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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9571 O_BomoMSG18615_internal:A_BomoMSG_c26188_g1_i1
117bp
 acyl-CoA_synthetase_family_member_2,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
9572 O_BomoMSG18616_internal:A_BomoMSG_c26188_g1_i2
304bp
 acyl-CoA_synthetase_family_member_2,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
9573 O_BomoMSG18617_complete:A_BomoMSG_c26188_g1_i2
162bp
 Uncharacterised_protein_[Mycobacterium_tuberculosis]
9574 O_BomoMSG18618_internal:A_BomoMSG_c26188_g1_i3
591bp
 acyl-CoA_synthetase_family_member_2,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
9575 O_BomoMSG18619_complete:A_BomoMSG_c26188_g1_i3
162bp
 Uncharacterised_protein_[Mycobacterium_tuberculosis]
9576 O_BomoMSG1861_internal:A_BomoMSG_c9099_g1_i1
129bp
 uncharacterized_protein_LOC101741769_[Bombyx_mori]
9577 O_BomoMSG18620_internal:A_BomoMSG_c26188_g1_i4
495bp
 acyl-CoA_synthetase_family_member_2,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
9578 O_BomoMSG18621_complete:A_BomoMSG_c26188_g1_i4
162bp
 Uncharacterised_protein_[Mycobacterium_tuberculosis]
9579 O_BomoMSG18622_internal:A_BomoMSG_c26188_g1_i5
330bp
 acyl-CoA_synthetase_family_member_2,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
9580 O_BomoMSG18623_complete:A_BomoMSG_c26188_g1_i5
162bp
 Uncharacterised_protein_[Mycobacterium_tuberculosis]
9581 O_BomoMSG18624_5prime_partial:A_BomoMSG_c26189_g1_i1
128bp
 arylsulfatase_B_[Bombyx_mori]
9582 O_BomoMSG18625_5prime_partial:A_BomoMSG_c26189_g1_i2
507bp
 arylsulfatase_B_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004065 F arylsulfatase activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006687 P glycosphingolipid metabolic process
GO:0008152 P metabolic process
GO:0008484 F sulfuric ester hydrolase activity
GO:0016787 F hydrolase activity
GO:0043687 P post-translational protein modification
GO:0046872 F metal ion binding
9583 O_BomoMSG18626_5prime_partial:A_BomoMSG_c26190_g1_i1
264bp
 low_molecular_30_kDa_lipoprotein_PBMHPC-19_isoform_X1_[Bombyx_mori]
GO:0005576 C extracellular region
9584 O_BomoMSG18627_5prime_partial:A_BomoMSG_c26190_g1_i1
223bp
9585 O_BomoMSG18628_internal:A_BomoMSG_c26190_g1_i2
113bp
9586 O_BomoMSG18629_5prime_partial:A_BomoMSG_c26190_g1_i3
212bp
 low_molecular_30_kDa_lipoprotein_PBMHPC-19_isoform_X1_[Bombyx_mori]
GO:0005576 C extracellular region
9587 O_BomoMSG1862_internal:A_BomoMSG_c9105_g1_i1
109bp
 PREDICTED:_uncharacterized_protein_LOC105663392_[Megachile_rotundata]
9588 O_BomoMSG18630_5prime_partial:A_BomoMSG_c26190_g1_i3
125bp
9589 O_BomoMSG18631_5prime_partial:A_BomoMSG_c26191_g2_i1
139bp
9590 O_BomoMSG18632_5prime_partial:A_BomoMSG_c26192_g1_i1
254bp
 RNA-binding_protein_45_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0008150 P biological_process
GO:0030154 P cell differentiation
GO:0044822 F RNA binding
9591 O_BomoMSG18633_5prime_partial:A_BomoMSG_c26192_g1_i1
115bp
9592 O_BomoMSG18634_5prime_partial:A_BomoMSG_c26192_g1_i3
190bp
 RNA-binding_protein_45_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0008150 P biological_process
GO:0030154 P cell differentiation
GO:0044822 F RNA binding
9593 O_BomoMSG18635_5prime_partial:A_BomoMSG_c26192_g1_i3
115bp
9594 O_BomoMSG18636_complete:A_BomoMSG_c26192_g1_i4
487bp
 RNA-binding_protein_45_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0030154 P cell differentiation
9595 O_BomoMSG18637_5prime_partial:A_BomoMSG_c26192_g1_i4
115bp
9596 O_BomoMSG18638_3prime_partial:A_BomoMSG_c26193_g1_i1
311bp
 probable_leucine--tRNA_ligase,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004823 F leucine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006429 P leucyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0016874 F ligase activity
9597 O_BomoMSG18639_complete:A_BomoMSG_c26194_g1_i1
225bp
 ras-related_protein_Rab-9B_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019003 F GDP binding
GO:0030670 C phagocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032880 P regulation of protein localization
GO:0042147 P retrograde transport, endosome to Golgi
GO:0045335 C phagocytic vesicle
GO:0045921 P positive regulation of exocytosis
GO:0052405 P negative regulation by host of symbiont catalytic activity
GO:0070062 C extracellular exosome
9598 O_BomoMSG1863_internal:A_BomoMSG_c9117_g1_i1
121bp
 proton-coupled_folate_transporter_isoform_X2_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
9599 O_BomoMSG18640_complete:A_BomoMSG_c26195_g1_i1
1112bp
 ubiquitin_carboxyl-terminal_hydrolase_7_isoform_X5_[Bombyx_mori]
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007275 P multicellular organism development
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010216 P maintenance of DNA methylation
GO:0016579 P protein deubiquitination
GO:0016605 C PML body
GO:0016787 F hydrolase activity
GO:0031647 P regulation of protein stability
GO:0036459 F thiol-dependent deubiquitinase
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0051090 P regulation of DNA-binding transcription factor activity
9600 O_BomoMSG18641_complete:A_BomoMSG_c26195_g1_i2
1116bp
 ubiquitin_carboxyl-terminal_hydrolase_7_isoform_X5_[Bombyx_mori]
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007275 P multicellular organism development
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010216 P maintenance of DNA methylation
GO:0016579 P protein deubiquitination
GO:0016605 C PML body
GO:0016787 F hydrolase activity
GO:0031647 P regulation of protein stability
GO:0036459 F thiol-dependent deubiquitinase
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0051090 P regulation of DNA-binding transcription factor activity
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