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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9361 O_BomoMSG18426_internal:A_BomoMSG_c26129_g1_i2
414bp
 major_facilitator_superfamily_domain-containing_protein_6_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
9362 O_BomoMSG18427_3prime_partial:A_BomoMSG_c26129_g1_i3
531bp
 major_facilitator_superfamily_domain-containing_protein_6_[Bombyx_mori]
GO:0002250 P adaptive immune response
GO:0002376 P immune system process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
9363 O_BomoMSG18428_complete:A_BomoMSG_c26130_g1_i1
1147bp
 cell_division_cycle_and_apoptosis_regulator_protein_1_[Bombyx_mori]
GO:0001047 F core promoter sequence-specific DNA binding
GO:0003713 F transcription coactivator activity
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005641 C nuclear envelope lumen
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0030335 P positive regulation of cell migration
GO:0030374 F nuclear receptor coactivator activity
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:1903507 P negative regulation of nucleic acid-templated transcription
9364 O_BomoMSG18429_complete:A_BomoMSG_c26131_g1_i1
347bp
 lactate_dehydrogenase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004459 F L-lactate dehydrogenase activity
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0006096 P glycolytic process
GO:0007520 P myoblast fusion
GO:0007525 P somatic muscle development
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0019752 P carboxylic acid metabolic process
GO:0055114 P obsolete oxidation-reduction process
9365 O_BomoMSG1842_internal:A_BomoMSG_c8953_g1_i1
290bp
 nuclear_pore_complex_protein_Nup98-Nup96_[Bombyx_mori]
GO:0000059 P obsolete protein import into nucleus, docking
GO:0000776 C kinetochore
GO:0000973 P posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0003723 F RNA binding
GO:0005215 F transporter activity
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005829 C cytosol
GO:0006260 P DNA replication
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0006999 P nuclear pore organization
GO:0007062 P sister chromatid cohesion
GO:0007077 P mitotic nuclear membrane disassembly
GO:0008139 F nuclear localization sequence binding
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0017056 F structural constituent of nuclear pore
GO:0019083 P viral transcription
GO:0031047 P gene silencing by RNA
GO:0031080 C nuclear pore outer ring
GO:0031965 C nuclear membrane
GO:0034398 P telomere tethering at nuclear periphery
GO:0034399 C nuclear periphery
GO:0042277 F peptide binding
GO:0042405 C nuclear inclusion body
GO:0044614 C nuclear pore cytoplasmic filaments
GO:0044615 C nuclear pore nuclear basket
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
GO:0075733 P intracellular transport of virus
GO:1900034 P regulation of cellular response to heat
9366 O_BomoMSG18430_complete:A_BomoMSG_c26131_g1_i2
347bp
 lactate_dehydrogenase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004459 F L-lactate dehydrogenase activity
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0006096 P glycolytic process
GO:0007520 P myoblast fusion
GO:0007525 P somatic muscle development
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0019752 P carboxylic acid metabolic process
GO:0055114 P obsolete oxidation-reduction process
9367 O_BomoMSG18431_complete:A_BomoMSG_c26131_g1_i3
332bp
 lactate_dehydrogenase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004459 F L-lactate dehydrogenase activity
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0006096 P glycolytic process
GO:0007520 P myoblast fusion
GO:0007525 P somatic muscle development
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0019752 P carboxylic acid metabolic process
GO:0055114 P obsolete oxidation-reduction process
9368 O_BomoMSG18432_complete:A_BomoMSG_c26132_g2_i1
412bp
 TAR_DNA-binding_protein_43-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
9369 O_BomoMSG18433_5prime_partial:A_BomoMSG_c26132_g2_i2
398bp
 TAR_DNA-binding_protein_43-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
9370 O_BomoMSG18434_3prime_partial:A_BomoMSG_c26133_g1_i1
204bp
 lysophospholipase-like_protein_1_[Bombyx_mori]
GO:0002084 P protein depalmitoylation
GO:0004622 F lysophospholipase activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0008474 F palmitoyl-(protein) hydrolase activity
GO:0016787 F hydrolase activity
GO:0052689 F carboxylic ester hydrolase activity
GO:0070062 C extracellular exosome
9371 O_BomoMSG18435_internal:A_BomoMSG_c26133_g1_i2
180bp
 lysophospholipase-like_protein_1_[Bombyx_mori]
GO:0002084 P protein depalmitoylation
GO:0004622 F lysophospholipase activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008150 P biological_process
GO:0008474 F palmitoyl-(protein) hydrolase activity
GO:0016787 F hydrolase activity
GO:0052689 F carboxylic ester hydrolase activity
GO:0070062 C extracellular exosome
9372 O_BomoMSG18436_complete:A_BomoMSG_c26134_g1_i1
161bp
 putative_gamma-glutamylcyclotransferase_CG2811_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
9373 O_BomoMSG18437_complete:A_BomoMSG_c26134_g1_i2
161bp
 putative_gamma-glutamylcyclotransferase_CG2811_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
9374 O_BomoMSG18438_complete:A_BomoMSG_c26134_g1_i3
172bp
 putative_gamma-glutamylcyclotransferase_CG2811_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
9375 O_BomoMSG18439_complete:A_BomoMSG_c26134_g1_i4
172bp
 putative_gamma-glutamylcyclotransferase_CG2811_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
9376 O_BomoMSG1843_5prime_partial:A_BomoMSG_c8953_g1_i1
170bp
9377 O_BomoMSG18440_complete:A_BomoMSG_c26134_g1_i5
172bp
 putative_gamma-glutamylcyclotransferase_CG2811_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
9378 O_BomoMSG18441_5prime_partial:A_BomoMSG_c26135_g1_i1
149bp
 DNA-directed_RNA_polymerase_III_subunit_RPC1_[Bombyx_mori]
GO:0001056 F RNA polymerase III activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005666 C RNA polymerase III complex
GO:0006351 P transcription, DNA-templated
GO:0006383 P transcription by RNA polymerase III
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
9379 O_BomoMSG18442_5prime_partial:A_BomoMSG_c26135_g1_i2
563bp
 DNA-directed_RNA_polymerase_III_subunit_RPC1_[Bombyx_mori]
GO:0001056 F RNA polymerase III activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005666 C RNA polymerase III complex
GO:0006351 P transcription, DNA-templated
GO:0006383 P transcription by RNA polymerase III
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
9380 O_BomoMSG18443_3prime_partial:A_BomoMSG_c26135_g1_i2
364bp
9381 O_BomoMSG18444_complete:A_BomoMSG_c26135_g1_i3
972bp
 DNA-directed_RNA_polymerase_III_subunit_RPC1_[Bombyx_mori]
GO:0001056 F RNA polymerase III activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005666 C RNA polymerase III complex
GO:0006351 P transcription, DNA-templated
GO:0006383 P transcription by RNA polymerase III
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
9382 O_BomoMSG18445_complete:A_BomoMSG_c26135_g1_i3
431bp
9383 O_BomoMSG18446_complete:A_BomoMSG_c26135_g1_i3
110bp
 hypothetical_protein_L798_06674_[Zootermopsis_nevadensis]
9384 O_BomoMSG18447_complete:A_BomoMSG_c26135_g1_i3
110bp
9385 O_BomoMSG18448_5prime_partial:A_BomoMSG_c26135_g1_i4
568bp
 DNA-directed_RNA_polymerase_III_subunit_RPC1_[Bombyx_mori]
GO:0001056 F RNA polymerase III activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005666 C RNA polymerase III complex
GO:0006351 P transcription, DNA-templated
GO:0006383 P transcription by RNA polymerase III
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
9386 O_BomoMSG18449_3prime_partial:A_BomoMSG_c26135_g1_i4
369bp
9387 O_BomoMSG1844_5prime_partial:A_BomoMSG_c8953_g1_i1
139bp
9388 O_BomoMSG18450_5prime_partial:A_BomoMSG_c26135_g1_i5
540bp
 DNA-directed_RNA_polymerase_III_subunit_RPC1_[Bombyx_mori]
GO:0001056 F RNA polymerase III activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005666 C RNA polymerase III complex
GO:0006351 P transcription, DNA-templated
GO:0006383 P transcription by RNA polymerase III
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
9389 O_BomoMSG18451_3prime_partial:A_BomoMSG_c26135_g1_i5
341bp
9390 O_BomoMSG18452_3prime_partial:A_BomoMSG_c26136_g1_i1
416bp
 serine/threonine-protein_kinase_S6KL_isoform_X1_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
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