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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
9001 O_BomoMSG18101_complete:A_BomoMSG_c26042_g1_i1
145bp
9002 O_BomoMSG18102_3prime_partial:A_BomoMSG_c26042_g1_i1
144bp
9003 O_BomoMSG18103_5prime_partial:A_BomoMSG_c26042_g1_i2
124bp
 PREDICTED:_coiled-coil_domain-containing_protein_6-like_isoform_X1_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0008150 P biological_process
GO:0017124 F SH3 domain binding
9004 O_BomoMSG18104_3prime_partial:A_BomoMSG_c26042_g1_i2
117bp
9005 O_BomoMSG18105_complete:A_BomoMSG_c26043_g1_i2
216bp
 glutathione_S-transferase_zeta_1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004364 F glutathione transferase activity
GO:0005737 C cytoplasm
GO:0006559 P L-phenylalanine catabolic process
GO:0006572 P tyrosine catabolic process
GO:0006749 P glutathione metabolic process
GO:0009072 P aromatic amino acid family metabolic process
GO:0016034 F maleylacetoacetate isomerase activity
GO:0016740 F transferase activity
GO:0016853 F isomerase activity
9006 O_BomoMSG18106_complete:A_BomoMSG_c26044_g1_i1
204bp
 tRNA-splicing_endonuclease_subunit_Sen34_[Bombyx_mori]
GO:0000213 F tRNA-intron endonuclease activity
GO:0000214 C tRNA-intron endonuclease complex
GO:0000379 P tRNA-type intron splice site recognition and cleavage
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0006388 P tRNA splicing, via endonucleolytic cleavage and ligation
GO:0008033 P tRNA processing
GO:0016829 F lyase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
9007 O_BomoMSG18107_complete:A_BomoMSG_c26044_g1_i1
103bp
9008 O_BomoMSG18108_3prime_partial:A_BomoMSG_c26044_g1_i3
280bp
 tRNA-splicing_endonuclease_subunit_Sen34_[Bombyx_mori]
GO:0000213 F tRNA-intron endonuclease activity
GO:0000214 C tRNA-intron endonuclease complex
GO:0000379 P tRNA-type intron splice site recognition and cleavage
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006388 P tRNA splicing, via endonucleolytic cleavage and ligation
GO:0006397 P mRNA processing
GO:0008033 P tRNA processing
GO:0016829 F lyase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
9009 O_BomoMSG18109_complete:A_BomoMSG_c26044_g1_i3
103bp
9010 O_BomoMSG1810_internal:A_BomoMSG_c8836_g1_i1
227bp
 kelch-like_ECH-associated_protein_1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0010499 P proteasomal ubiquitin-independent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0031463 C Cul3-RING ubiquitin ligase complex
9011 O_BomoMSG18110_3prime_partial:A_BomoMSG_c26044_g1_i4
150bp
 tRNA-splicing_endonuclease_subunit_Sen34_[Bombyx_mori]
GO:0000213 F tRNA-intron endonuclease activity
GO:0000214 C tRNA-intron endonuclease complex
GO:0000379 P tRNA-type intron splice site recognition and cleavage
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006388 P tRNA splicing, via endonucleolytic cleavage and ligation
GO:0006397 P mRNA processing
GO:0008033 P tRNA processing
GO:0016829 F lyase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
9012 O_BomoMSG18111_complete:A_BomoMSG_c26044_g1_i5
204bp
 tRNA-splicing_endonuclease_subunit_Sen34_[Bombyx_mori]
GO:0000213 F tRNA-intron endonuclease activity
GO:0000214 C tRNA-intron endonuclease complex
GO:0000379 P tRNA-type intron splice site recognition and cleavage
GO:0003676 F nucleic acid binding
GO:0004518 F nuclease activity
GO:0006388 P tRNA splicing, via endonucleolytic cleavage and ligation
GO:0008033 P tRNA processing
GO:0016829 F lyase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
9013 O_BomoMSG18112_complete:A_BomoMSG_c26044_g1_i5
103bp
9014 O_BomoMSG18113_5prime_partial:A_BomoMSG_c26045_g1_i1
1238bp
 balbiani_ring_protein_3_isoform_X2_[Bombyx_mori]
GO:0005102 F signaling receptor binding
GO:0005179 F hormone activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006590 P thyroid hormone generation
GO:0009268 P response to pH
GO:0015705 P iodide transport
GO:0030878 P thyroid gland development
GO:0031641 P regulation of myelination
GO:0032403 F protein-containing complex binding
GO:0032496 P response to lipopolysaccharide
GO:0042403 P thyroid hormone metabolic process
GO:0042446 P hormone biosynthetic process
GO:0042803 F protein homodimerization activity
GO:0043168 F anion binding
GO:0043234 C protein-containing complex
GO:0045056 P transcytosis
GO:0048471 C perinuclear region of cytoplasm
GO:0051087 F chaperone binding
GO:0052689 F carboxylic ester hydrolase activity
9015 O_BomoMSG18114_complete:A_BomoMSG_c26045_g1_i1
196bp
9016 O_BomoMSG18115_complete:A_BomoMSG_c26045_g1_i1
142bp
9017 O_BomoMSG18116_complete:A_BomoMSG_c26045_g1_i1
134bp
9018 O_BomoMSG18117_complete:A_BomoMSG_c26045_g1_i1
117bp
9019 O_BomoMSG18118_complete:A_BomoMSG_c26045_g1_i1
116bp
9020 O_BomoMSG18119_5prime_partial:A_BomoMSG_c26045_g1_i1
102bp
9021 O_BomoMSG1811_5prime_partial:A_BomoMSG_c8843_g1_i1
199bp
 ribosome-releasing_factor_2,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0006412 P translation
GO:0032543 P mitochondrial translation
GO:0032790 P ribosome disassembly
9022 O_BomoMSG18120_5prime_partial:A_BomoMSG_c26045_g1_i2
434bp
 kielin/chordin-like_protein_isoform_X1_[Bombyx_mori]
GO:0004869 F cysteine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
9023 O_BomoMSG18121_5prime_partial:A_BomoMSG_c26045_g1_i2
102bp
9024 O_BomoMSG18122_complete:A_BomoMSG_c26045_g1_i3
1449bp
 balbiani_ring_protein_3_isoform_X2_[Bombyx_mori]
GO:0004869 F cysteine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
9025 O_BomoMSG18123_complete:A_BomoMSG_c26045_g1_i3
196bp
9026 O_BomoMSG18124_complete:A_BomoMSG_c26045_g1_i3
142bp
9027 O_BomoMSG18125_complete:A_BomoMSG_c26045_g1_i3
134bp
9028 O_BomoMSG18126_complete:A_BomoMSG_c26045_g1_i3
117bp
9029 O_BomoMSG18127_complete:A_BomoMSG_c26045_g1_i3
116bp
9030 O_BomoMSG18128_5prime_partial:A_BomoMSG_c26045_g1_i3
102bp
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