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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1111 O_BomoOtmSK10_internal:A_BomoOtmSK_comp32_c0_seq1
105bp
 putative_leucine-rich_repeat-containing_protein_DDB_G0290503_[Bombyx_mori]
1112 O_BomoOtmSK11000_internal:A_BomoOtmSK_comp13724_c0_seq2
215bp
 probable_Rho_GTPase-activating_protein_CG5521_isoform_X2_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
1113 O_BomoOtmSK11001_internal:A_BomoOtmSK_comp13724_c0_seq3
363bp
 probable_Rho_GTPase-activating_protein_CG5521_isoform_X2_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
1114 O_BomoOtmSK11002_5prime_partial:A_BomoOtmSK_comp13726_c0_seq1
387bp
 methionine_aminopeptidase_1_isoform_X1_[Bombyx_mori]
GO:0004177 F aminopeptidase activity
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008235 F metalloexopeptidase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
1115 O_BomoOtmSK11003_complete:A_BomoOtmSK_comp13727_c0_seq1
269bp
 zinc_finger_CCCH-type_with_G_patch_domain-containing_protein_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
1116 O_BomoOtmSK11004_complete:A_BomoOtmSK_comp13727_c0_seq2
540bp
 zinc_finger_CCCH-type_with_G_patch_domain-containing_protein_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
1117 O_BomoOtmSK11005_complete:A_BomoOtmSK_comp13729_c0_seq1
395bp
 mRNA_cap_guanine-N7_methyltransferase_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0004482 F mRNA (guanine-N7-)-methyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005845 C mRNA cap binding complex
GO:0006366 P transcription by RNA polymerase II
GO:0006370 P 7-methylguanosine mRNA capping
GO:0006397 P mRNA processing
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0036265 P RNA (guanine-N7)-methylation
GO:0043235 C receptor complex
1118 O_BomoOtmSK11006_complete:A_BomoOtmSK_comp13729_c0_seq2
364bp
 mRNA_cap_guanine-N7_methyltransferase_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0004482 F mRNA (guanine-N7-)-methyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005845 C mRNA cap binding complex
GO:0006366 P transcription by RNA polymerase II
GO:0006370 P 7-methylguanosine mRNA capping
GO:0006397 P mRNA processing
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0036265 P RNA (guanine-N7)-methylation
GO:0043235 C receptor complex
1119 O_BomoOtmSK11007_complete:A_BomoOtmSK_comp13733_c0_seq1
840bp
 3-hydroxy-3-methylglutaryl-CoA_reductase_precursor_[Bombyx_mori]
GO:0004420 F hydroxymethylglutaryl-CoA reductase (NADPH) activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008299 P isoprenoid biosynthetic process
GO:0015936 P coenzyme A metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0050661 F NADP binding
GO:0050662 F obsolete coenzyme binding
GO:0055114 P obsolete oxidation-reduction process
1120 O_BomoOtmSK11008_complete:A_BomoOtmSK_comp13734_c0_seq1
526bp
 leucine-rich_repeat-containing_protein_47_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0004826 F phenylalanine-tRNA ligase activity
GO:0005575 C cellular_component
GO:0006432 P phenylalanyl-tRNA aminoacylation
GO:0008150 P biological_process
GO:0009328 C phenylalanine-tRNA ligase complex
GO:0044822 F RNA binding
1121 O_BomoOtmSK11009_complete:A_BomoOtmSK_comp13735_c0_seq1
249bp
 28S_ribosomal_protein_S2,_mitochondrial_[Bombyx_mori]
GO:0002230 P positive regulation of defense response to virus by host
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
1122 O_BomoOtmSK1100_3prime_partial:A_BomoOtmSK_comp4576_c0_seq2
697bp
 aminopeptidase_N-like_isoform_X2_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0001618 F virus receptor activity
GO:0004177 F aminopeptidase activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0042277 F peptide binding
GO:0043171 P peptide catabolic process
GO:0046718 P viral entry into host cell
GO:0046872 F metal ion binding
GO:0070006 F metalloaminopeptidase activity
1123 O_BomoOtmSK11010_complete:A_BomoOtmSK_comp13735_c0_seq1
238bp
 leucine-rich_repeat-containing_protein_58_[Bombyx_mori]
1124 O_BomoOtmSK11011_complete:A_BomoOtmSK_comp13735_c0_seq1
107bp
 leucine-rich_repeat-containing_protein_58_[Bombyx_mori]
1125 O_BomoOtmSK11012_complete:A_BomoOtmSK_comp13735_c0_seq2
238bp
 leucine-rich_repeat-containing_protein_58_[Bombyx_mori]
1126 O_BomoOtmSK11013_complete:A_BomoOtmSK_comp13735_c0_seq3
358bp
 leucine-rich_repeat-containing_protein_58_[Bombyx_mori]
1127 O_BomoOtmSK11014_complete:A_BomoOtmSK_comp13735_c0_seq3
249bp
 28S_ribosomal_protein_S2,_mitochondrial_[Bombyx_mori]
GO:0002230 P positive regulation of defense response to virus by host
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
1128 O_BomoOtmSK11015_complete:A_BomoOtmSK_comp13735_c0_seq4
249bp
 28S_ribosomal_protein_S2,_mitochondrial_[Bombyx_mori]
GO:0002230 P positive regulation of defense response to virus by host
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
1129 O_BomoOtmSK11016_complete:A_BomoOtmSK_comp13735_c0_seq5
308bp
 leucine-rich_repeat-containing_protein_58_[Bombyx_mori]
1130 O_BomoOtmSK11017_internal:A_BomoOtmSK_comp13736_c0_seq1
122bp
 ras_GTPase-activating_protein_1_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0000281 P mitotic cytokinesis
GO:0001570 P vasculogenesis
GO:0001726 C ruffle
GO:0001948 F protein binding
GO:0001953 P negative regulation of cell-matrix adhesion
GO:0005096 F GTPase activator activity
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0007162 P negative regulation of cell adhesion
GO:0007165 P signal transduction
GO:0008360 P regulation of cell shape
GO:0009790 P embryo development
GO:0019870 F potassium channel inhibitor activity
GO:0030833 P regulation of actin filament polymerization
GO:0031235 C intrinsic component of the cytoplasmic side of the plasma membrane
GO:0035556 P intracellular signal transduction
GO:0043087 P regulation of GTPase activity
GO:0043524 P negative regulation of neuron apoptotic process
GO:0043547 P positive regulation of GTPase activity
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0048013 P ephrin receptor signaling pathway
GO:0048514 P blood vessel morphogenesis
GO:0051020 F GTPase binding
GO:0051252 P regulation of RNA metabolic process
1131 O_BomoOtmSK11018_5prime_partial:A_BomoOtmSK_comp13741_c0_seq1
260bp
 DNA_polymerase_delta_subunit_3_[Bombyx_mori]
1132 O_BomoOtmSK11019_complete:A_BomoOtmSK_comp13742_c0_seq1
391bp
 PREDICTED:_knirps-related_protein-like_[Papilio_machaon]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004879 F nuclear receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007417 P central nervous system development
GO:0008270 F zinc ion binding
GO:0030154 P cell differentiation
GO:0030522 P intracellular receptor signaling pathway
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
1133 O_BomoOtmSK1101_5prime_partial:A_BomoOtmSK_comp4576_c0_seq2
234bp
1134 O_BomoOtmSK11020_complete:A_BomoOtmSK_comp13742_c0_seq1
103bp
1135 O_BomoOtmSK11021_complete:A_BomoOtmSK_comp13742_c0_seq2
327bp
 protein_embryonic_gonad_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004879 F nuclear receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007417 P central nervous system development
GO:0008270 F zinc ion binding
GO:0030154 P cell differentiation
GO:0030522 P intracellular receptor signaling pathway
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
1136 O_BomoOtmSK11022_complete:A_BomoOtmSK_comp13743_c0_seq1
524bp
 uncharacterized_protein_LOC105842077_[Bombyx_mori]
GO:0005829 C cytosol
1137 O_BomoOtmSK11023_complete:A_BomoOtmSK_comp13743_c0_seq1
207bp
 alpha_N-terminal_protein_methyltransferase_1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006480 P N-terminal protein amino acid methylation
GO:0008168 F methyltransferase activity
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018016 P N-terminal peptidyl-proline dimethylation
GO:0032259 P methylation
GO:0035568 P N-terminal peptidyl-proline methylation
GO:0042054 F histone methyltransferase activity
GO:0071885 F N-terminal protein N-methyltransferase activity
1138 O_BomoOtmSK11024_complete:A_BomoOtmSK_comp13743_c0_seq2
524bp
 uncharacterized_protein_LOC105842077_[Bombyx_mori]
GO:0005829 C cytosol
1139 O_BomoOtmSK11025_complete:A_BomoOtmSK_comp13743_c0_seq2
207bp
 alpha_N-terminal_protein_methyltransferase_1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006480 P N-terminal protein amino acid methylation
GO:0008168 F methyltransferase activity
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018016 P N-terminal peptidyl-proline dimethylation
GO:0032259 P methylation
GO:0035568 P N-terminal peptidyl-proline methylation
GO:0042054 F histone methyltransferase activity
GO:0071885 F N-terminal protein N-methyltransferase activity
1140 O_BomoOtmSK11026_complete:A_BomoOtmSK_comp13743_c0_seq3
524bp
 uncharacterized_protein_LOC105842077_[Bombyx_mori]
GO:0005829 C cytosol
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