of apoptotic signaling pathway
1095 O_BomoOtmSK10987_5prime_partial:A_BomoOtmSK_comp13716_c0_seq3
186bp
 leucine-rich_repeat-containing_protein_AAC1_isoform_X1_[Bombyx_mori]
1096 O_BomoOtmSK10988_complete:A_BomoOtmSK_comp13716_c0_seq3
109bp
 leucine-rich_repeat-containing_protein_AAC1_isoform_X1_[Bombyx_mori]
1097 O_BomoOtmSK10989_complete:A_BomoOtmSK_comp13718_c0_seq1
447bp
 L-2-hydroxyglutarate_dehydrogenase,_mitochondrial_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0016491 F oxidoreductase activity
GO:0047545 F 2-hydroxyglutarate dehydrogenase activity
GO:0055114 P obsolete oxidation-reduction process
1098 O_BomoOtmSK1098_5prime_partial:A_BomoOtmSK_comp4576_c0_seq1
234bp
1099 O_BomoOtmSK10990_complete:A_BomoOtmSK_comp13719_c0_seq1
260bp
 cytochrome_P450_4C1_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0010430 P fatty acid omega-oxidation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
1100 O_BomoOtmSK10991_complete:A_BomoOtmSK_comp13719_c0_seq1
202bp
 cytochrome_P450_4C1_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
1101 O_BomoOtmSK10992_complete:A_BomoOtmSK_comp13719_c0_seq2
488bp
 cytochrome_P450_4C1_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005575 C cellular_component
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0010430 P fatty acid omega-oxidation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
1102 O_BomoOtmSK10993_complete:A_BomoOtmSK_comp13719_c0_seq3
395bp
 cytochrome_P450_4C1_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070330 F aromatase activity
1103 O_BomoOtmSK10994_complete:A_BomoOtmSK_comp13719_c0_seq4
202bp
 cytochrome_P450_4C1_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
1104 O_BomoOtmSK10995_complete:A_BomoOtmSK_comp13719_c0_seq4
167bp
 cytochrome_P450_4C1_[Bombyx_mori]
GO:0004497 F monooxygenase activity
GO:0005506 F iron ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0009055 F electron transfer activity
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 F heme binding
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
1105 O_BomoOtmSK10996_complete:A_BomoOtmSK_comp13720_c0_seq1
1496bp
 DNA_polymerase_alpha_catalytic_subunit_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000731 P DNA synthesis involved in DNA repair
GO:0000785 C chromatin
GO:0001882 F nucleoside binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003896 F DNA primase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005654 C nucleoplasm
GO:0005658 C alpha DNA polymerase:primase complex
GO:0005730 C nucleolus
GO:0006260 P DNA replication
GO:0006269 P DNA replication, synthesis of RNA primer
GO:0006270 P DNA replication initiation
GO:0006271 P DNA strand elongation involved in DNA replication
GO:0006272 P leading strand elongation
GO:0006273 P lagging strand elongation
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0008283 P cell population proliferation
GO:0008408 F 3'-5' exonuclease activity
GO:0016363 C nuclear matrix
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
1106 O_BomoOtmSK10997_complete:A_BomoOtmSK_comp13721_c0_seq1
415bp
 tigger_transposable_element-derived_protein_6-like_protein,_partial_[Lasius_niger]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
1107 O_BomoOtmSK10998_complete:A_BomoOtmSK_comp13721_c0_seq1
168bp
 PREDICTED:_nucleolar_protein_58-like_[Bemisia_tabaci]
1108 O_BomoOtmSK10999_internal:A_BomoOtmSK_comp13724_c0_seq1
369bp
 probable_Rho_GTPase-activating_protein_CG5521_isoform_X1_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
1109 O_BomoOtmSK1099_complete:A_BomoOtmSK_comp4576_c0_seq1
129bp
1110 O_BomoOtmSK109_internal:A_BomoOtmSK_comp409_c0_seq2
222bp
 phosphofurin_acidic_cluster_sorting_protein_1_isoform_X4_[Bombyx_mori]
GO:0000042 P protein localization to Golgi apparatus
GO:0005515 F protein binding
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0016032 P viral process
GO:0030137 C COPI-coated vesicle
GO:0032092 P positive regulation of protein binding
GO:0034613 P cellular protein localization
GO:0044325 F transmembrane transporter binding
GO:0048471 C perinuclear region of cytoplasm
GO:0050690 P regulation of defense response to virus by virus
GO:0072661 P protein localization to plasma membrane
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