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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9961 O_BomoMSG18967_complete:A_BomoMSG_c26303_g1_i1
231bp
 uncharacterized_protein_LOC101737690_[Bombyx_mori]
9962 O_BomoMSG18968_complete:A_BomoMSG_c26303_g1_i1
121bp
9963 O_BomoMSG18969_5prime_partial:A_BomoMSG_c26304_g1_i1
765bp
 vacuolar_protein_sorting-associated_protein_41_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005794 C Golgi apparatus
GO:0005798 C Golgi-associated vesicle
GO:0005829 C cytosol
GO:0006623 P protein targeting to vacuole
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0008017 F microtubule binding
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0008333 P endosome to lysosome transport
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030123 C AP-3 adaptor complex
GO:0030136 C clathrin-coated vesicle
GO:0030897 C HOPS complex
GO:0031410 C cytoplasmic vesicle
GO:0031902 C late endosome membrane
GO:0033263 C CORVET complex
GO:0034058 P endosomal vesicle fusion
GO:0035542 P regulation of SNARE complex assembly
GO:0042144 P vacuole fusion, non-autophagic
GO:0042802 F identical protein binding
GO:0043621 F protein self-association
GO:0045055 P regulated exocytosis
GO:0046872 F metal ion binding
GO:0048193 P Golgi vesicle transport
GO:0051020 F GTPase binding
GO:0071439 C clathrin complex
GO:1902774 P late endosome to lysosome transport
9964 O_BomoMSG1896_complete:A_BomoMSG_c9340_g1_i1
104bp
9965 O_BomoMSG18970_complete:A_BomoMSG_c26304_g1_i1
100bp
9966 O_BomoMSG18971_5prime_partial:A_BomoMSG_c26304_g1_i5
118bp
 vacuolar_protein_sorting-associated_protein_41_homolog_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005794 C Golgi apparatus
GO:0005798 C Golgi-associated vesicle
GO:0005829 C cytosol
GO:0006623 P protein targeting to vacuole
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0008017 F microtubule binding
GO:0008270 F zinc ion binding
GO:0008333 P endosome to lysosome transport
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030123 C AP-3 adaptor complex
GO:0030136 C clathrin-coated vesicle
GO:0030897 C HOPS complex
GO:0031410 C cytoplasmic vesicle
GO:0031902 C late endosome membrane
GO:0033263 C CORVET complex
GO:0034058 P endosomal vesicle fusion
GO:0035542 P regulation of SNARE complex assembly
GO:0042144 P vacuole fusion, non-autophagic
GO:0042802 F identical protein binding
GO:0043621 F protein self-association
GO:0045055 P regulated exocytosis
GO:0046872 F metal ion binding
GO:0048193 P Golgi vesicle transport
GO:0051020 F GTPase binding
GO:0071439 C clathrin complex
GO:1902774 P late endosome to lysosome transport
9967 O_BomoMSG18972_complete:A_BomoMSG_c26305_g1_i1
247bp
 phosphatidylinositol-glycan_biosynthesis_class_X_protein_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
9968 O_BomoMSG18973_complete:A_BomoMSG_c26305_g1_i2
251bp
 phosphatidylinositol-glycan_biosynthesis_class_X_protein_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006506 P GPI anchor biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
9969 O_BomoMSG18974_complete:A_BomoMSG_c26306_g1_i1
208bp
 ras-related_protein_Rab7_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000331 C contractile vacuole
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005773 C vacuole
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0006886 P intracellular protein transport
GO:0006895 P Golgi to endosome transport
GO:0006913 P nucleocytoplasmic transport
GO:0006970 P response to osmotic stress
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031164 C contractile vacuolar membrane
GO:0032456 P endocytic recycling
GO:0033298 P contractile vacuole organization
GO:0042742 P defense response to bacterium
GO:0044351 P macropinocytosis
GO:0045335 C phagocytic vesicle
GO:0048548 P regulation of pinocytosis
GO:0055037 C recycling endosome
GO:0090382 P phagosome maturation
GO:0090387 P phagolysosome assembly involved in apoptotic cell clearance
9970 O_BomoMSG18975_complete:A_BomoMSG_c26306_g1_i2
208bp
 ras-related_protein_Rab7_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000331 C contractile vacuole
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005773 C vacuole
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0006886 P intracellular protein transport
GO:0006895 P Golgi to endosome transport
GO:0006913 P nucleocytoplasmic transport
GO:0006970 P response to osmotic stress
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031164 C contractile vacuolar membrane
GO:0032456 P endocytic recycling
GO:0033298 P contractile vacuole organization
GO:0042742 P defense response to bacterium
GO:0044351 P macropinocytosis
GO:0045335 C phagocytic vesicle
GO:0048548 P regulation of pinocytosis
GO:0055037 C recycling endosome
GO:0090382 P phagosome maturation
GO:0090387 P phagolysosome assembly involved in apoptotic cell clearance
9971 O_BomoMSG18976_5prime_partial:A_BomoMSG_c26307_g2_i1
133bp
 GPN-loop_GTPase_1-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
9972 O_BomoMSG18977_complete:A_BomoMSG_c26307_g2_i2
314bp
 GPN-loop_GTPase_1-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
9973 O_BomoMSG18978_complete:A_BomoMSG_c26308_g1_i1
1008bp
 PREDICTED:_MTSS1-like_protein_[Amyelois_transitella]
GO:0001726 C ruffle
GO:0002230 P positive regulation of defense response to virus by host
GO:0003779 F actin binding
GO:0003785 F actin monomer binding
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006928 P movement of cell or subcellular component
GO:0007009 P plasma membrane organization
GO:0007155 P cell adhesion
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0015629 C actin cytoskeleton
GO:0030035 P microspike assembly
GO:0030036 P actin cytoskeleton organization
GO:0030139 C endocytic vesicle
GO:0042802 F identical protein binding
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0061333 P renal tubule morphogenesis
GO:0071498 P cellular response to fluid shear stress
GO:0072102 P glomerulus morphogenesis
GO:0072160 P nephron tubule epithelial cell differentiation
GO:0098792 P xenophagy
GO:2001013 P epithelial cell proliferation involved in renal tubule morphogenesis
9974 O_BomoMSG18979_5prime_partial:A_BomoMSG_c26308_g1_i2
1011bp
 PREDICTED:_MTSS1-like_protein_[Amyelois_transitella]
GO:0001726 C ruffle
GO:0002230 P positive regulation of defense response to virus by host
GO:0003779 F actin binding
GO:0003785 F actin monomer binding
GO:0005102 F signaling receptor binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0006928 P movement of cell or subcellular component
GO:0007009 P plasma membrane organization
GO:0007155 P cell adhesion
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0015629 C actin cytoskeleton
GO:0030035 P microspike assembly
GO:0030036 P actin cytoskeleton organization
GO:0030139 C endocytic vesicle
GO:0042802 F identical protein binding
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0061333 P renal tubule morphogenesis
GO:0071498 P cellular response to fluid shear stress
GO:0072102 P glomerulus morphogenesis
GO:0072160 P nephron tubule epithelial cell differentiation
GO:0098792 P xenophagy
GO:2001013 P epithelial cell proliferation involved in renal tubule morphogenesis
9975 O_BomoMSG1897_internal:A_BomoMSG_c9349_g1_i1
113bp
9976 O_BomoMSG18980_5prime_partial:A_BomoMSG_c26308_g1_i3
660bp
 uncharacterized_protein_LOC101736700_[Bombyx_mori]
9977 O_BomoMSG18981_5prime_partial:A_BomoMSG_c26309_g1_i1
156bp
 piggyBac_transposable_element-derived_protein_4-like_isoform_X3_[Bombyx_mori]
9978 O_BomoMSG18982_5prime_partial:A_BomoMSG_c26309_g1_i2
552bp
 piggyBac_transposable_element-derived_protein_4-like_isoform_X1_[Bombyx_mori]
9979 O_BomoMSG18983_3prime_partial:A_BomoMSG_c26311_g1_i1
338bp
 uncharacterized_protein_LOC101745112_[Bombyx_mori]
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005798 C Golgi-associated vesicle
GO:0005802 C trans-Golgi network
GO:0006897 P endocytosis
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030136 C clathrin-coated vesicle
GO:0030276 F clathrin binding
GO:0031410 C cytoplasmic vesicle
GO:0043231 C intracellular membrane-bounded organelle
GO:0048471 C perinuclear region of cytoplasm
9980 O_BomoMSG18984_5prime_partial:A_BomoMSG_c26311_g1_i1
128bp
9981 O_BomoMSG18985_complete:A_BomoMSG_c26312_g1_i2
192bp
 AP-3_complex_subunit_sigma-2_isoform_X1_[Bombyx_mori]
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008089 P anterograde axonal transport
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030123 C AP-3 adaptor complex
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0043231 C intracellular membrane-bounded organelle
GO:0048490 P anterograde synaptic vesicle transport
GO:1904115 C axon cytoplasm
9982 O_BomoMSG18986_complete:A_BomoMSG_c26312_g1_i3
166bp
 AP-3_complex_subunit_sigma-2_isoform_X2_[Bombyx_mori]
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008089 P anterograde axonal transport
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030123 C AP-3 adaptor complex
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0043231 C intracellular membrane-bounded organelle
GO:0048490 P anterograde synaptic vesicle transport
GO:1904115 C axon cytoplasm
9983 O_BomoMSG18987_internal:A_BomoMSG_c26313_g1_i1
205bp
 uncharacterized_protein_LOC101746443_[Bombyx_mori]
9984 O_BomoMSG18988_internal:A_BomoMSG_c26313_g1_i2
181bp
 uncharacterized_protein_LOC101746443_[Bombyx_mori]
9985 O_BomoMSG18989_3prime_partial:A_BomoMSG_c26313_g1_i3
903bp
 uncharacterized_protein_LOC101746443_[Bombyx_mori]
9986 O_BomoMSG1898_internal:A_BomoMSG_c9349_g1_i1
113bp
 uncharacterized_protein_LOC101746184_[Bombyx_mori]
9987 O_BomoMSG18990_complete:A_BomoMSG_c26313_g1_i3
120bp
9988 O_BomoMSG18991_internal:A_BomoMSG_c26313_g1_i4
410bp
 uncharacterized_protein_LOC101746443_[Bombyx_mori]
9989 O_BomoMSG18992_3prime_partial:A_BomoMSG_c26313_g1_i4
104bp
9990 O_BomoMSG18993_complete:A_BomoMSG_c26315_g1_i1
122bp
 putative_phospholipase_B-like_2_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0006629 P lipid metabolic process
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
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