Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
8671	O_BomoMSG17805_5prime_partial:A_BomoMSG_c25957_g1_i2 243bp	Bomo_Chr24	dynactin_subunit_1_[Bombyx_mori]
8672	O_BomoMSG17806_complete:A_BomoMSG_c25957_g1_i2 100bp	Bomo_Chr24
8673	O_BomoMSG17807_5prime_partial:A_BomoMSG_c25957_g1_i3 433bp	Bomo_Chr24	dynactin_subunit_1_[Bombyx_mori]	GO:0000776 C kinetochore GO:0001709 P cell fate determination GO:0001751 P compound eye photoreceptor cell differentiation GO:0001754 P eye photoreceptor cell differentiation GO:0003774 F cytoskeletal motor activity GO:0003777 F microtubule motor activity GO:0005737 C cytoplasm GO:0005739 C mitochondrion GO:0005813 C centrosome GO:0005818 C aster GO:0005828 C kinetochore microtubule GO:0005856 C cytoskeleton GO:0005869 C dynactin complex GO:0005874 C microtubule GO:0005876 C spindle microtubule GO:0006886 P intracellular protein transport GO:0007018 P microtubule-based movement GO:0007052 P mitotic spindle organization GO:0007067 P mitotic cell cycle GO:0007349 P cellularization GO:0008090 P retrograde axonal transport GO:0010970 P transport along microtubule GO:0016330 P second mitotic wave involved in compound eye morphogenesis GO:0022008 P neurogenesis GO:0030286 C dynein complex GO:0030496 C midbody GO:0031616 C spindle pole centrosome GO:0034501 P protein localization to kinetochore GO:0035011 P melanotic encapsulation of foreign target GO:0035371 C microtubule plus-end GO:0042051 P compound eye photoreceptor development GO:0042052 P rhabdomere development GO:0045198 P establishment of epithelial cell apical/basal polarity GO:0045502 F dynein complex binding GO:0047497 P mitochondrion transport along microtubule GO:0048477 P oogenesis GO:0048491 P retrograde synaptic vesicle transport GO:0048675 P axon extension GO:0051028 P mRNA transport GO:0051225 P spindle assembly GO:0051256 P mitotic spindle midzone assembly GO:0051299 P centrosome separation GO:0051383 P kinetochore organization GO:0051642 P centrosome localization GO:0070840 F dynein complex binding GO:1904115 C axon cytoplasm
8674	O_BomoMSG17808_complete:A_BomoMSG_c25957_g1_i3 136bp	Bomo_Chr24
8675	O_BomoMSG17809_complete:A_BomoMSG_c25957_g1_i3 100bp	Bomo_Chr24
8676	O_BomoMSG1780_internal:A_BomoMSG_c8654_g1_i1 130bp	Bomo_Chr22	DNA_N6-methyl_adenine_demethylase_isoform_X2_[Bombyx_mori]	GO:0003677 F DNA binding GO:0005634 C nucleus GO:0007281 P germ cell development GO:0008270 F zinc ion binding GO:0016491 F oxidoreductase activity GO:0035511 P oxidative DNA demethylation GO:0035514 F DNA demethylase activity GO:0035516 F oxidative DNA demethylase activity GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0046872 F metal ion binding GO:0051213 F dioxygenase activity GO:0055114 P obsolete oxidation-reduction process GO:1901537 P positive regulation of DNA demethylation
8677	O_BomoMSG17810_internal:A_BomoMSG_c25958_g1_i1 249bp	Bomo_Chr11	uncharacterized_protein_LOC110370110_isoform_X3_[Helicoverpa_armigera]
8678	O_BomoMSG17811_internal:A_BomoMSG_c25958_g1_i2 138bp	Bomo_Chr11	uncharacterized_protein_LOC110386381_[Bombyx_mori]
8679	O_BomoMSG17812_3prime_partial:A_BomoMSG_c25958_g1_i3 286bp	Bomo_Chr11	uncharacterized_protein_LOC110370110_isoform_X3_[Helicoverpa_armigera]
8680	O_BomoMSG17813_3prime_partial:A_BomoMSG_c25958_g1_i4 286bp	Bomo_Chr11	uncharacterized_protein_LOC110370110_isoform_X3_[Helicoverpa_armigera]
8681	O_BomoMSG17814_complete:A_BomoMSG_c25959_g1_i1 412bp	Bomo_Chr9	protein_roadkill_isoform_X2_[Bombyx_mori]	GO:0001654 P eye development GO:0005515 F protein binding GO:0005634 C nucleus GO:0007275 P multicellular organism development GO:0007349 P cellularization GO:0007367 P segment polarity determination GO:0016567 P protein ubiquitination GO:0030162 P regulation of proteolysis GO:0031648 P protein destabilization GO:0042067 P establishment of ommatidial planar polarity GO:0042308 P negative regulation of protein import into nucleus GO:0042803 F protein homodimerization activity GO:0043065 P positive regulation of apoptotic process GO:0045879 P negative regulation of smoothened signaling pathway GO:0046330 P positive regulation of JNK cascade GO:0046331 P lateral inhibition GO:0048592 P eye morphogenesis
8682	O_BomoMSG17815_complete:A_BomoMSG_c25959_g1_i1 120bp	Bomo_Chr9
8683	O_BomoMSG17816_5prime_partial:A_BomoMSG_c25959_g1_i1 116bp	Bomo_Chr9
8684	O_BomoMSG17817_5prime_partial:A_BomoMSG_c25959_g1_i2 181bp	Bomo_Chr9	protein_roadkill_isoform_X3_[Bombyx_mori]	GO:0001654 P eye development GO:0005515 F protein binding GO:0005634 C nucleus GO:0007275 P multicellular organism development GO:0007349 P cellularization GO:0007367 P segment polarity determination GO:0016567 P protein ubiquitination GO:0030162 P regulation of proteolysis GO:0031648 P protein destabilization GO:0042067 P establishment of ommatidial planar polarity GO:0042308 P negative regulation of protein import into nucleus GO:0042803 F protein homodimerization activity GO:0043065 P positive regulation of apoptotic process GO:0045879 P negative regulation of smoothened signaling pathway GO:0046330 P positive regulation of JNK cascade GO:0046331 P lateral inhibition GO:0048592 P eye morphogenesis
8685	O_BomoMSG17818_complete:A_BomoMSG_c25959_g1_i2 120bp	Bomo_Chr9
8686	O_BomoMSG17819_5prime_partial:A_BomoMSG_c25959_g1_i2 116bp	Bomo_Chr9
8687	O_BomoMSG1781_internal:A_BomoMSG_c8655_g1_i1 108bp	Bomo_Chr14	RIB43A-like_with_coiled-coils_protein_2_[Bombyx_mori]
8688	O_BomoMSG17820_complete:A_BomoMSG_c25959_g1_i3 377bp	Bomo_Chr9	protein_roadkill_isoform_X2_[Helicoverpa_armigera]	GO:0001654 P eye development GO:0005515 F protein binding GO:0005634 C nucleus GO:0007275 P multicellular organism development GO:0007349 P cellularization GO:0007367 P segment polarity determination GO:0016567 P protein ubiquitination GO:0030162 P regulation of proteolysis GO:0031648 P protein destabilization GO:0042067 P establishment of ommatidial planar polarity GO:0042308 P negative regulation of protein import into nucleus GO:0042803 F protein homodimerization activity GO:0043065 P positive regulation of apoptotic process GO:0045879 P negative regulation of smoothened signaling pathway GO:0046330 P positive regulation of JNK cascade GO:0046331 P lateral inhibition GO:0048592 P eye morphogenesis
8689	O_BomoMSG17821_complete:A_BomoMSG_c25959_g1_i3 120bp	Bomo_Chr9
8690	O_BomoMSG17822_5prime_partial:A_BomoMSG_c25959_g1_i3 116bp	Bomo_Chr9
8691	O_BomoMSG17823_complete:A_BomoMSG_c25959_g1_i4 424bp	Bomo_Chr9	speckle-type_POZ_protein_isoform_X1_[Bombyx_mori]	GO:0001654 P eye development GO:0005515 F protein binding GO:0005634 C nucleus GO:0007275 P multicellular organism development GO:0007349 P cellularization GO:0007367 P segment polarity determination GO:0016567 P protein ubiquitination GO:0030162 P regulation of proteolysis GO:0031648 P protein destabilization GO:0042067 P establishment of ommatidial planar polarity GO:0042308 P negative regulation of protein import into nucleus GO:0042803 F protein homodimerization activity GO:0043065 P positive regulation of apoptotic process GO:0045879 P negative regulation of smoothened signaling pathway GO:0046330 P positive regulation of JNK cascade GO:0046331 P lateral inhibition GO:0048592 P eye morphogenesis
8692	O_BomoMSG17824_complete:A_BomoMSG_c25959_g1_i4 120bp	Bomo_Chr9
8693	O_BomoMSG17825_5prime_partial:A_BomoMSG_c25959_g1_i4 116bp	Bomo_Chr9
8694	O_BomoMSG17826_internal:A_BomoMSG_c25960_g1_i1 426bp	Bomo_Chr25	putative_epidermal_cell_surface_receptor_[Bombyx_mori]	GO:0002168 P instar larval development GO:0004872 F signaling receptor activity GO:0005887 C integral component of plasma membrane GO:0007275 P multicellular organism development GO:0007411 P axon guidance GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016324 C apical plasma membrane
8695	O_BomoMSG17827_5prime_partial:A_BomoMSG_c25960_g1_i1 111bp	Bomo_Chr25
8696	O_BomoMSG17828_internal:A_BomoMSG_c25960_g1_i2 290bp	Bomo_Chr25	putative_epidermal_cell_surface_receptor_[Bombyx_mori]	GO:0002168 P instar larval development GO:0004872 F signaling receptor activity GO:0005887 C integral component of plasma membrane GO:0007275 P multicellular organism development GO:0007411 P axon guidance GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016324 C apical plasma membrane
8697	O_BomoMSG17829_5prime_partial:A_BomoMSG_c25960_g1_i2 111bp	Bomo_Chr25
8698	O_BomoMSG1782_5prime_partial:A_BomoMSG_c8655_g1_i1 108bp	Bomo_Chr14
8699	O_BomoMSG17830_3prime_partial:A_BomoMSG_c25960_g1_i3 518bp	Bomo_Chr25	putative_epidermal_cell_surface_receptor_[Bombyx_mori]	GO:0002168 P instar larval development GO:0004872 F signaling receptor activity GO:0005887 C integral component of plasma membrane GO:0007275 P multicellular organism development GO:0007411 P axon guidance GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016324 C apical plasma membrane
8700	O_BomoMSG17831_5prime_partial:A_BomoMSG_c25960_g1_i3 111bp	Bomo_Chr25