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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9601 O_BomoMSG18642_complete:A_BomoMSG_c26195_g1_i4
1121bp
 ubiquitin_carboxyl-terminal_hydrolase_7_isoform_X2_[Bombyx_mori]
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007275 P multicellular organism development
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010216 P maintenance of DNA methylation
GO:0016579 P protein deubiquitination
GO:0016605 C PML body
GO:0016787 F hydrolase activity
GO:0031647 P regulation of protein stability
GO:0036459 F thiol-dependent deubiquitinase
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0051090 P regulation of DNA-binding transcription factor activity
9602 O_BomoMSG18643_complete:A_BomoMSG_c26195_g2_i2
269bp
 uncharacterized_protein_KIAA0930_homolog_[Bombyx_mori]
9603 O_BomoMSG18644_complete:A_BomoMSG_c26195_g2_i2
174bp
9604 O_BomoMSG18645_complete:A_BomoMSG_c26195_g2_i2
100bp
9605 O_BomoMSG18646_5prime_partial:A_BomoMSG_c26195_g2_i3
366bp
 uncharacterized_protein_KIAA0930_homolog_[Bombyx_mori]
9606 O_BomoMSG18647_complete:A_BomoMSG_c26195_g2_i3
174bp
9607 O_BomoMSG18648_complete:A_BomoMSG_c26195_g2_i3
100bp
9608 O_BomoMSG18649_5prime_partial:A_BomoMSG_c26195_g2_i4
193bp
9609 O_BomoMSG1864_internal:A_BomoMSG_c9118_g1_i1
126bp
 protein_KIAA0100_[Bombyx_mori]
9610 O_BomoMSG18650_complete:A_BomoMSG_c26195_g2_i5
300bp
 uncharacterized_protein_KIAA0930_homolog_[Bombyx_mori]
9611 O_BomoMSG18651_complete:A_BomoMSG_c26195_g2_i5
174bp
9612 O_BomoMSG18652_complete:A_BomoMSG_c26195_g2_i5
100bp
9613 O_BomoMSG18653_5prime_partial:A_BomoMSG_c26195_g2_i6
427bp
 uncharacterized_protein_KIAA0930_homolog_[Bombyx_mori]
9614 O_BomoMSG18654_complete:A_BomoMSG_c26195_g2_i6
174bp
9615 O_BomoMSG18655_complete:A_BomoMSG_c26195_g2_i6
132bp
9616 O_BomoMSG18656_complete:A_BomoMSG_c26195_g2_i6
100bp
9617 O_BomoMSG18657_5prime_partial:A_BomoMSG_c26195_g2_i7
214bp
9618 O_BomoMSG18658_5prime_partial:A_BomoMSG_c26195_g2_i7
106bp
 hypothetical_protein_RR48_08254_[Papilio_machaon]
9619 O_BomoMSG18659_5prime_partial:A_BomoMSG_c26196_g1_i1
120bp
9620 O_BomoMSG1865_complete:A_BomoMSG_c9121_g1_i1
145bp
 uncharacterized_protein_LOC101739606_[Bombyx_mori]
9621 O_BomoMSG18660_5prime_partial:A_BomoMSG_c26196_g1_i1
109bp
9622 O_BomoMSG18661_complete:A_BomoMSG_c26196_g1_i2
411bp
 group_XV_phospholipase_A2_[Bombyx_mori]
GO:0004622 F lysophospholipase activity
GO:0005543 F phospholipid binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005739 C mitochondrion
GO:0005764 C lysosome
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006650 P glycerophospholipid metabolic process
GO:0006672 P ceramide metabolic process
GO:0008374 F O-acyltransferase activity
GO:0009062 P fatty acid catabolic process
GO:0016020 C membrane
GO:0016042 P lipid catabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016787 F hydrolase activity
GO:0034638 P phosphatidylcholine catabolic process
GO:0046338 P phosphatidylethanolamine catabolic process
GO:0046470 P phosphatidylcholine metabolic process
GO:0047499 F calcium-independent phospholipase A2 activity
GO:0070062 C extracellular exosome
9623 O_BomoMSG18662_complete:A_BomoMSG_c26196_g1_i3
411bp
 group_XV_phospholipase_A2_[Bombyx_mori]
GO:0004622 F lysophospholipase activity
GO:0005543 F phospholipid binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005739 C mitochondrion
GO:0005764 C lysosome
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006650 P glycerophospholipid metabolic process
GO:0006672 P ceramide metabolic process
GO:0008374 F O-acyltransferase activity
GO:0009062 P fatty acid catabolic process
GO:0016020 C membrane
GO:0016042 P lipid catabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016787 F hydrolase activity
GO:0034638 P phosphatidylcholine catabolic process
GO:0046338 P phosphatidylethanolamine catabolic process
GO:0046470 P phosphatidylcholine metabolic process
GO:0047499 F calcium-independent phospholipase A2 activity
GO:0070062 C extracellular exosome
9624 O_BomoMSG18663_internal:A_BomoMSG_c26197_g1_i1
306bp
 general_transcription_factor_3C_polypeptide_5_[Bombyx_mori]
GO:0000127 C transcription factor TFIIIC complex
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0035914 P skeletal muscle cell differentiation
9625 O_BomoMSG18664_internal:A_BomoMSG_c26197_g1_i2
102bp
 general_transcription_factor_3C_polypeptide_5_[Bombyx_mori]
GO:0000127 C transcription factor TFIIIC complex
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0035914 P skeletal muscle cell differentiation
9626 O_BomoMSG18665_internal:A_BomoMSG_c26197_g1_i3
437bp
 general_transcription_factor_3C_polypeptide_5_[Bombyx_mori]
GO:0000127 C transcription factor TFIIIC complex
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0035914 P skeletal muscle cell differentiation
9627 O_BomoMSG18666_internal:A_BomoMSG_c26197_g1_i4
330bp
 general_transcription_factor_3C_polypeptide_5_[Bombyx_mori]
GO:0000127 C transcription factor TFIIIC complex
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0035914 P skeletal muscle cell differentiation
9628 O_BomoMSG18667_3prime_partial:A_BomoMSG_c26197_g1_i5
445bp
 general_transcription_factor_3C_polypeptide_5_[Bombyx_mori]
GO:0000127 C transcription factor TFIIIC complex
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0035914 P skeletal muscle cell differentiation
9629 O_BomoMSG18668_3prime_partial:A_BomoMSG_c26198_g1_i1
407bp
 probable_nucleoporin_Nup54_isoform_X1_[Bombyx_mori]
GO:0005487 F structural constituent of nuclear pore
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0006605 P protein targeting
GO:0006606 P protein import into nucleus
GO:0006607 P NLS-bearing protein import into nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0006999 P nuclear pore organization
GO:0015031 P protein transport
GO:0017056 F structural constituent of nuclear pore
GO:0036228 P protein localization to nuclear inner membrane
GO:0044613 C nuclear pore central transport channel
GO:0051028 P mRNA transport
9630 O_BomoMSG18669_complete:A_BomoMSG_c26199_g1_i1
239bp
 peroxisomal_membrane_protein_11B_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005779 C integral component of peroxisomal membrane
GO:0007031 P peroxisome organization
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016559 P peroxisome fission
GO:0042803 F protein homodimerization activity
GO:0043234 C protein-containing complex
GO:0044375 P regulation of peroxisome size
GO:0051260 P protein homooligomerization
GO:0070062 C extracellular exosome
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