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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9691 O_BomoMSG18723_complete:A_BomoMSG_c26218_g1_i3
124bp
9692 O_BomoMSG18724_complete:A_BomoMSG_c26219_g1_i1
496bp
 trichoplein_keratin_filament-binding_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
9693 O_BomoMSG18725_complete:A_BomoMSG_c26219_g1_i1
131bp
9694 O_BomoMSG18726_5prime_partial:A_BomoMSG_c26219_g1_i2
139bp
 trichoplein_keratin_filament-binding_protein_[Bombyx_mori]
9695 O_BomoMSG18727_complete:A_BomoMSG_c26221_g2_i1
116bp
 mitochondrial_pyruvate_carrier_1_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006810 P transport
GO:0006850 P mitochondrial pyruvate transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0050833 F pyruvate transmembrane transporter activity
GO:0061732 P mitochondrial acetyl-CoA biosynthetic process from pyruvate
GO:1902361 P mitochondrial pyruvate transmembrane transport
9696 O_BomoMSG18728_internal:A_BomoMSG_c26222_g1_i1
303bp
 uncharacterized_protein_LOC101740721_[Bombyx_mori]
9697 O_BomoMSG18729_complete:A_BomoMSG_c26222_g1_i1
142bp
9698 O_BomoMSG1872_internal:A_BomoMSG_c9159_g1_i1
107bp
9699 O_BomoMSG18730_internal:A_BomoMSG_c26224_g1_i1
733bp
 transcriptional_regulator_ATRX_homolog_isoform_X4_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0000775 C chromosome, centromeric region
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005722 C beta-heterochromatin
GO:0006281 P DNA repair
GO:0006336 P DNA replication-independent chromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0008347 P glial cell migration
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0032508 P DNA duplex unwinding
GO:0042585 C germinal vesicle
GO:0046328 P regulation of JNK cascade
GO:0051276 P chromosome organization
GO:0070868 P obsolete heterochromatin organization involved in chromatin silencing
GO:0097193 P intrinsic apoptotic signaling pathway
9700 O_BomoMSG18731_complete:A_BomoMSG_c26224_g1_i1
135bp
9701 O_BomoMSG18732_5prime_partial:A_BomoMSG_c26224_g1_i1
133bp
9702 O_BomoMSG18733_3prime_partial:A_BomoMSG_c26224_g1_i2
514bp
 transcriptional_regulator_ATRX_homolog_isoform_X4_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0000775 C chromosome, centromeric region
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005722 C beta-heterochromatin
GO:0006281 P DNA repair
GO:0006336 P DNA replication-independent chromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0008347 P glial cell migration
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0032508 P DNA duplex unwinding
GO:0042585 C germinal vesicle
GO:0046328 P regulation of JNK cascade
GO:0051276 P chromosome organization
GO:0070868 P obsolete heterochromatin organization involved in chromatin silencing
GO:0097193 P intrinsic apoptotic signaling pathway
9703 O_BomoMSG18734_5prime_partial:A_BomoMSG_c26224_g1_i2
138bp
9704 O_BomoMSG18735_complete:A_BomoMSG_c26224_g1_i2
135bp
9705 O_BomoMSG18736_5prime_partial:A_BomoMSG_c26224_g1_i2
133bp
9706 O_BomoMSG18737_internal:A_BomoMSG_c26224_g1_i3
498bp
 transcriptional_regulator_ATRX_homolog_isoform_X4_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0000775 C chromosome, centromeric region
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005722 C beta-heterochromatin
GO:0006281 P DNA repair
GO:0006336 P DNA replication-independent chromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0008347 P glial cell migration
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0032508 P DNA duplex unwinding
GO:0042585 C germinal vesicle
GO:0046328 P regulation of JNK cascade
GO:0051276 P chromosome organization
GO:0070868 P obsolete heterochromatin organization involved in chromatin silencing
GO:0097193 P intrinsic apoptotic signaling pathway
9707 O_BomoMSG18738_complete:A_BomoMSG_c26224_g1_i3
135bp
9708 O_BomoMSG18739_5prime_partial:A_BomoMSG_c26224_g1_i3
133bp
9709 O_BomoMSG1873_internal:A_BomoMSG_c9168_g1_i1
246bp
 uncharacterized_protein_LOC101742695_[Bombyx_mori]
9710 O_BomoMSG18740_5prime_partial:A_BomoMSG_c26224_g1_i3
112bp
9711 O_BomoMSG18741_internal:A_BomoMSG_c26224_g1_i4
342bp
 transcriptional_regulator_ATRX_homolog_isoform_X4_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0000775 C chromosome, centromeric region
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005722 C beta-heterochromatin
GO:0006281 P DNA repair
GO:0006336 P DNA replication-independent chromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0008347 P glial cell migration
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0032508 P DNA duplex unwinding
GO:0042585 C germinal vesicle
GO:0046328 P regulation of JNK cascade
GO:0051276 P chromosome organization
GO:0070868 P obsolete heterochromatin organization involved in chromatin silencing
GO:0097193 P intrinsic apoptotic signaling pathway
9712 O_BomoMSG18742_complete:A_BomoMSG_c26224_g1_i4
135bp
9713 O_BomoMSG18743_5prime_partial:A_BomoMSG_c26224_g1_i4
133bp
9714 O_BomoMSG18744_5prime_partial:A_BomoMSG_c26225_g1_i1
210bp
 mori_smoothened,_partial_[Bombyx_mori]
GO:0001707 P mesoderm formation
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0008104 P protein localization
GO:0009950 P dorsal/ventral axis specification
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0017147 F Wnt-protein binding
GO:0042813 F Wnt-activated receptor activity
GO:0045545 F syndecan binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048729 P tissue morphogenesis
GO:0060027 P convergent extension involved in gastrulation
GO:0060070 P canonical Wnt signaling pathway
9715 O_BomoMSG18745_5prime_partial:A_BomoMSG_c26225_g1_i2
356bp
 frizzled-7-B_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0042813 F Wnt-activated receptor activity
9716 O_BomoMSG18746_complete:A_BomoMSG_c26225_g1_i3
566bp
 frizzled-7-B_[Bombyx_mori]
GO:0001707 P mesoderm formation
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0008104 P protein localization
GO:0009950 P dorsal/ventral axis specification
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0017147 F Wnt-protein binding
GO:0042813 F Wnt-activated receptor activity
GO:0045545 F syndecan binding
GO:0048729 P tissue morphogenesis
GO:0060027 P convergent extension involved in gastrulation
9717 O_BomoMSG18747_complete:A_BomoMSG_c26225_g1_i3
157bp
9718 O_BomoMSG18748_5prime_partial:A_BomoMSG_c26226_g1_i1
263bp
 uncharacterized_protein_LOC105841501_[Bombyx_mori]
9719 O_BomoMSG18749_3prime_partial:A_BomoMSG_c26226_g1_i1
188bp
 hypothetical_protein_M513_10815_[Trichuris_suis]
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
9720 O_BomoMSG1874_3prime_partial:A_BomoMSG_c9176_g1_i1
142bp
 uncharacterized_protein_LOC101742755_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004601 F peroxidase activity
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0006909 P phagocytosis
GO:0006979 P response to oxidative stress
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0030198 P extracellular matrix organization
GO:0042744 P hydrogen peroxide catabolic process
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
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