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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8491 O_BomoMSG17643_5prime_partial:A_BomoMSG_c25898_g1_i2
297bp
 LOW_QUALITY_PROTEIN:_zinc_finger_protein_Noc_[Bombyx_mori]
GO:0001752 P compound eye photoreceptor fate commitment
GO:0002121 P inter-male aggressive behavior
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007420 P brain development
GO:0007424 P open tracheal system development
GO:0007430 P terminal branching, open tracheal system
GO:0008056 P ocellus development
GO:0008283 P cell population proliferation
GO:0010629 P negative regulation of gene expression
GO:0035214 P eye-antennal disc development
GO:0035218 P leg disc development
GO:0035220 P wing disc development
GO:0046872 F metal ion binding
8492 O_BomoMSG17644_internal:A_BomoMSG_c25901_g1_i1
175bp
 uncharacterized_protein_LOC101739268_[Bombyx_mori]
8493 O_BomoMSG17645_5prime_partial:A_BomoMSG_c25902_g1_i1
674bp
 uncharacterized_protein_LOC101743721_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005575 C cellular_component
GO:0006260 P DNA replication
GO:0006275 P regulation of DNA replication
GO:0007275 P multicellular organism development
GO:0007304 P chorion-containing eggshell formation
GO:0007306 P eggshell chorion assembly
GO:0007307 P eggshell chorion gene amplification
GO:0008270 F zinc ion binding
GO:0030295 F protein kinase activator activity
GO:0031431 C Dbf4-dependent protein kinase complex
GO:0032147 P activation of protein kinase activity
GO:0045740 P positive regulation of DNA replication
GO:0045860 P positive regulation of protein kinase activity
GO:0046716 P muscle cell cellular homeostasis
GO:0046872 F metal ion binding
GO:0072499 P photoreceptor cell axon guidance
8494 O_BomoMSG17646_5prime_partial:A_BomoMSG_c25902_g1_i1
245bp
8495 O_BomoMSG17647_5prime_partial:A_BomoMSG_c25902_g1_i2
291bp
 uncharacterized_protein_LOC101743721_isoform_X2_[Bombyx_mori]
8496 O_BomoMSG17648_5prime_partial:A_BomoMSG_c25902_g1_i2
245bp
8497 O_BomoMSG17649_5prime_partial:A_BomoMSG_c25902_g1_i3
509bp
 uncharacterized_protein_LOC101743721_isoform_X2_[Bombyx_mori]
8498 O_BomoMSG1764_5prime_partial:A_BomoMSG_c8571_g1_i1
135bp
8499 O_BomoMSG17650_5prime_partial:A_BomoMSG_c25902_g1_i3
245bp
8500 O_BomoMSG17651_complete:A_BomoMSG_c25903_g1_i1
360bp
 uncharacterized_protein_LOC101743619_[Bombyx_mori]
GO:0001054 F RNA polymerase I activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005736 C RNA polymerase I complex
GO:0006351 P transcription, DNA-templated
GO:0006360 P transcription by RNA polymerase I
8501 O_BomoMSG17652_complete:A_BomoMSG_c25905_g1_i2
420bp
 zinc_finger_protein_Elbow_[Bombyx_mori]
GO:0000228 C nuclear chromosome
GO:0001752 P compound eye photoreceptor fate commitment
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007424 P open tracheal system development
GO:0008283 P cell population proliferation
GO:0010629 P negative regulation of gene expression
GO:0035214 P eye-antennal disc development
GO:0035218 P leg disc development
GO:0035220 P wing disc development
GO:0046872 F metal ion binding
GO:0048737 P imaginal disc-derived appendage development
8502 O_BomoMSG17653_complete:A_BomoMSG_c25905_g1_i2
164bp
8503 O_BomoMSG17654_internal:A_BomoMSG_c25909_g1_i1
367bp
 probable_ATP-dependent_RNA_helicase_DHX34_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006396 P RNA processing
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:2000623 P negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
8504 O_BomoMSG17655_3prime_partial:A_BomoMSG_c25909_g1_i2
421bp
 probable_ATP-dependent_RNA_helicase_DHX34_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006396 P RNA processing
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:2000623 P negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
8505 O_BomoMSG17656_internal:A_BomoMSG_c25909_g1_i3
222bp
 probable_ATP-dependent_RNA_helicase_DHX34_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006396 P RNA processing
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:2000623 P negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
8506 O_BomoMSG17657_internal:A_BomoMSG_c25909_g1_i4
581bp
 probable_ATP-dependent_RNA_helicase_DHX34_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006396 P RNA processing
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:2000623 P negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
8507 O_BomoMSG17658_3prime_partial:A_BomoMSG_c25909_g1_i4
128bp
8508 O_BomoMSG17659_internal:A_BomoMSG_c25909_g1_i5
342bp
 probable_ATP-dependent_RNA_helicase_DHX34_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0006396 P RNA processing
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:2000623 P negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
8509 O_BomoMSG1765_5prime_partial:A_BomoMSG_c8573_g1_i1
125bp
 protein_spaetzle_5_[Bombyx_mori]
GO:0000578 P embryonic axis specification
GO:0005121 F Toll binding
GO:0005125 F cytokine activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006952 P defense response
GO:0006955 P immune response
GO:0006965 P positive regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria
GO:0006967 P positive regulation of antifungal peptide biosynthetic process
GO:0007275 P multicellular organism development
GO:0007310 P oocyte dorsal/ventral axis specification
GO:0007311 P maternal specification of dorsal/ventral axis, oocyte, germ-line encoded
GO:0008045 P motor neuron axon guidance
GO:0008063 P Toll signaling pathway
GO:0008083 F growth factor activity
GO:0008592 P regulation of Toll signaling pathway
GO:0009620 P response to fungus
GO:0009950 P dorsal/ventral axis specification
GO:0009953 P dorsal/ventral pattern formation
GO:0016015 F morphogen activity
GO:0019732 P antifungal humoral response
GO:0031334 P positive regulation of protein-containing complex assembly
GO:0031640 P killing of cells of another organism
GO:0042803 F protein homodimerization activity
GO:0043234 C protein-containing complex
GO:0045087 P innate immune response
GO:0050830 P defense response to Gram-positive bacterium
GO:0050832 P defense response to fungus
8510 O_BomoMSG17660_complete:A_BomoMSG_c25910_g1_i1
166bp
 uncharacterized_protein_LOC101738609_isoform_X1_[Bombyx_mori]
8511 O_BomoMSG17661_complete:A_BomoMSG_c25911_g2_i1
621bp
 peroxidase_[Bombyx_mori]
GO:0004601 F peroxidase activity
GO:0005506 F iron ion binding
GO:0005576 C extracellular region
GO:0006909 P phagocytosis
GO:0006979 P response to oxidative stress
GO:0007306 P eggshell chorion assembly
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0022008 P neurogenesis
GO:0042600 C egg chorion
GO:0042744 P hydrogen peroxide catabolic process
GO:0045471 P response to ethanol
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
8512 O_BomoMSG17662_complete:A_BomoMSG_c25911_g2_i2
621bp
 peroxidase_[Bombyx_mori]
GO:0004601 F peroxidase activity
GO:0005506 F iron ion binding
GO:0005576 C extracellular region
GO:0006909 P phagocytosis
GO:0006979 P response to oxidative stress
GO:0007306 P eggshell chorion assembly
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0022008 P neurogenesis
GO:0042600 C egg chorion
GO:0042744 P hydrogen peroxide catabolic process
GO:0045471 P response to ethanol
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
8513 O_BomoMSG17663_5prime_partial:A_BomoMSG_c25912_g1_i1
224bp
 protein_maelstrom_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0030154 P cell differentiation
GO:0030718 P germ-line stem cell population maintenance
GO:0031047 P gene silencing by RNA
GO:0034587 P piRNA metabolic process
GO:0043186 C P granule
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0048471 C perinuclear region of cytoplasm
GO:0048477 P oogenesis
GO:0051321 P meiotic cell cycle
GO:0060964 P regulation of gene silencing by miRNA
8514 O_BomoMSG17664_5prime_partial:A_BomoMSG_c25912_g1_i2
195bp
 protein_maelstrom_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0030154 P cell differentiation
GO:0030718 P germ-line stem cell population maintenance
GO:0031047 P gene silencing by RNA
GO:0034587 P piRNA metabolic process
GO:0043186 C P granule
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0048471 C perinuclear region of cytoplasm
GO:0048477 P oogenesis
GO:0051321 P meiotic cell cycle
GO:0060964 P regulation of gene silencing by miRNA
8515 O_BomoMSG17665_5prime_partial:A_BomoMSG_c25912_g1_i3
359bp
 protein_maelstrom_homolog_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0030154 P cell differentiation
GO:0031047 P gene silencing by RNA
GO:0051321 P meiotic cell cycle
8516 O_BomoMSG17666_internal:A_BomoMSG_c25913_g1_i1
107bp
 gastrula_zinc_finger_protein_XlCGF57.1-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
8517 O_BomoMSG17667_3prime_partial:A_BomoMSG_c25913_g1_i2
379bp
 gastrula_zinc_finger_protein_XlCGF57.1-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0033674 P positive regulation of kinase activity
GO:0043066 P negative regulation of apoptotic process
GO:0045648 P positive regulation of erythrocyte differentiation
GO:0045654 P positive regulation of megakaryocyte differentiation
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0051781 P positive regulation of cell division
GO:0072707 P cellular response to sodium dodecyl sulfate
GO:1901989 P positive regulation of cell cycle phase transition
8518 O_BomoMSG17668_5prime_partial:A_BomoMSG_c25915_g1_i1
293bp
 CDT1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0007049 P cell cycle
8519 O_BomoMSG17669_5prime_partial:A_BomoMSG_c25916_g1_i1
462bp
 uncharacterized_protein_LOC101744110_isoform_X10_[Bombyx_mori]
8520 O_BomoMSG1766_internal:A_BomoMSG_c8582_g1_i1
145bp
 PREDICTED:_uncharacterized_protein_LOC105387464_[Plutella_xylostella]
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