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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9721 O_BomoMSG18750_5prime_partial:A_BomoMSG_c26226_g1_i2
263bp
 uncharacterized_protein_LOC105841501_[Bombyx_mori]
9722 O_BomoMSG18751_5prime_partial:A_BomoMSG_c26226_g1_i2
159bp
9723 O_BomoMSG18752_5prime_partial:A_BomoMSG_c26226_g1_i3
263bp
 uncharacterized_protein_LOC105841501_[Bombyx_mori]
9724 O_BomoMSG18753_3prime_partial:A_BomoMSG_c26226_g1_i3
164bp
 hypothetical_protein_M513_10815_[Trichuris_suis]
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
9725 O_BomoMSG18754_complete:A_BomoMSG_c26226_g1_i4
494bp
 gag-pol_polyprotein_[Lasius_niger]
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
9726 O_BomoMSG18755_5prime_partial:A_BomoMSG_c26226_g1_i4
263bp
 uncharacterized_protein_LOC105841501_[Bombyx_mori]
9727 O_BomoMSG18756_5prime_partial:A_BomoMSG_c26226_g1_i5
263bp
 uncharacterized_protein_LOC105841501_[Bombyx_mori]
9728 O_BomoMSG18757_3prime_partial:A_BomoMSG_c26226_g1_i5
260bp
 gag-pol_polyprotein_[Lasius_niger]
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
9729 O_BomoMSG18758_complete:A_BomoMSG_c26227_g1_i1
204bp
 PRADC1-like_protein_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005576 C extracellular region
GO:0007521 P muscle cell fate determination
9730 O_BomoMSG18759_5prime_partial:A_BomoMSG_c26227_g1_i2
130bp
 PRADC1-like_protein_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005576 C extracellular region
GO:0007521 P muscle cell fate determination
9731 O_BomoMSG1875_internal:A_BomoMSG_c9184_g1_i1
103bp
 ribosomal_protein_L18A_isoform_X1_[Bombyx_mori]
GO:0003735 F structural constituent of ribosome
GO:0005840 C ribosome
GO:0006412 P translation
GO:0030529 C ribonucleoprotein complex
9732 O_BomoMSG18760_internal:A_BomoMSG_c26228_g1_i1
299bp
 LOW_QUALITY_PROTEIN:_tyrosine-protein_phosphatase_non-receptor_type_11-like_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005737 C cytoplasm
GO:0006470 P protein dephosphorylation
GO:0007275 P multicellular organism development
GO:0007362 P terminal region determination
GO:0008293 P torso signaling pathway
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
9733 O_BomoMSG18761_complete:A_BomoMSG_c26228_g1_i1
118bp
9734 O_BomoMSG18762_internal:A_BomoMSG_c26228_g1_i2
239bp
 LOW_QUALITY_PROTEIN:_tyrosine-protein_phosphatase_non-receptor_type_11-like_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005737 C cytoplasm
GO:0006470 P protein dephosphorylation
GO:0007275 P multicellular organism development
GO:0007362 P terminal region determination
GO:0008293 P torso signaling pathway
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
9735 O_BomoMSG18763_complete:A_BomoMSG_c26228_g1_i2
118bp
9736 O_BomoMSG18764_3prime_partial:A_BomoMSG_c26228_g1_i3
562bp
 LOW_QUALITY_PROTEIN:_tyrosine-protein_phosphatase_non-receptor_type_11-like_[Bombyx_mori]
GO:0000077 P DNA damage checkpoint signaling
GO:0000187 P obsolete activation of MAPK activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0004726 F non-membrane spanning protein tyrosine phosphatase activity
GO:0005070 F obsolete SH3/SH2 adaptor activity
GO:0005158 F insulin receptor binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006470 P protein dephosphorylation
GO:0006629 P lipid metabolic process
GO:0006641 P triglyceride metabolic process
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007229 P integrin-mediated signaling pathway
GO:0007409 P axonogenesis
GO:0007420 P brain development
GO:0007507 P heart development
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0009755 P hormone-mediated signaling pathway
GO:0009967 P positive regulation of signal transduction
GO:0014066 P regulation of phosphatidylinositol 3-kinase signaling
GO:0016303 F 1-phosphatidylinositol-3-kinase activity
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0019904 F protein domain specific binding
GO:0021697 P cerebellar cortex formation
GO:0030168 P platelet activation
GO:0030220 P platelet formation
GO:0030971 F receptor tyrosine kinase binding
GO:0031295 P T cell costimulation
GO:0031748 F D1 dopamine receptor binding
GO:0032528 P microvillus organization
GO:0033277 P abortive mitotic cell cycle
GO:0033628 P regulation of cell adhesion mediated by integrin
GO:0033629 P negative regulation of cell adhesion mediated by integrin
GO:0035264 P multicellular organism growth
GO:0035265 P organ growth
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0035855 P megakaryocyte development
GO:0036092 P phosphatidylinositol-3-phosphate biosynthetic process
GO:0036302 P atrioventricular canal development
GO:0038127 P ERBB signaling pathway
GO:0040014 P regulation of multicellular organism growth
GO:0042445 P hormone metabolic process
GO:0042593 P glucose homeostasis
GO:0043234 C protein-containing complex
GO:0043254 P regulation of protein-containing complex assembly
GO:0043274 F phospholipase binding
GO:0043560 F insulin receptor substrate binding
GO:0045931 P positive regulation of mitotic cell cycle
GO:0046676 P negative regulation of insulin secretion
GO:0046825 P regulation of protein export from nucleus
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0046887 P positive regulation of hormone secretion
GO:0046888 P negative regulation of hormone secretion
GO:0046934 F phosphatidylinositol-4,5-bisphosphate 3-kinase activity
GO:0048008 P platelet-derived growth factor receptor signaling pathway
GO:0048011 P neurotrophin TRK receptor signaling pathway
GO:0048013 P ephrin receptor signaling pathway
GO:0048015 P phosphatidylinositol-mediated signaling
GO:0048609 P multicellular organismal reproductive process
GO:0048806 P genitalia development
GO:0048839 P inner ear development
GO:0048873 P homeostasis of number of cells within a tissue
GO:0050900 P leukocyte migration
GO:0051428 F peptide hormone receptor binding
GO:0051463 P negative regulation of cortisol secretion
GO:0060020 P Bergmann glial cell differentiation
GO:0060125 P negative regulation of growth hormone secretion
GO:0060325 P face morphogenesis
GO:0060338 P regulation of type I interferon-mediated signaling pathway
GO:0061582 P intestinal epithelial cell migration
GO:0070374 P positive regulation of ERK1 and ERK2 cascade
GO:2001275 P obsolete positive regulation of glucose import in response to insulin stimulus
9737 O_BomoMSG18765_complete:A_BomoMSG_c26228_g1_i3
118bp
9738 O_BomoMSG18766_complete:A_BomoMSG_c26229_g1_i1
340bp
 probable_cardiolipin_synthase_(CMP-forming)_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006629 P lipid metabolic process
GO:0006754 P ATP biosynthetic process
GO:0007006 P mitochondrial membrane organization
GO:0008654 P phospholipid biosynthetic process
GO:0008808 F cardiolipin synthase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016780 F phosphotransferase activity, for other substituted phosphate groups
GO:0032049 P cardiolipin biosynthetic process
9739 O_BomoMSG18767_internal:A_BomoMSG_c26231_g1_i1
197bp
 conserved_oligomeric_Golgi_complex_subunit_8_isoform_X2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017119 C Golgi transport complex
9740 O_BomoMSG18768_3prime_partial:A_BomoMSG_c26231_g1_i2
426bp
 conserved_oligomeric_Golgi_complex_subunit_8_isoform_X1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017119 C Golgi transport complex
9741 O_BomoMSG18769_3prime_partial:A_BomoMSG_c26231_g1_i3
244bp
 conserved_oligomeric_Golgi_complex_subunit_8_isoform_X2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017119 C Golgi transport complex
9742 O_BomoMSG1876_internal:A_BomoMSG_c9189_g1_i1
170bp
 protein_furry_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005938 C cell cortex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008407 P chaeta morphogenesis
GO:0016055 P Wnt signaling pathway
GO:0030424 C axon
GO:0030425 C dendrite
GO:0030427 C site of polarized growth
GO:0035316 P non-sensory hair organization
GO:0035317 P imaginal disc-derived wing hair organization
GO:0042052 P rhabdomere development
GO:0044297 C cell body
GO:0045177 C apical part of cell
GO:0045860 P positive regulation of protein kinase activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048601 P oocyte morphogenesis
GO:0048800 P antennal morphogenesis
GO:0048814 P regulation of dendrite morphogenesis
GO:0050773 P regulation of dendrite development
GO:0070593 P dendrite self-avoidance
GO:0090527 P actin filament reorganization
9743 O_BomoMSG18770_internal:A_BomoMSG_c26231_g1_i4
378bp
 conserved_oligomeric_Golgi_complex_subunit_8_isoform_X2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017119 C Golgi transport complex
9744 O_BomoMSG18771_internal:A_BomoMSG_c26233_g1_i1
145bp
 maternal_protein_tudor,_partial_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0007275 P multicellular organism development
GO:0007277 P pole cell development
GO:0007278 P pole cell fate determination
GO:0007281 P germ cell development
GO:0007315 P pole plasm assembly
GO:0008298 P intracellular mRNA localization
GO:0019090 P mitochondrial rRNA export from mitochondrion
GO:0030154 P cell differentiation
GO:0030719 P P granule organization
GO:0043186 C P granule
GO:0045495 C pole plasm
GO:0048477 P oogenesis
9745 O_BomoMSG18772_3prime_partial:A_BomoMSG_c26233_g1_i2
397bp
 maternal_protein_tudor,_partial_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0007140 P male meiotic nuclear division
GO:0007283 P spermatogenesis
GO:0009566 P fertilization
GO:0030154 P cell differentiation
GO:0031047 P gene silencing by RNA
GO:0034587 P piRNA metabolic process
GO:0043046 P DNA methylation involved in gamete generation
GO:0071546 C pi-body
GO:0071547 C piP-body
9746 O_BomoMSG18773_internal:A_BomoMSG_c26233_g1_i3
356bp
 maternal_protein_tudor,_partial_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0007275 P multicellular organism development
GO:0007277 P pole cell development
GO:0007278 P pole cell fate determination
GO:0007281 P germ cell development
GO:0007315 P pole plasm assembly
GO:0008298 P intracellular mRNA localization
GO:0019090 P mitochondrial rRNA export from mitochondrion
GO:0030154 P cell differentiation
GO:0030719 P P granule organization
GO:0043186 C P granule
GO:0045495 C pole plasm
GO:0048477 P oogenesis
9747 O_BomoMSG18774_internal:A_BomoMSG_c26233_g1_i4
332bp
 maternal_protein_tudor,_partial_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0007275 P multicellular organism development
GO:0007277 P pole cell development
GO:0007278 P pole cell fate determination
GO:0007281 P germ cell development
GO:0007315 P pole plasm assembly
GO:0008298 P intracellular mRNA localization
GO:0019090 P mitochondrial rRNA export from mitochondrion
GO:0030154 P cell differentiation
GO:0030719 P P granule organization
GO:0043186 C P granule
GO:0045495 C pole plasm
GO:0048477 P oogenesis
9748 O_BomoMSG18775_internal:A_BomoMSG_c26234_g1_i1
401bp
 uncharacterized_protein_LOC101739231_[Bombyx_mori]
9749 O_BomoMSG18776_5prime_partial:A_BomoMSG_c26234_g1_i1
380bp
9750 O_BomoMSG18777_complete:A_BomoMSG_c26235_g1_i1
275bp
 tetraspanin-5_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007166 P cell surface receptor signaling pathway
GO:0008283 P cell population proliferation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019899 F enzyme binding
GO:0045747 P positive regulation of Notch signaling pathway
GO:0051604 P protein maturation
GO:0090002 P protein localization to plasma membrane
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