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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8641 O_BomoMSG17779_complete:A_BomoMSG_c25943_g1_i4
480bp
 UDP-glucose_6-dehydrogenase_[Bombyx_mori]
GO:0002121 P inter-male aggressive behavior
GO:0003979 F UDP-glucose 6-dehydrogenase activity
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0006065 P UDP-glucuronate biosynthetic process
GO:0007166 P cell surface receptor signaling pathway
GO:0007224 P smoothened signaling pathway
GO:0007367 P segment polarity determination
GO:0007427 P epithelial cell migration, open tracheal system
GO:0007428 P primary branching, open tracheal system
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007507 P heart development
GO:0007509 P mesoderm migration involved in gastrulation
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0015012 P heparan sulfate proteoglycan biosynthetic process
GO:0015014 P heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process
GO:0016055 P Wnt signaling pathway
GO:0016319 P mushroom body development
GO:0016491 F oxidoreductase activity
GO:0016616 F oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0042048 P olfactory behavior
GO:0051287 F NAD binding
GO:0055114 P obsolete oxidation-reduction process
8642 O_BomoMSG1777_3prime_partial:A_BomoMSG_c8642_g1_i1
132bp
8643 O_BomoMSG17780_internal:A_BomoMSG_c25945_g1_i1
120bp
 phosphoglucomutase-2_[Bombyx_mori]
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0006006 P glucose metabolic process
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016853 F isomerase activity
GO:0016868 F intramolecular transferase activity, phosphotransferases
GO:0046872 F metal ion binding
GO:0047933 F glucose-1,6-bisphosphate synthase activity
GO:0071704 P organic substance metabolic process
8644 O_BomoMSG17781_3prime_partial:A_BomoMSG_c25945_g1_i2
605bp
 phosphoglucomutase-2_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0004614 F phosphoglucomutase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0005978 P glycogen biosynthetic process
GO:0005980 P glycogen catabolic process
GO:0006006 P glucose metabolic process
GO:0006098 P pentose-phosphate shunt
GO:0008973 F phosphopentomutase activity
GO:0016853 F isomerase activity
GO:0016868 F intramolecular transferase activity, phosphotransferases
GO:0019388 P galactose catabolic process
GO:0046386 P deoxyribose phosphate catabolic process
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
GO:0071704 P organic substance metabolic process
8645 O_BomoMSG17782_internal:A_BomoMSG_c25946_g3_i2
109bp
 hypothetical_protein_[Acinetobacter_baumannii]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
8646 O_BomoMSG17783_complete:A_BomoMSG_c25947_g1_i1
380bp
 transcription_initiation_factor_TFIID_subunit_7_[Bombyx_mori]
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0005669 C transcription factor TFIID complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0008134 F transcription factor binding
GO:0035035 F histone acetyltransferase binding
GO:0044212 F transcription cis-regulatory region binding
GO:0051123 P RNA polymerase II preinitiation complex assembly
8647 O_BomoMSG17784_complete:A_BomoMSG_c25948_g1_i1
498bp
 probable_ATP-dependent_RNA_helicase_DDX28_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0019843 F rRNA binding
GO:0035770 C ribonucleoprotein granule
GO:0042254 P ribosome biogenesis
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
GO:1902775 P mitochondrial large ribosomal subunit assembly
8648 O_BomoMSG17785_complete:A_BomoMSG_c25949_g1_i1
372bp
 calcium_release-activated_calcium_channel_protein_1_isoform_X2_[Bombyx_mori]
GO:0002115 P store-operated calcium entry
GO:0004252 F serine-type endopeptidase activity
GO:0005262 F calcium channel activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006508 P proteolysis
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0007399 P nervous system development
GO:0015279 F store-operated calcium channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
GO:0051928 P positive regulation of calcium ion transport
GO:0070588 P calcium ion transmembrane transport
GO:1903779 P regulation of cardiac conduction
8649 O_BomoMSG17786_complete:A_BomoMSG_c25949_g1_i2
372bp
 calcium_release-activated_calcium_channel_protein_1_isoform_X2_[Bombyx_mori]
GO:0002115 P store-operated calcium entry
GO:0004252 F serine-type endopeptidase activity
GO:0005262 F calcium channel activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006508 P proteolysis
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0007399 P nervous system development
GO:0015279 F store-operated calcium channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
GO:0051928 P positive regulation of calcium ion transport
GO:0070588 P calcium ion transmembrane transport
GO:1903779 P regulation of cardiac conduction
8650 O_BomoMSG17787_5prime_partial:A_BomoMSG_c25949_g1_i5
315bp
 calcium_release-activated_calcium_channel_protein_1_isoform_X1_[Bombyx_mori]
GO:0002115 P store-operated calcium entry
GO:0004252 F serine-type endopeptidase activity
GO:0005262 F calcium channel activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006508 P proteolysis
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0007399 P nervous system development
GO:0015279 F store-operated calcium channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
GO:0051928 P positive regulation of calcium ion transport
GO:0070588 P calcium ion transmembrane transport
GO:1903779 P regulation of cardiac conduction
8651 O_BomoMSG17788_5prime_partial:A_BomoMSG_c25950_g1_i2
115bp
 phosphatidylinositol_4-kinase_beta_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004430 F 1-phosphatidylinositol 4-kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0030867 C rough endoplasmic reticulum membrane
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0048015 P phosphatidylinositol-mediated signaling
8652 O_BomoMSG17789_complete:A_BomoMSG_c25950_g1_i3
817bp
 phosphatidylinositol_4-kinase_beta_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004430 F 1-phosphatidylinositol 4-kinase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005783 C endoplasmic reticulum
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0030867 C rough endoplasmic reticulum membrane
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0048015 P phosphatidylinositol-mediated signaling
8653 O_BomoMSG1778_internal:A_BomoMSG_c8653_g1_i1
220bp
 uncharacterized_protein_LOC101742045_isoform_X2_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0006099 P tricarboxylic acid cycle
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0030060 F L-malate dehydrogenase activity
GO:0055114 P obsolete oxidation-reduction process
8654 O_BomoMSG17790_complete:A_BomoMSG_c25950_g1_i3
115bp
8655 O_BomoMSG17791_complete:A_BomoMSG_c25950_g1_i3
102bp
8656 O_BomoMSG17792_complete:A_BomoMSG_c25951_g1_i1
326bp
 uncharacterized_protein_LOC101747121_[Bombyx_mori]
GO:0003713 F transcription coactivator activity
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0030914 C SAGA complex
GO:0043966 P histone H3 acetylation
GO:0051457 P maintenance of protein location in nucleus
8657 O_BomoMSG17793_5prime_partial:A_BomoMSG_c25952_g1_i1
182bp
 uncharacterized_protein_LOC101741715_[Bombyx_mori]
8658 O_BomoMSG17794_complete:A_BomoMSG_c25952_g1_i1
119bp
8659 O_BomoMSG17795_internal:A_BomoMSG_c25954_g1_i1
119bp
 2-methoxy-6-polyprenyl-1,4-benzoquinol_methylase,_mitochondrial_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006744 P ubiquinone biosynthetic process
GO:0008168 F methyltransferase activity
GO:0008757 F S-adenosylmethionine-dependent methyltransferase activity
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0043334 F 2-hexaprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
GO:0102005 F 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase activity
8660 O_BomoMSG17796_3prime_partial:A_BomoMSG_c25954_g1_i2
301bp
 2-methoxy-6-polyprenyl-1,4-benzoquinol_methylase,_mitochondrial_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006744 P ubiquinone biosynthetic process
GO:0008168 F methyltransferase activity
GO:0008757 F S-adenosylmethionine-dependent methyltransferase activity
GO:0016020 C membrane
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0043334 F 2-hexaprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
GO:0102005 F 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase activity
8661 O_BomoMSG17797_5prime_partial:A_BomoMSG_c25955_g1_i1
135bp
 transcription_initiation_factor_TFIID_subunit_7_[Bombyx_mori]
8662 O_BomoMSG17798_complete:A_BomoMSG_c25955_g1_i2
387bp
 transcription_initiation_factor_TFIID_subunit_7_[Bombyx_mori]
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0005669 C transcription factor TFIID complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0008134 F transcription factor binding
GO:0035035 F histone acetyltransferase binding
GO:0044212 F transcription cis-regulatory region binding
GO:0051123 P RNA polymerase II preinitiation complex assembly
8663 O_BomoMSG17799_complete:A_BomoMSG_c25955_g1_i2
106bp
8664 O_BomoMSG1779_internal:A_BomoMSG_c8654_g1_i1
130bp
8665 O_BomoMSG177_internal:A_BomoMSG_c719_g1_i1
263bp
 receptor_type_guanylyl_cyclase_[Bombyx_mori]
GO:0001501 P skeletal system development
GO:0002158 P osteoclast proliferation
GO:0004016 F adenylate cyclase activity
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007189 P adenylate cyclase-activating G protein-coupled receptor signaling pathway
GO:0007193 P adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway
GO:0007194 P negative regulation of adenylate cyclase activity
GO:0007200 P phospholipase C-activating G protein-coupled receptor signaling pathway
GO:0008217 P regulation of blood pressure
GO:0008528 F G protein-coupled peptide receptor activity
GO:0009190 P cyclic nucleotide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016941 F natriuretic peptide receptor activity
GO:0017046 F peptide hormone binding
GO:0019933 P cAMP-mediated signaling
GO:0030157 P pancreatic juice secretion
GO:0033688 P regulation of osteoblast proliferation
GO:0035810 P positive regulation of urine volume
GO:0042562 F hormone binding
GO:0042803 F protein homodimerization activity
GO:0048015 P phosphatidylinositol-mediated signaling
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0051000 P positive regulation of nitric-oxide synthase activity
GO:0070062 C extracellular exosome
8666 O_BomoMSG17800_internal:A_BomoMSG_c25956_g1_i2
191bp
 uncharacterized_protein_LOC101743192_[Bombyx_mori]
8667 O_BomoMSG17801_3prime_partial:A_BomoMSG_c25956_g1_i3
347bp
 uncharacterized_protein_LOC101743192_[Bombyx_mori]
8668 O_BomoMSG17802_5prime_partial:A_BomoMSG_c25957_g1_i1
446bp
 dynactin_subunit_1_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0001709 P cell fate determination
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0001754 P eye photoreceptor cell differentiation
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005813 C centrosome
GO:0005818 C aster
GO:0005828 C kinetochore microtubule
GO:0005856 C cytoskeleton
GO:0005869 C dynactin complex
GO:0005874 C microtubule
GO:0005876 C spindle microtubule
GO:0006886 P intracellular protein transport
GO:0007018 P microtubule-based movement
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007349 P cellularization
GO:0008090 P retrograde axonal transport
GO:0010970 P transport along microtubule
GO:0016330 P second mitotic wave involved in compound eye morphogenesis
GO:0022008 P neurogenesis
GO:0030286 C dynein complex
GO:0030496 C midbody
GO:0031616 C spindle pole centrosome
GO:0034501 P protein localization to kinetochore
GO:0035011 P melanotic encapsulation of foreign target
GO:0035371 C microtubule plus-end
GO:0042051 P compound eye photoreceptor development
GO:0042052 P rhabdomere development
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045502 F dynein complex binding
GO:0047497 P mitochondrion transport along microtubule
GO:0048477 P oogenesis
GO:0048491 P retrograde synaptic vesicle transport
GO:0048675 P axon extension
GO:0051028 P mRNA transport
GO:0051225 P spindle assembly
GO:0051256 P mitotic spindle midzone assembly
GO:0051299 P centrosome separation
GO:0051383 P kinetochore organization
GO:0051642 P centrosome localization
GO:0070840 F dynein complex binding
GO:1904115 C axon cytoplasm
8669 O_BomoMSG17803_complete:A_BomoMSG_c25957_g1_i1
136bp
8670 O_BomoMSG17804_complete:A_BomoMSG_c25957_g1_i1
100bp
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