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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8551 O_BomoMSG17698_internal:A_BomoMSG_c25919_g1_i1
772bp
 trimethylguanosine_synthase_[Bombyx_mori]
GO:0001510 P RNA methylation
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0009452 P 7-methylguanosine RNA capping
GO:0015030 C Cajal body
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0036261 P 7-methylguanosine cap hypermethylation
GO:0071164 F RNA trimethylguanosine synthase activity
8552 O_BomoMSG17699_internal:A_BomoMSG_c25919_g1_i2
179bp
 trimethylguanosine_synthase_[Bombyx_mori]
GO:0001510 P RNA methylation
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0009452 P 7-methylguanosine RNA capping
GO:0015030 C Cajal body
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0036261 P 7-methylguanosine cap hypermethylation
GO:0071164 F RNA trimethylguanosine synthase activity
8553 O_BomoMSG1769_internal:A_BomoMSG_c8597_g1_i1
116bp
 LOW_QUALITY_PROTEIN:_chondroitin_sulfate_proteoglycan_4_[Bombyx_mori]
GO:0000187 P obsolete activation of MAPK activity
GO:0001525 P angiogenesis
GO:0004871 F obsolete signal transducer activity
GO:0005576 C extracellular region
GO:0005796 C Golgi lumen
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005925 C focal adhesion
GO:0007165 P signal transduction
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0008283 P cell population proliferation
GO:0008347 P glial cell migration
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0016477 P cell migration
GO:0019901 F protein kinase binding
GO:0030154 P cell differentiation
GO:0030203 P glycosaminoglycan metabolic process
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0030207 P chondroitin sulfate catabolic process
GO:0030208 P dermatan sulfate biosynthetic process
GO:0031258 C lamellipodium membrane
GO:0035556 P intracellular signal transduction
GO:0042995 C cell projection
GO:0043202 C lysosomal lumen
GO:0048771 P tissue remodeling
GO:0050731 P positive regulation of peptidyl-tyrosine phosphorylation
GO:0070062 C extracellular exosome
8554 O_BomoMSG176_internal:A_BomoMSG_c716_g1_i1
112bp
 TELO2-interacting_protein_2-like_[Bombyx_mori]
8555 O_BomoMSG17700_complete:A_BomoMSG_c25921_g2_i1
185bp
 ring_finger_protein_5_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006914 P autophagy
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0036503 P ERAD pathway
GO:0036513 C Derlin-1 retrotranslocation complex
GO:0044390 F ubiquitin-like protein conjugating enzyme binding
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
GO:1904264 F ubiquitin protein ligase activity
8556 O_BomoMSG17701_5prime_partial:A_BomoMSG_c25923_g1_i2
100bp
 uncharacterized_protein_LOC101743046_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005794 C Golgi apparatus
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
8557 O_BomoMSG17702_5prime_partial:A_BomoMSG_c25923_g1_i4
125bp
 uncharacterized_protein_LOC101743046_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005794 C Golgi apparatus
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
8558 O_BomoMSG17703_5prime_partial:A_BomoMSG_c25923_g1_i5
344bp
 uncharacterized_protein_LOC101743046_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
8559 O_BomoMSG17704_5prime_partial:A_BomoMSG_c25924_g1_i1
185bp
 exocyst_complex_component_6_[Bombyx_mori]
GO:0000145 C exocyst
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0006904 P vesicle docking involved in exocytosis
GO:0015031 P protein transport
8560 O_BomoMSG17705_complete:A_BomoMSG_c25924_g1_i1
104bp
8561 O_BomoMSG17706_5prime_partial:A_BomoMSG_c25924_g1_i1
103bp
8562 O_BomoMSG17707_complete:A_BomoMSG_c25924_g1_i2
757bp
 exocyst_complex_component_6_[Bombyx_mori]
GO:0000145 C exocyst
GO:0005768 C endosome
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0006904 P vesicle docking involved in exocytosis
GO:0007269 P neurotransmitter secretion
GO:0007298 P border follicle cell migration
GO:0007411 P axon guidance
GO:0015031 P protein transport
GO:0016080 P synaptic vesicle targeting
GO:0016081 P synaptic vesicle docking
GO:0016192 P vesicle-mediated transport
GO:0017137 F small GTPase binding
GO:0022416 P chaeta development
GO:0031410 C cytoplasmic vesicle
GO:0032456 P endocytic recycling
GO:0042331 P phototaxis
GO:0043679 C axon terminus
GO:0055037 C recycling endosome
GO:0072659 P protein localization to plasma membrane
GO:0090522 P vesicle tethering involved in exocytosis
GO:0098793 C presynapse
8563 O_BomoMSG17708_complete:A_BomoMSG_c25924_g1_i2
120bp
8564 O_BomoMSG17709_complete:A_BomoMSG_c25924_g1_i2
104bp
8565 O_BomoMSG1770_internal:A_BomoMSG_c8606_g1_i1
116bp
8566 O_BomoMSG17710_complete:A_BomoMSG_c25924_g1_i2
100bp
8567 O_BomoMSG17711_5prime_partial:A_BomoMSG_c25924_g1_i3
211bp
 exocyst_complex_component_6_[Bombyx_mori]
GO:0000145 C exocyst
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0006904 P vesicle docking involved in exocytosis
GO:0015031 P protein transport
8568 O_BomoMSG17712_complete:A_BomoMSG_c25924_g1_i3
104bp
8569 O_BomoMSG17713_5prime_partial:A_BomoMSG_c25924_g1_i4
417bp
 exocyst_complex_component_6_[Bombyx_mori]
GO:0000145 C exocyst
GO:0005768 C endosome
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0006904 P vesicle docking involved in exocytosis
GO:0007269 P neurotransmitter secretion
GO:0007298 P border follicle cell migration
GO:0007411 P axon guidance
GO:0015031 P protein transport
GO:0016080 P synaptic vesicle targeting
GO:0016081 P synaptic vesicle docking
GO:0016192 P vesicle-mediated transport
GO:0017137 F small GTPase binding
GO:0022416 P chaeta development
GO:0031410 C cytoplasmic vesicle
GO:0032456 P endocytic recycling
GO:0042331 P phototaxis
GO:0043679 C axon terminus
GO:0055037 C recycling endosome
GO:0072659 P protein localization to plasma membrane
GO:0090522 P vesicle tethering involved in exocytosis
GO:0098793 C presynapse
8570 O_BomoMSG17714_complete:A_BomoMSG_c25924_g1_i4
120bp
8571 O_BomoMSG17715_complete:A_BomoMSG_c25924_g1_i4
104bp
8572 O_BomoMSG17716_internal:A_BomoMSG_c25926_g1_i1
450bp
 protein_unc-13_homolog_4B_isoform_X1_[Bombyx_mori]
GO:0002432 P granuloma formation
GO:0002467 P germinal center formation
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0006887 P exocytosis
GO:0006909 P phagocytosis
GO:0016020 C membrane
GO:0017137 F small GTPase binding
GO:0033093 C Weibel-Palade body
GO:0043304 P regulation of mast cell degranulation
GO:0043320 P natural killer cell degranulation
GO:0045921 P positive regulation of exocytosis
GO:0051607 P defense response to virus
GO:0055037 C recycling endosome
GO:0070382 C exocytic vesicle
GO:1900026 P positive regulation of substrate adhesion-dependent cell spreading
GO:1903307 P positive regulation of regulated secretory pathway
8573 O_BomoMSG17717_5prime_partial:A_BomoMSG_c25927_g1_i1
154bp
8574 O_BomoMSG17718_5prime_partial:A_BomoMSG_c25927_g1_i1
147bp
 solute_carrier_family_22_member_3_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0055085 P transmembrane transport
8575 O_BomoMSG17719_5prime_partial:A_BomoMSG_c25927_g1_i2
193bp
8576 O_BomoMSG1771_internal:A_BomoMSG_c8627_g1_i1
116bp
 apolipophorins_isoform_X2_[Bombyx_mori]
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0016055 P Wnt signaling pathway
8577 O_BomoMSG17720_5prime_partial:A_BomoMSG_c25927_g1_i2
186bp
 solute_carrier_family_22_member_3_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0055085 P transmembrane transport
8578 O_BomoMSG17721_5prime_partial:A_BomoMSG_c25927_g1_i3
382bp
 solute_carrier_family_22_member_3_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005329 F dopamine:sodium symporter activity
GO:0005515 F protein binding
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015101 F organic cation transmembrane transporter activity
GO:0015651 F quaternary ammonium group transmembrane transporter activity
GO:0015695 P organic cation transport
GO:0015697 P quaternary ammonium group transport
GO:0015844 P monoamine transport
GO:0015872 P dopamine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019534 F toxin transmembrane transporter activity
GO:0022857 F transmembrane transporter activity
GO:0032098 P regulation of appetite
GO:0051608 P histamine transport
GO:0051615 P histamine uptake
GO:0055085 P transmembrane transport
GO:0072488 P ammonium transmembrane transport
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:1901998 P toxin transport
8579 O_BomoMSG17722_5prime_partial:A_BomoMSG_c25928_g1_i1
180bp
 5-formyltetrahydrofolate_cyclo-ligase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005542 F folic acid binding
GO:0005737 C cytoplasm
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0006536 P glutamate metabolic process
GO:0009396 P folic acid-containing compound biosynthetic process
GO:0015942 P formate metabolic process
GO:0016874 F ligase activity
GO:0030272 F 5-formyltetrahydrofolate cyclo-ligase activity
GO:0035999 P tetrahydrofolate interconversion
GO:0046653 P tetrahydrofolate metabolic process
GO:0046655 P folic acid metabolic process
GO:0046657 P folic acid catabolic process
GO:0046872 F metal ion binding
8580 O_BomoMSG17723_complete:A_BomoMSG_c25928_g1_i2
197bp
 5-formyltetrahydrofolate_cyclo-ligase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005542 F folic acid binding
GO:0005737 C cytoplasm
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0006536 P glutamate metabolic process
GO:0009396 P folic acid-containing compound biosynthetic process
GO:0015942 P formate metabolic process
GO:0016874 F ligase activity
GO:0030272 F 5-formyltetrahydrofolate cyclo-ligase activity
GO:0035999 P tetrahydrofolate interconversion
GO:0046653 P tetrahydrofolate metabolic process
GO:0046655 P folic acid metabolic process
GO:0046657 P folic acid catabolic process
GO:0046872 F metal ion binding
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