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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1051 O_BomoOtmSK10947_5prime_partial:A_BomoOtmSK_comp13699_c0_seq1
618bp
 translation_factor_GUF1_homolog,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0016020 C membrane
GO:0016787 F hydrolase activity
1052 O_BomoOtmSK10948_5prime_partial:A_BomoOtmSK_comp13699_c0_seq2
113bp
 translation_factor_GUF1_homolog,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0016020 C membrane
GO:0016787 F hydrolase activity
1053 O_BomoOtmSK10949_complete:A_BomoOtmSK_comp13700_c0_seq1
1308bp
 dual_oxidase-like_isoform_X2_[Bombyx_mori]
GO:0004601 F peroxidase activity
GO:0005509 F calcium ion binding
GO:0006979 P response to oxidative stress
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016174 F NAD(P)H oxidase H2O2-forming activity
GO:0016491 F oxidoreductase activity
GO:0019221 P cytokine-mediated signaling pathway
GO:0020037 F heme binding
GO:0042335 P cuticle development
GO:0042744 P hydrogen peroxide catabolic process
GO:0046872 F metal ion binding
GO:0051591 P response to cAMP
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
1054 O_BomoOtmSK1094_complete:A_BomoOtmSK_comp4571_c0_seq1
175bp
1055 O_BomoOtmSK10950_complete:A_BomoOtmSK_comp13700_c0_seq1
225bp
 dual_oxidase-like_precursor_[Bombyx_mori]
GO:0004601 F peroxidase activity
GO:0005509 F calcium ion binding
GO:0006979 P response to oxidative stress
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016174 F NAD(P)H oxidase H2O2-forming activity
GO:0016491 F oxidoreductase activity
GO:0019221 P cytokine-mediated signaling pathway
GO:0020037 F heme binding
GO:0042335 P cuticle development
GO:0042744 P hydrogen peroxide catabolic process
GO:0046872 F metal ion binding
GO:0051591 P response to cAMP
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
1056 O_BomoOtmSK10951_complete:A_BomoOtmSK_comp13700_c0_seq2
1271bp
 dual_oxidase-like_isoform_X2_[Bombyx_mori]
GO:0004601 F peroxidase activity
GO:0005509 F calcium ion binding
GO:0006979 P response to oxidative stress
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016174 F NAD(P)H oxidase H2O2-forming activity
GO:0016491 F oxidoreductase activity
GO:0019221 P cytokine-mediated signaling pathway
GO:0020037 F heme binding
GO:0042335 P cuticle development
GO:0042744 P hydrogen peroxide catabolic process
GO:0046872 F metal ion binding
GO:0051591 P response to cAMP
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
1057 O_BomoOtmSK10952_complete:A_BomoOtmSK_comp13700_c0_seq2
225bp
 dual_oxidase-like_precursor_[Bombyx_mori]
GO:0004601 F peroxidase activity
GO:0005509 F calcium ion binding
GO:0006979 P response to oxidative stress
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016174 F NAD(P)H oxidase H2O2-forming activity
GO:0016491 F oxidoreductase activity
GO:0019221 P cytokine-mediated signaling pathway
GO:0020037 F heme binding
GO:0042335 P cuticle development
GO:0042744 P hydrogen peroxide catabolic process
GO:0046872 F metal ion binding
GO:0051591 P response to cAMP
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
1058 O_BomoOtmSK10953_3prime_partial:A_BomoOtmSK_comp13701_c0_seq1
469bp
 DNA_ligase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
1059 O_BomoOtmSK10954_complete:A_BomoOtmSK_comp13701_c0_seq2
406bp
 DNA_ligase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
1060 O_BomoOtmSK10955_3prime_partial:A_BomoOtmSK_comp13701_c0_seq3
469bp
 DNA_ligase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
1061 O_BomoOtmSK10956_complete:A_BomoOtmSK_comp13701_c0_seq3
312bp
 uncharacterized_protein_LOC101735450_isoform_X1_[Bombyx_mori]
1062 O_BomoOtmSK10957_complete:A_BomoOtmSK_comp13701_c0_seq4
406bp
 DNA_ligase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003909 F DNA ligase activity
GO:0003910 F DNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051103 P DNA ligation involved in DNA repair
GO:0051301 P cell division
GO:0071897 P DNA biosynthetic process
1063 O_BomoOtmSK10958_complete:A_BomoOtmSK_comp13701_c0_seq4
312bp
 uncharacterized_protein_LOC101735450_isoform_X1_[Bombyx_mori]
1064 O_BomoOtmSK10959_internal:A_BomoOtmSK_comp13703_c0_seq1
154bp
 protein_fem-1_homolog_CG6966_isoform_X3_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005575 C cellular_component
GO:0016567 P protein ubiquitination
GO:0051438 P regulation of ubiquitin-protein transferase activity
1065 O_BomoOtmSK1095_complete:A_BomoOtmSK_comp4571_c0_seq2
175bp
1066 O_BomoOtmSK10960_complete:A_BomoOtmSK_comp13704_c0_seq1
392bp
 PREDICTED:_serum_response_factor_homolog_isoform_X2_[Amyelois_transitella]
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0002168 P instar larval development
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007424 P open tracheal system development
GO:0007430 P terminal branching, open tracheal system
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007614 P short-term memory
GO:0008586 P imaginal disc-derived wing vein morphogenesis
GO:0030154 P cell differentiation
GO:0030431 P sleep
GO:0033613 F DNA-binding transcription factor binding
GO:0035154 P terminal cell fate specification, open tracheal system
GO:0035209 P pupal development
GO:0035220 P wing disc development
GO:0045165 P cell fate commitment
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046983 F protein dimerization activity
1067 O_BomoOtmSK10961_5prime_partial:A_BomoOtmSK_comp13704_c0_seq1
117bp
1068 O_BomoOtmSK10962_3prime_partial:A_BomoOtmSK_comp13705_c0_seq1
544bp
 cyclic_AMP-dependent_transcription_factor_ATF-6_beta_isoform_X2_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0031625 F ubiquitin protein ligase binding
GO:0035497 F cAMP response element binding
GO:0042802 F identical protein binding
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:1990440 P positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
1069 O_BomoOtmSK10963_5prime_partial:A_BomoOtmSK_comp13705_c0_seq2
220bp
 cyclic_AMP-dependent_transcription_factor_ATF-6_beta_isoform_X1_[Bombyx_mori]
GO:0000976 F transcription cis-regulatory region binding
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001654 P eye development
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006986 P response to unfolded protein
GO:0007601 P visual perception
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0031625 F ubiquitin protein ligase binding
GO:0035497 F cAMP response element binding
GO:0042802 F identical protein binding
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:1990440 P positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
1070 O_BomoOtmSK10964_5prime_partial:A_BomoOtmSK_comp13705_c0_seq3
220bp
 cyclic_AMP-dependent_transcription_factor_ATF-6_beta_isoform_X2_[Bombyx_mori]
GO:0000976 F transcription cis-regulatory region binding
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001654 P eye development
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006986 P response to unfolded protein
GO:0007601 P visual perception
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0031625 F ubiquitin protein ligase binding
GO:0035497 F cAMP response element binding
GO:0042802 F identical protein binding
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:1990440 P positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
1071 O_BomoOtmSK10965_3prime_partial:A_BomoOtmSK_comp13705_c0_seq4
545bp
 cyclic_AMP-dependent_transcription_factor_ATF-6_beta_isoform_X2_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0031625 F ubiquitin protein ligase binding
GO:0035497 F cAMP response element binding
GO:0042802 F identical protein binding
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:1990440 P positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
1072 O_BomoOtmSK10966_3prime_partial:A_BomoOtmSK_comp13707_c0_seq1
372bp
 PDZ_and_LIM_domain_protein_Zasp_[Bombyx_mori]
1073 O_BomoOtmSK10967_complete:A_BomoOtmSK_comp13709_c0_seq1
145bp
 39S_ribosomal_protein_L16,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
1074 O_BomoOtmSK10968_complete:A_BomoOtmSK_comp13709_c0_seq2
242bp
 39S_ribosomal_protein_L16,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0019843 F rRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
1075 O_BomoOtmSK10969_5prime_partial:A_BomoOtmSK_comp13710_c1_seq1
319bp
 serine/arginine_repetitive_matrix_protein_1_isoform_X4_[Bombyx_mori]
1076 O_BomoOtmSK1096_complete:A_BomoOtmSK_comp4571_c0_seq2
168bp
 nose_resistant_to_fluoxetine_protein_6_[Bombyx_mori]
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007275 P multicellular organism development
GO:0008152 P metabolic process
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
1077 O_BomoOtmSK10970_3prime_partial:A_BomoOtmSK_comp13710_c1_seq1
111bp
1078 O_BomoOtmSK10971_internal:A_BomoOtmSK_comp13711_c0_seq1
524bp
 phenylalanyl-tRNA_synthetase_beta_subunit_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004826 F phenylalanine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006432 P phenylalanyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0009328 C phenylalanine-tRNA ligase complex
GO:0016874 F ligase activity
1079 O_BomoOtmSK10972_5prime_partial:A_BomoOtmSK_comp13711_c0_seq2
449bp
 phenylalanyl-tRNA_synthetase_beta_subunit_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004826 F phenylalanine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006432 P phenylalanyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0009328 C phenylalanine-tRNA ligase complex
GO:0016874 F ligase activity
1080 O_BomoOtmSK10973_5prime_partial:A_BomoOtmSK_comp13712_c0_seq1
361bp
 protein_IWS1_homolog_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0010793 P regulation of mRNA export from nucleus
GO:0050684 P regulation of mRNA processing
GO:0051028 P mRNA transport
GO:0090239 P regulation of histone H4 acetylation
GO:2001253 P regulation of histone H3-K36 trimethylation
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