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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8461 O_BomoMSG17616_3prime_partial:A_BomoMSG_c25886_g3_i1
143bp
8462 O_BomoMSG17617_3prime_partial:A_BomoMSG_c25886_g2_i2
110bp
 LOW_QUALITY_PROTEIN:_facilitated_trehalose_transporter_Tret1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015767 P lactose transport
GO:0015768 P maltose transport
GO:0015770 P sucrose transport
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
8463 O_BomoMSG17618_complete:A_BomoMSG_c25886_g2_i3
493bp
 facilitated_trehalose_transporter_Tret1-like_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
8464 O_BomoMSG17619_complete:A_BomoMSG_c25886_g3_i2
514bp
 LOW_QUALITY_PROTEIN:_facilitated_trehalose_transporter_Tret1-2_homolog_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
8465 O_BomoMSG1761_5prime_partial:A_BomoMSG_c8568_g1_i1
148bp
 ATP-binding_cassette_sub-family_G_member_1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005543 F phospholipid binding
GO:0005548 F phospholipid transporter activity
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008203 P cholesterol metabolic process
GO:0009720 P detection of hormone stimulus
GO:0009897 C external side of plasma membrane
GO:0010033 P response to organic substance
GO:0010745 P negative regulation of macrophage derived foam cell differentiation
GO:0010872 P regulation of cholesterol esterification
GO:0010875 P positive regulation of cholesterol efflux
GO:0010887 P negative regulation of cholesterol storage
GO:0010888 P negative regulation of lipid storage
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0019534 F toxin transmembrane transporter activity
GO:0030301 P cholesterol transport
GO:0032367 P intracellular cholesterol transport
GO:0033344 P cholesterol efflux
GO:0033700 P phospholipid efflux
GO:0033993 P response to lipid
GO:0034041 F ABC-type sterol transporter activity
GO:0034374 P low-density lipoprotein particle remodeling
GO:0034375 P high-density lipoprotein particle remodeling
GO:0034436 P glycoprotein transport
GO:0034437 F obsolete glycoprotein transmembrane transporter activity
GO:0042157 P lipoprotein metabolic process
GO:0042632 P cholesterol homeostasis
GO:0042803 F protein homodimerization activity
GO:0042987 P amyloid precursor protein catabolic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043531 F ADP binding
GO:0043691 P reverse cholesterol transport
GO:0045542 P positive regulation of cholesterol biosynthetic process
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0055037 C recycling endosome
GO:0055085 P transmembrane transport
GO:0055091 P phospholipid homeostasis
GO:0055099 P cellular response to high density lipoprotein particle stimulus
GO:1901998 P toxin transport
8466 O_BomoMSG17620_complete:A_BomoMSG_c25886_g3_i2
108bp
8467 O_BomoMSG17621_complete:A_BomoMSG_c25888_g1_i1
280bp
 transcription_initiation_factor_TFIID_subunit_8_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005669 C transcription factor TFIID complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0009987 P cellular process
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
8468 O_BomoMSG17622_complete:A_BomoMSG_c25889_g1_i1
131bp
 peptidyl-prolyl_cis-trans_isomerase_G_[Bombyx_mori]
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005737 C cytoplasm
GO:0006457 P protein folding
GO:0016853 F isomerase activity
GO:0042277 F peptide binding
8469 O_BomoMSG17623_5prime_partial:A_BomoMSG_c25889_g1_i3
172bp
8470 O_BomoMSG17624_5prime_partial:A_BomoMSG_c25889_g1_i3
169bp
8471 O_BomoMSG17625_3prime_partial:A_BomoMSG_c25889_g1_i4
266bp
 peptidyl-prolyl_cis-trans_isomerase_G_[Bombyx_mori]
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005737 C cytoplasm
GO:0006457 P protein folding
GO:0016853 F isomerase activity
GO:0042277 F peptide binding
8472 O_BomoMSG17626_5prime_partial:A_BomoMSG_c25889_g1_i4
173bp
8473 O_BomoMSG17627_5prime_partial:A_BomoMSG_c25889_g1_i4
141bp
8474 O_BomoMSG17628_3prime_partial:A_BomoMSG_c25890_g1_i1
329bp
 cyclin_dependent_kinase_7_[Bombyx_mori]
GO:0000079 P regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0003713 F transcription coactivator activity
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005675 C transcription factor TFIIH holo complex
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006294 P nucleotide-excision repair, preincision complex assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006361 P transcription initiation from RNA polymerase I promoter
GO:0006362 P transcription elongation from RNA polymerase I promoter
GO:0006363 P termination of RNA polymerase I transcription
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0006370 P 7-methylguanosine mRNA capping
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0008022 F protein C-terminus binding
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008283 P cell population proliferation
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030521 P androgen receptor signaling pathway
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048471 C perinuclear region of cytoplasm
GO:0050681 F androgen receptor binding
GO:0051301 P cell division
8475 O_BomoMSG17629_5prime_partial:A_BomoMSG_c25891_g1_i1
152bp
 nucleoporin_NUP53_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003697 F single-stranded DNA binding
GO:0005487 F structural constituent of nuclear pore
GO:0005543 F phospholipid binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005886 C plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0006607 P NLS-bearing protein import into nucleus
GO:0006810 P transport
GO:0006999 P nuclear pore organization
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031965 C nuclear membrane
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0044613 C nuclear pore central transport channel
GO:0044615 C nuclear pore nuclear basket
GO:0045111 C intermediate filament cytoskeleton
GO:0051028 P mRNA transport
GO:0055085 P transmembrane transport
8476 O_BomoMSG1762_internal:A_BomoMSG_c8570_g1_i1
188bp
 PREDICTED:_diacylglycerol_kinase_1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0004143 F diacylglycerol kinase activity
GO:0005509 F calcium ion binding
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0007205 P protein kinase C-activating G protein-coupled receptor signaling pathway
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035556 P intracellular signal transduction
GO:0042313 P protein kinase C deactivation
GO:0046872 F metal ion binding
8477 O_BomoMSG17630_5prime_partial:A_BomoMSG_c25891_g1_i2
205bp
 nucleoporin_NUP53_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003697 F single-stranded DNA binding
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005652 C nuclear lamina
GO:0005654 C nucleoplasm
GO:0005886 C plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006607 P NLS-bearing protein import into nucleus
GO:0006810 P transport
GO:0006999 P nuclear pore organization
GO:0007077 P mitotic nuclear membrane disassembly
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0019083 P viral transcription
GO:0031047 P gene silencing by RNA
GO:0031965 C nuclear membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0044613 C nuclear pore central transport channel
GO:0044615 C nuclear pore nuclear basket
GO:0045111 C intermediate filament cytoskeleton
GO:0051028 P mRNA transport
GO:0055085 P transmembrane transport
GO:0075733 P intracellular transport of virus
GO:1900034 P regulation of cellular response to heat
8478 O_BomoMSG17631_internal:A_BomoMSG_c25891_g2_i2
115bp
 nucleoporin_NUP53_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003697 F single-stranded DNA binding
GO:0005487 F structural constituent of nuclear pore
GO:0005543 F phospholipid binding
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0006355 P regulation of transcription, DNA-templated
GO:0006607 P NLS-bearing protein import into nucleus
GO:0006810 P transport
GO:0006999 P nuclear pore organization
GO:0015031 P protein transport
GO:0031965 C nuclear membrane
GO:0044613 C nuclear pore central transport channel
GO:0044615 C nuclear pore nuclear basket
GO:0051028 P mRNA transport
GO:0055085 P transmembrane transport
8479 O_BomoMSG17632_complete:A_BomoMSG_c25892_g1_i1
187bp
 small_androgen_receptor-interacting_protein_[Bombyx_mori]
8480 O_BomoMSG17633_5prime_partial:A_BomoMSG_c25893_g1_i1
326bp
 histone-arginine_methyltransferase_CARMER_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006479 P protein methylation
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0019919 P peptidyl-arginine methylation, to asymmetrical-dimethyl arginine
GO:0032259 P methylation
GO:0034969 P histone arginine methylation
GO:0035241 F protein-arginine omega-N monomethyltransferase activity
GO:0035242 F protein-arginine omega-N asymmetric methyltransferase activity
GO:0042054 F histone methyltransferase activity
8481 O_BomoMSG17634_complete:A_BomoMSG_c25895_g1_i1
254bp
 elongator_complex_protein_5_[Bombyx_mori]
8482 O_BomoMSG17635_3prime_partial:A_BomoMSG_c25896_g1_i1
326bp
 uncharacterized_protein_KIAA2013_homolog_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
8483 O_BomoMSG17636_3prime_partial:A_BomoMSG_c25896_g1_i2
326bp
 uncharacterized_protein_KIAA2013_homolog_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
8484 O_BomoMSG17637_5prime_partial:A_BomoMSG_c25896_g2_i1
299bp
 uncharacterized_protein_KIAA2013_homolog_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
8485 O_BomoMSG17638_complete:A_BomoMSG_c25896_g2_i1
109bp
8486 O_BomoMSG17639_internal:A_BomoMSG_c25897_g1_i1
320bp
 uncharacterized_protein_LOC101738110_[Bombyx_mori]
8487 O_BomoMSG1763_internal:A_BomoMSG_c8571_g1_i1
146bp
 tyrosine-protein_kinase_Btk29A_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007254 P JNK cascade
GO:0007300 P ovarian nurse cell to oocyte transport
GO:0007301 P female germline ring canal formation
GO:0007349 P cellularization
GO:0007391 P dorsal closure
GO:0007424 P open tracheal system development
GO:0007435 P salivary gland morphogenesis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007485 P imaginal disc-derived male genitalia development
GO:0007619 P courtship behavior
GO:0008258 P head involution
GO:0008340 P determination of adult lifespan
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0030036 P actin cytoskeleton organization
GO:0030717 P oocyte karyosome formation
GO:0030723 P ovarian fusome organization
GO:0030833 P regulation of actin filament polymerization
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035277 P spiracle morphogenesis, open tracheal system
GO:0035556 P intracellular signal transduction
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042023 P DNA endoreduplication
GO:0042127 P regulation of cell population proliferation
GO:0044719 P regulation of imaginal disc-derived wing size
GO:0045087 P innate immune response
GO:0045172 C germline ring canal
GO:0045177 C apical part of cell
GO:0046872 F metal ion binding
GO:0046960 P sensitization
GO:0048477 P oogenesis
GO:0071944 C cell periphery
8488 O_BomoMSG17640_internal:A_BomoMSG_c25897_g1_i2
428bp
 uncharacterized_protein_LOC101738110_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0033925 F mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity
8489 O_BomoMSG17641_internal:A_BomoMSG_c25897_g1_i3
339bp
 uncharacterized_protein_LOC101738110_[Bombyx_mori]
8490 O_BomoMSG17642_complete:A_BomoMSG_c25898_g1_i1
451bp
 LOW_QUALITY_PROTEIN:_zinc_finger_protein_Noc_[Bombyx_mori]
GO:0001752 P compound eye photoreceptor fate commitment
GO:0002121 P inter-male aggressive behavior
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007420 P brain development
GO:0007424 P open tracheal system development
GO:0007430 P terminal branching, open tracheal system
GO:0008056 P ocellus development
GO:0008283 P cell population proliferation
GO:0010629 P negative regulation of gene expression
GO:0035214 P eye-antennal disc development
GO:0035218 P leg disc development
GO:0035220 P wing disc development
GO:0046872 F metal ion binding
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