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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9871 O_BomoMSG18886_3prime_partial:A_BomoMSG_c26271_g1_i4
278bp
 retinol-binding_protein_pinta_isoform_X1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005622 C intracellular anatomical structure
GO:0006810 P transport
GO:0016020 C membrane
9872 O_BomoMSG18887_complete:A_BomoMSG_c26271_g1_i4
145bp
9873 O_BomoMSG18888_3prime_partial:A_BomoMSG_c26272_g1_i2
187bp
 dehydrodolichyl_diphosphate_synthase_complex_subunit_Nus1_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0003674 F molecular_function
GO:0004659 F prenyltransferase activity
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006489 P dolichyl diphosphate biosynthetic process
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016765 F transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0019408 P dolichol biosynthetic process
GO:0030154 P cell differentiation
GO:0032383 P regulation of intracellular cholesterol transport
GO:0035268 P protein mannosylation
GO:0042632 P cholesterol homeostasis
GO:0055092 P sterol homeostasis
9874 O_BomoMSG18889_5prime_partial:A_BomoMSG_c26273_g1_i1
160bp
 cysteine_protease_ATG4D_isoform_X1_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000422 P autophagy of mitochondrion
GO:0004197 F cysteine-type endopeptidase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0006501 P C-terminal protein lipidation
GO:0006508 P proteolysis
GO:0006612 P protein targeting to membrane
GO:0006810 P transport
GO:0006914 P autophagy
GO:0006915 P apoptotic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0015031 P protein transport
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0044804 P autophagy of nucleus
GO:0051697 P protein delipidation
9875 O_BomoMSG1888_3prime_partial:A_BomoMSG_c9298_g1_i1
107bp
9876 O_BomoMSG18890_3prime_partial:A_BomoMSG_c26273_g1_i3
311bp
 cysteine_protease_ATG4D_isoform_X1_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000422 P autophagy of mitochondrion
GO:0004197 F cysteine-type endopeptidase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0006501 P C-terminal protein lipidation
GO:0006508 P proteolysis
GO:0006612 P protein targeting to membrane
GO:0006810 P transport
GO:0006914 P autophagy
GO:0006915 P apoptotic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0015031 P protein transport
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0044804 P autophagy of nucleus
GO:0051697 P protein delipidation
9877 O_BomoMSG18891_internal:A_BomoMSG_c26274_g1_i1
238bp
 long-chain_fatty_acid_transport_protein_4_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0012505 C endomembrane system
GO:0015245 F fatty acid transmembrane transporter activity
GO:0015908 P fatty acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:0031957 F very long-chain fatty acid-CoA ligase activity
9878 O_BomoMSG18892_5prime_partial:A_BomoMSG_c26274_g2_i1
295bp
 long-chain_fatty_acid_transport_protein_1_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001579 P medium-chain fatty acid transport
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0005901 C caveola
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006646 P phosphatidylethanolamine biosynthetic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0006655 P phosphatidylglycerol biosynthetic process
GO:0006656 P phosphatidylcholine biosynthetic process
GO:0006659 P phosphatidylserine biosynthetic process
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0009409 P response to cold
GO:0012505 C endomembrane system
GO:0015245 F fatty acid transmembrane transporter activity
GO:0015908 P fatty acid transport
GO:0015909 P long-chain fatty acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:0031410 C cytoplasmic vesicle
GO:0031652 P positive regulation of heat generation
GO:0031957 F very long-chain fatty acid-CoA ligase activity
GO:0032049 P cardiolipin biosynthetic process
GO:0032868 P response to insulin
GO:0033211 P adiponectin-activated signaling pathway
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0071072 P negative regulation of phospholipid biosynthetic process
GO:0071902 P positive regulation of protein serine/threonine kinase activity
9879 O_BomoMSG18893_3prime_partial:A_BomoMSG_c26275_g1_i1
475bp
 unconventional_prefoldin_RPB5_interactor-like_protein_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001106 F transcription corepressor activity
GO:0001558 P regulation of cell growth
GO:0003682 F chromatin binding
GO:0004864 F protein phosphatase inhibitor activity
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0009615 P response to virus
GO:0010923 P negative regulation of phosphatase activity
GO:0019212 F phosphatase inhibitor activity
GO:0030425 C dendrite
GO:0042995 C cell projection
GO:0071363 P cellular response to growth factor stimulus
GO:0071383 P cellular response to steroid hormone stimulus
GO:2001243 P negative regulation of intrinsic apoptotic signaling pathway
9880 O_BomoMSG18894_3prime_partial:A_BomoMSG_c26276_g1_i1
292bp
 TATA-box-binding_protein_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
9881 O_BomoMSG18895_complete:A_BomoMSG_c26276_g1_i1
131bp
 hypothetical_protein_ALC57_16008,_partial_[Trachymyrmex_cornetzi]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
9882 O_BomoMSG18896_3prime_partial:A_BomoMSG_c26277_g1_i2
326bp
 protein_FAM50_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0022008 P neurogenesis
GO:0044822 F RNA binding
9883 O_BomoMSG18897_internal:A_BomoMSG_c26277_g1_i3
360bp
 protein_FAM50_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0022008 P neurogenesis
GO:0044822 F RNA binding
9884 O_BomoMSG18898_internal:A_BomoMSG_c26277_g1_i4
173bp
 protein_FAM50_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0022008 P neurogenesis
GO:0044822 F RNA binding
9885 O_BomoMSG18899_5prime_partial:A_BomoMSG_c26278_g1_i1
210bp
 dynamin-like_120_kDa_protein,_mitochondrial_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005758 C mitochondrial intermembrane space
GO:0006915 P apoptotic process
GO:0007005 P mitochondrion organization
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0043009 P chordate embryonic development
GO:0070584 P mitochondrion morphogenesis
9886 O_BomoMSG1889_internal:A_BomoMSG_c9301_g1_i1
122bp
 ribosomal_protein_S23_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005840 C ribosome
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
9887 O_BomoMSG188_internal:A_BomoMSG_c795_g1_i1
109bp
 copper-transporting_ATPase_2_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004008 F P-type divalent copper transporter activity
GO:0005375 F copper ion transmembrane transporter activity
GO:0005507 F copper ion binding
GO:0005524 F ATP binding
GO:0005770 C late endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005923 C bicellular tight junction
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006825 P copper ion transport
GO:0006878 P cellular copper ion homeostasis
GO:0006882 P cellular zinc ion homeostasis
GO:0007595 P lactation
GO:0007623 P circadian rhythm
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0010043 P response to zinc ion
GO:0015677 P copper ion import
GO:0015680 P protein maturation by copper ion transfer
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0016323 C basolateral plasma membrane
GO:0016787 F hydrolase activity
GO:0019829 F ATPase-coupled cation transmembrane transporter activity
GO:0030001 P metal ion transport
GO:0032588 C trans-Golgi network membrane
GO:0035434 P copper ion transmembrane transport
GO:0043682 F P-type divalent copper transporter activity
GO:0046688 P response to copper ion
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051208 P sequestering of calcium ion
GO:0051591 P response to cAMP
GO:0060003 P copper ion export
9888 O_BomoMSG18900_5prime_partial:A_BomoMSG_c26278_g1_i1
165bp
9889 O_BomoMSG18901_complete:A_BomoMSG_c26279_g1_i1
428bp
 mediator_of_RNA_polymerase_II_transcription_subunit_12_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0001105 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007275 P multicellular organism development
GO:0007406 P negative regulation of neuroblast proliferation
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0035072 P ecdysone-mediated induction of salivary gland cell autophagic cell death
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045498 P sex comb development
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
9890 O_BomoMSG18902_3prime_partial:A_BomoMSG_c26279_g1_i1
188bp
 mediator_of_RNA_polymerase_II_transcription_subunit_12_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0001105 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007275 P multicellular organism development
GO:0007406 P negative regulation of neuroblast proliferation
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0035072 P ecdysone-mediated induction of salivary gland cell autophagic cell death
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045498 P sex comb development
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
9891 O_BomoMSG18903_complete:A_BomoMSG_c26279_g1_i2
577bp
 mediator_of_RNA_polymerase_II_transcription_subunit_12_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0001105 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007275 P multicellular organism development
GO:0007406 P negative regulation of neuroblast proliferation
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0035072 P ecdysone-mediated induction of salivary gland cell autophagic cell death
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045498 P sex comb development
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
9892 O_BomoMSG18904_complete:A_BomoMSG_c26279_g1_i2
261bp
 mediator_of_RNA_polymerase_II_transcription_subunit_12_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0001105 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007275 P multicellular organism development
GO:0007406 P negative regulation of neuroblast proliferation
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0035072 P ecdysone-mediated induction of salivary gland cell autophagic cell death
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045498 P sex comb development
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
9893 O_BomoMSG18905_3prime_partial:A_BomoMSG_c26279_g1_i2
188bp
 mediator_of_RNA_polymerase_II_transcription_subunit_12_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0001105 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007275 P multicellular organism development
GO:0007406 P negative regulation of neuroblast proliferation
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0035072 P ecdysone-mediated induction of salivary gland cell autophagic cell death
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045498 P sex comb development
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
9894 O_BomoMSG18906_complete:A_BomoMSG_c26281_g2_i5
248bp
 peroxisomal_membrane_anchor_protein_[Bombyx_mori]
GO:0003714 F transcription corepressor activity
GO:0005102 F signaling receptor binding
GO:0005622 C intracellular anatomical structure
GO:0005730 C nucleolus
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0006461 P protein-containing complex assembly
GO:0006810 P transport
GO:0007031 P peroxisome organization
GO:0008017 F microtubule binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016558 P protein import into peroxisome matrix
GO:0016560 P protein import into peroxisome matrix, docking
GO:0016561 P protein import into peroxisome matrix, translocation
GO:0032091 P negative regulation of protein binding
GO:0034453 P microtubule anchoring
GO:0036250 P peroxisome transport along microtubule
GO:0042802 F identical protein binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0043234 C protein-containing complex
GO:0043433 P negative regulation of DNA-binding transcription factor activity
GO:0044721 P protein import into peroxisome matrix, substrate release
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0047485 F protein N-terminus binding
GO:0048487 F beta-tubulin binding
GO:0051260 P protein homooligomerization
GO:1901094 P negative regulation of protein homotetramerization
9895 O_BomoMSG18907_complete:A_BomoMSG_c26282_g1_i2
171bp
 calcineurin_B_[Bombyx_mori]
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005955 C calcineurin complex
GO:0006470 P protein dephosphorylation
GO:0007126 P meiotic cell cycle
GO:0007269 P neurotransmitter secretion
GO:0008021 C synaptic vesicle
GO:0008597 F calcium-dependent protein serine/threonine phosphatase regulator activity
GO:0016192 P vesicle-mediated transport
GO:0030241 P skeletal muscle myosin thick filament assembly
GO:0030431 P sleep
GO:0045214 P sarcomere organization
GO:0046872 F metal ion binding
GO:0050790 P regulation of catalytic activity
9896 O_BomoMSG18908_complete:A_BomoMSG_c26283_g1_i1
536bp
 uncharacterized_protein_LOC101745951_[Bombyx_mori]
GO:0000242 C pericentriolar material
GO:0000922 C spindle pole
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0036064 C ciliary basal body
GO:0045177 C apical part of cell
GO:0051301 P cell division
GO:0071539 P protein localization to centrosome
9897 O_BomoMSG18909_complete:A_BomoMSG_c26284_g2_i1
541bp
 caseinolytic_peptidase_B_protein_homolog_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0034605 P cellular response to heat
9898 O_BomoMSG1890_internal:A_BomoMSG_c9316_g1_i1
127bp
 glutaminase_liver_isoform,_mitochondrial_isoform_X5_[Bombyx_mori]
GO:0004359 F glutaminase activity
GO:0005759 C mitochondrial matrix
GO:0006537 P glutamate biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0006543 P glutamine catabolic process
GO:0016787 F hydrolase activity
9899 O_BomoMSG18910_complete:A_BomoMSG_c26284_g2_i1
150bp
9900 O_BomoMSG18911_complete:A_BomoMSG_c26284_g2_i1
104bp
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