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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8521 O_BomoMSG17670_5prime_partial:A_BomoMSG_c25916_g1_i2
229bp
 uncharacterized_protein_LOC101744110_isoform_X6_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
8522 O_BomoMSG17671_complete:A_BomoMSG_c25916_g1_i2
117bp
8523 O_BomoMSG17672_complete:A_BomoMSG_c25916_g1_i3
557bp
 uncharacterized_protein_LOC101744110_isoform_X9_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
8524 O_BomoMSG17673_complete:A_BomoMSG_c25916_g1_i3
117bp
8525 O_BomoMSG17674_5prime_partial:A_BomoMSG_c25916_g1_i4
356bp
 uncharacterized_protein_LOC101744110_isoform_X6_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
8526 O_BomoMSG17675_complete:A_BomoMSG_c25916_g1_i4
117bp
8527 O_BomoMSG17676_5prime_partial:A_BomoMSG_c25916_g1_i5
382bp
 uncharacterized_protein_LOC101744110_isoform_X6_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
8528 O_BomoMSG17677_complete:A_BomoMSG_c25916_g1_i5
117bp
8529 O_BomoMSG17678_5prime_partial:A_BomoMSG_c25916_g1_i6
561bp
 uncharacterized_protein_LOC101744110_isoform_X10_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
8530 O_BomoMSG17679_complete:A_BomoMSG_c25916_g1_i6
117bp
8531 O_BomoMSG1767_internal:A_BomoMSG_c8586_g1_i1
125bp
 uncharacterized_protein_LOC101743871_[Bombyx_mori]
8532 O_BomoMSG17680_complete:A_BomoMSG_c25917_g1_i1
272bp
 palmitoyltransferase_ZDHHC23_[Helicoverpa_armigera]
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0018345 P protein palmitoylation
GO:0019706 F protein-cysteine S-palmitoyltransferase activity
GO:0046872 F metal ion binding
GO:0072659 P protein localization to plasma membrane
8533 O_BomoMSG17681_complete:A_BomoMSG_c25917_g1_i2
272bp
 palmitoyltransferase_ZDHHC23_[Helicoverpa_armigera]
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0018345 P protein palmitoylation
GO:0019706 F protein-cysteine S-palmitoyltransferase activity
GO:0046872 F metal ion binding
GO:0072659 P protein localization to plasma membrane
8534 O_BomoMSG17682_complete:A_BomoMSG_c25917_g1_i4
165bp
 palmitoyltransferase_ZDHHC23_[Helicoverpa_armigera]
8535 O_BomoMSG17683_complete:A_BomoMSG_c25917_g5_i1
499bp
 alpha-1,6-mannosyl-glycoprotein_2-beta-N-acetylglucosaminyltransferase_isoform_X2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0006486 P protein glycosylation
GO:0006487 P protein N-linked glycosylation
GO:0008455 F alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity
GO:0009312 P oligosaccharide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0018279 P protein N-linked glycosylation via asparagine
GO:0030246 F carbohydrate binding
8536 O_BomoMSG17684_complete:A_BomoMSG_c25917_g5_i1
131bp
8537 O_BomoMSG17685_complete:A_BomoMSG_c25917_g5_i1
111bp
8538 O_BomoMSG17686_5prime_partial:A_BomoMSG_c25917_g5_i2
450bp
 alpha-1,6-mannosyl-glycoprotein_2-beta-N-acetylglucosaminyltransferase_isoform_X3_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0006486 P protein glycosylation
GO:0006487 P protein N-linked glycosylation
GO:0008455 F alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity
GO:0009312 P oligosaccharide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0018279 P protein N-linked glycosylation via asparagine
GO:0030246 F carbohydrate binding
8539 O_BomoMSG17687_complete:A_BomoMSG_c25917_g5_i3
457bp
 alpha-1,6-mannosyl-glycoprotein_2-beta-N-acetylglucosaminyltransferase_isoform_X3_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0006486 P protein glycosylation
GO:0006487 P protein N-linked glycosylation
GO:0008455 F alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity
GO:0009312 P oligosaccharide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0018279 P protein N-linked glycosylation via asparagine
GO:0030246 F carbohydrate binding
8540 O_BomoMSG17688_complete:A_BomoMSG_c25917_g5_i3
111bp
8541 O_BomoMSG17689_complete:A_BomoMSG_c25917_g5_i4
457bp
 alpha-1,6-mannosyl-glycoprotein_2-beta-N-acetylglucosaminyltransferase_isoform_X3_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0006486 P protein glycosylation
GO:0006487 P protein N-linked glycosylation
GO:0008455 F alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity
GO:0009312 P oligosaccharide biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0018279 P protein N-linked glycosylation via asparagine
GO:0030246 F carbohydrate binding
8542 O_BomoMSG1768_5prime_partial:A_BomoMSG_c8587_g1_i1
105bp
 S-adenosylmethionine_mitochondrial_carrier_protein_[Bombyx_mori]
GO:0000095 F S-adenosyl-L-methionine transmembrane transporter activity
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0006810 P transport
GO:0006839 P mitochondrial transport
GO:0015805 P S-adenosyl-L-methionine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0031966 C mitochondrial membrane
GO:0055085 P transmembrane transport
GO:1901962 P S-adenosyl-L-methionine transmembrane transport
8543 O_BomoMSG17690_complete:A_BomoMSG_c25917_g5_i4
111bp
8544 O_BomoMSG17691_3prime_partial:A_BomoMSG_c25918_g2_i1
434bp
 zinc_finger_protein_845_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
8545 O_BomoMSG17692_complete:A_BomoMSG_c25918_g2_i1
230bp
8546 O_BomoMSG17693_5prime_partial:A_BomoMSG_c25918_g2_i1
132bp
8547 O_BomoMSG17694_3prime_partial:A_BomoMSG_c25918_g2_i1
125bp
8548 O_BomoMSG17695_3prime_partial:A_BomoMSG_c25918_g2_i2
397bp
 zinc_finger_protein_845_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
8549 O_BomoMSG17696_5prime_partial:A_BomoMSG_c25918_g2_i2
132bp
8550 O_BomoMSG17697_3prime_partial:A_BomoMSG_c25918_g2_i2
125bp
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