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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9391 O_BomoMSG18453_complete:A_BomoMSG_c26136_g1_i2
305bp
 serine/threonine-protein_kinase_S6KL_isoform_X2_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
9392 O_BomoMSG18454_3prime_partial:A_BomoMSG_c26137_g1_i1
427bp
 polycomb_group_protein_Psc_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000922 C spindle pole
GO:0003682 F chromatin binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005819 C spindle
GO:0006260 P DNA replication
GO:0006270 P DNA replication initiation
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0019900 F kinase binding
GO:0030071 P regulation of mitotic metaphase/anaphase transition
GO:0032467 P positive regulation of cytokinesis
GO:0051233 C spindle midzone
GO:0051301 P cell division
GO:0051984 P positive regulation of chromosome segregation
9393 O_BomoMSG18455_5prime_partial:A_BomoMSG_c26137_g1_i1
149bp
9394 O_BomoMSG18456_complete:A_BomoMSG_c26137_g1_i1
143bp
9395 O_BomoMSG18457_internal:A_BomoMSG_c26137_g1_i2
182bp
 polycomb_group_protein_Psc_[Bombyx_mori]
GO:0000076 P DNA replication checkpoint signaling
GO:0000079 P regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000083 P regulation of transcription involved in G1/S transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0000922 C spindle pole
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006260 P DNA replication
GO:0006270 P DNA replication initiation
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007089 P traversing start control point of mitotic cell cycle
GO:0008156 P negative regulation of DNA replication
GO:0008285 P negative regulation of cell population proliferation
GO:0019900 F kinase binding
GO:0030071 P regulation of mitotic metaphase/anaphase transition
GO:0032467 P positive regulation of cytokinesis
GO:0045737 P positive regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0048146 P positive regulation of fibroblast proliferation
GO:0051233 C spindle midzone
GO:0051301 P cell division
GO:0051984 P positive regulation of chromosome segregation
GO:1904117 P cellular response to vasopressin
GO:1904385 P cellular response to angiotensin
9396 O_BomoMSG18458_5prime_partial:A_BomoMSG_c26137_g1_i2
149bp
9397 O_BomoMSG18459_internal:A_BomoMSG_c26137_g1_i3
388bp
 polycomb_group_protein_Psc_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000922 C spindle pole
GO:0003682 F chromatin binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005819 C spindle
GO:0006260 P DNA replication
GO:0006270 P DNA replication initiation
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0019900 F kinase binding
GO:0030071 P regulation of mitotic metaphase/anaphase transition
GO:0032467 P positive regulation of cytokinesis
GO:0051233 C spindle midzone
GO:0051301 P cell division
GO:0051984 P positive regulation of chromosome segregation
9398 O_BomoMSG1845_3prime_partial:A_BomoMSG_c8953_g1_i1
101bp
9399 O_BomoMSG18460_5prime_partial:A_BomoMSG_c26137_g1_i3
149bp
9400 O_BomoMSG18461_complete:A_BomoMSG_c26137_g1_i3
143bp
9401 O_BomoMSG18462_3prime_partial:A_BomoMSG_c26138_g1_i1
115bp
 glycogen_[starch]_synthase_[Bombyx_mori]
GO:0004373 F glycogen (starch) synthase activity
GO:0005776 C autophagosome
GO:0005977 P glycogen metabolic process
GO:0005978 P glycogen biosynthetic process
GO:0009267 P cellular response to starvation
GO:0009744 P response to sucrose
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0031410 C cytoplasmic vesicle
GO:0045819 P positive regulation of glycogen catabolic process
GO:0061723 P glycophagy
GO:0071329 P cellular response to sucrose stimulus
9402 O_BomoMSG18463_complete:A_BomoMSG_c26138_g1_i2
693bp
 glycogen_[starch]_synthase_[Bombyx_mori]
GO:0004373 F glycogen (starch) synthase activity
GO:0005776 C autophagosome
GO:0005977 P glycogen metabolic process
GO:0005978 P glycogen biosynthetic process
GO:0009267 P cellular response to starvation
GO:0009744 P response to sucrose
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0031410 C cytoplasmic vesicle
GO:0045819 P positive regulation of glycogen catabolic process
GO:0061723 P glycophagy
GO:0071329 P cellular response to sucrose stimulus
9403 O_BomoMSG18464_complete:A_BomoMSG_c26138_g1_i2
161bp
9404 O_BomoMSG18465_complete:A_BomoMSG_c26138_g1_i2
125bp
9405 O_BomoMSG18466_complete:A_BomoMSG_c26138_g1_i3
693bp
 glycogen_[starch]_synthase_[Bombyx_mori]
GO:0004373 F glycogen (starch) synthase activity
GO:0005776 C autophagosome
GO:0005977 P glycogen metabolic process
GO:0005978 P glycogen biosynthetic process
GO:0009267 P cellular response to starvation
GO:0009744 P response to sucrose
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0031410 C cytoplasmic vesicle
GO:0045819 P positive regulation of glycogen catabolic process
GO:0061723 P glycophagy
GO:0071329 P cellular response to sucrose stimulus
9406 O_BomoMSG18467_complete:A_BomoMSG_c26138_g1_i3
161bp
9407 O_BomoMSG18468_complete:A_BomoMSG_c26138_g1_i3
125bp
9408 O_BomoMSG18469_complete:A_BomoMSG_c26138_g1_i4
278bp
 glycogen_[starch]_synthase_[Bombyx_mori]
GO:0004373 F glycogen (starch) synthase activity
GO:0005776 C autophagosome
GO:0005977 P glycogen metabolic process
GO:0005978 P glycogen biosynthetic process
GO:0009267 P cellular response to starvation
GO:0009744 P response to sucrose
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0031410 C cytoplasmic vesicle
GO:0045819 P positive regulation of glycogen catabolic process
GO:0061723 P glycophagy
GO:0071329 P cellular response to sucrose stimulus
9409 O_BomoMSG1846_3prime_partial:A_BomoMSG_c8975_g1_i1
185bp
 blood_vessel_epicardial_substance_isoform_X3_[Bombyx_mori]
GO:0001921 P positive regulation of receptor recycling
GO:0002027 P regulation of heart rate
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005923 C bicellular tight junction
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0007507 P heart development
GO:0007519 P skeletal muscle tissue development
GO:0008360 P regulation of cell shape
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0016328 C lateral plasma membrane
GO:0030054 C cell junction
GO:0030552 F cAMP binding
GO:0031253 C cell projection membrane
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0040017 P positive regulation of locomotion
GO:0042383 C sarcolemma
GO:0042391 P regulation of membrane potential
GO:0043087 P regulation of GTPase activity
GO:0048278 P vesicle docking
GO:0060931 P sinoatrial node cell development
GO:0060973 P cell migration involved in heart development
GO:0090136 P epithelial cell-cell adhesion
GO:2001135 P regulation of endocytic recycling
9410 O_BomoMSG18470_complete:A_BomoMSG_c26138_g1_i4
125bp
9411 O_BomoMSG18471_3prime_partial:A_BomoMSG_c26139_g1_i1
878bp
 zinc_finger_protein_59-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
9412 O_BomoMSG18472_3prime_partial:A_BomoMSG_c26139_g1_i2
197bp
 zinc_finger_protein_59-like_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007249 P I-kappaB kinase/NF-kappaB signaling
GO:0008270 F zinc ion binding
GO:0010804 P negative regulation of tumor necrosis factor-mediated signaling pathway
GO:0019221 P cytokine-mediated signaling pathway
GO:0031625 F ubiquitin protein ligase binding
GO:0032088 P negative regulation of NF-kappaB transcription factor activity
GO:0043508 P negative regulation of JUN kinase activity
GO:0045453 P bone resorption
GO:0045671 P negative regulation of osteoclast differentiation
GO:0046329 P negative regulation of JNK cascade
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:2000660 P negative regulation of interleukin-1-mediated signaling pathway
GO:2000678 P negative regulation of transcription regulatory region DNA binding
9413 O_BomoMSG18473_3prime_partial:A_BomoMSG_c26139_g1_i3
162bp
 zinc_finger_protein_59-like_[Bombyx_mori]
9414 O_BomoMSG18474_3prime_partial:A_BomoMSG_c26139_g1_i4
701bp
 zinc_finger_protein_59-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
9415 O_BomoMSG18475_5prime_partial:A_BomoMSG_c26139_g3_i1
134bp
 zinc_finger_protein_59-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
9416 O_BomoMSG18476_5prime_partial:A_BomoMSG_c26139_g3_i1
124bp
9417 O_BomoMSG18477_3prime_partial:A_BomoMSG_c26139_g3_i1
117bp
9418 O_BomoMSG18478_3prime_partial:A_BomoMSG_c26141_g1_i1
195bp
 dnaJ_(Hsp40)_homolog_11_isoform_X1_[Bombyx_mori]
GO:0005739 C mitochondrion
9419 O_BomoMSG18479_5prime_partial:A_BomoMSG_c26142_g1_i1
209bp
 exonuclease_GOR-like_isoform_X1_[Helicoverpa_armigera]
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
9420 O_BomoMSG1847_complete:A_BomoMSG_c8985_g1_i1
286bp
 LOW_QUALITY_PROTEIN:_ER_membrane_protein_complex_subunit_2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0072546 C EMC complex
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