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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8431 O_BomoMSG1758_internal:A_BomoMSG_c8506_g1_i1
126bp
 phosphatidate_cytidylyltransferase,_photoreceptor-specific_[Bombyx_mori]
GO:0004605 F phosphatidate cytidylyltransferase activity
GO:0005635 C nuclear envelope
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005790 C smooth endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006629 P lipid metabolic process
GO:0006655 P phosphatidylglycerol biosynthetic process
GO:0007430 P terminal branching, open tracheal system
GO:0007601 P visual perception
GO:0007602 P phototransduction
GO:0008654 P phospholipid biosynthetic process
GO:0010883 P regulation of lipid storage
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016024 P CDP-diacylglycerol biosynthetic process
GO:0016049 P cell growth
GO:0016056 P rhodopsin mediated signaling pathway
GO:0016740 F transferase activity
GO:0016772 F transferase activity, transferring phosphorus-containing groups
GO:0016779 F nucleotidyltransferase activity
GO:0019915 P lipid storage
GO:0043052 P thermotaxis
GO:0050896 P response to stimulus
GO:0060439 P trachea morphogenesis
8432 O_BomoMSG17590_5prime_partial:A_BomoMSG_c25872_g1_i1
342bp
 PREDICTED:_uncharacterized_protein_LOC106130039_isoform_X1_[Amyelois_transitella]
8433 O_BomoMSG17591_complete:A_BomoMSG_c25872_g1_i1
102bp
8434 O_BomoMSG17592_5prime_partial:A_BomoMSG_c25872_g1_i2
370bp
 PREDICTED:_uncharacterized_protein_LOC106130039_isoform_X1_[Amyelois_transitella]
8435 O_BomoMSG17593_complete:A_BomoMSG_c25872_g1_i2
102bp
8436 O_BomoMSG17594_3prime_partial:A_BomoMSG_c25875_g1_i1
366bp
 hybrid_signal_transduction_histidine_kinase_I_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005938 C cell cortex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0010468 P regulation of gene expression
GO:0010628 P positive regulation of gene expression
GO:0010629 P negative regulation of gene expression
GO:0010800 P positive regulation of peptidyl-threonine phosphorylation
GO:0010821 P regulation of mitochondrion organization
GO:0010971 P positive regulation of G2/M transition of mitotic cell cycle
GO:0033138 P positive regulation of peptidyl-serine phosphorylation
GO:0045787 P positive regulation of cell cycle
GO:0048839 P inner ear development
GO:0050679 P positive regulation of epithelial cell proliferation
GO:0051301 P cell division
GO:0051881 P regulation of mitochondrial membrane potential
GO:0051897 P positive regulation of protein kinase B signaling
GO:0061418 P regulation of transcription from RNA polymerase II promoter in response to hypoxia
GO:0071500 P cellular response to nitrosative stress
GO:1901858 P regulation of mitochondrial DNA metabolic process
GO:1902882 P regulation of response to oxidative stress
GO:1904031 P positive regulation of cyclin-dependent protein kinase activity
GO:1904120 P positive regulation of otic vesicle morphogenesis
8437 O_BomoMSG17595_complete:A_BomoMSG_c25876_g1_i1
425bp
 RNA-binding_protein_40_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005689 C U12-type spliceosomal complex
GO:0030626 F U12 snRNA binding
GO:0032502 P developmental process
GO:0097157 F pre-mRNA intronic binding
8438 O_BomoMSG17596_5prime_partial:A_BomoMSG_c25877_g1_i2
117bp
 TFIIH_basal_transcription_factor_complex_helicase_XPD_subunit_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005675 C transcription factor TFIIH holo complex
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006281 P DNA repair
GO:0006283 P transcription-coupled nucleotide-excision repair
GO:0006289 P nucleotide-excision repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0006979 P response to oxidative stress
GO:0007059 P chromosome segregation
GO:0008022 F protein C-terminus binding
GO:0008026 F helicase activity
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0019907 C cyclin-dependent protein kinase activating kinase holoenzyme complex
GO:0032508 P DNA duplex unwinding
GO:0033683 P nucleotide-excision repair, DNA incision
GO:0035315 P hair cell differentiation
GO:0043139 F 5'-3' DNA helicase activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0071817 C MMXD complex
GO:1901990 P regulation of mitotic cell cycle phase transition
8439 O_BomoMSG17597_internal:A_BomoMSG_c25879_g1_i1
120bp
 pantothenate_kinase_3_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004594 F pantothenate kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0015937 P coenzyme A biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
8440 O_BomoMSG17598_internal:A_BomoMSG_c25879_g1_i1
120bp
8441 O_BomoMSG17599_3prime_partial:A_BomoMSG_c25879_g1_i2
340bp
 pantothenate_kinase_3_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004594 F pantothenate kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0015937 P coenzyme A biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030118 C clathrin coat
GO:0055037 C recycling endosome
GO:0071944 C cell periphery
8442 O_BomoMSG1759_internal:A_BomoMSG_c8506_g1_i1
126bp
8443 O_BomoMSG175_internal:A_BomoMSG_c715_g1_i1
205bp
 longitudinals_lacking_protein-like_[Bombyx_mori]
GO:0000794 C condensed nuclear chromosome
GO:0001700 P embryonic development via the syncytial blastoderm
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007435 P salivary gland morphogenesis
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0031208 F POZ domain binding
GO:0031519 C PcG protein complex
GO:0035167 P larval lymph gland hemopoiesis
GO:0042803 F protein homodimerization activity
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
8444 O_BomoMSG17600_5prime_partial:A_BomoMSG_c25879_g1_i2
140bp
8445 O_BomoMSG17601_complete:A_BomoMSG_c25880_g1_i3
186bp
 putative_glutathione-specific_gamma-glutamylcyclotransferase_2_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
8446 O_BomoMSG17602_3prime_partial:A_BomoMSG_c25881_g1_i1
339bp
 putative_DD41D_transposase_[Bactrocera_tryoni]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
GO:0032502 P developmental process
8447 O_BomoMSG17603_internal:A_BomoMSG_c25882_g1_i1
133bp
 5'-AMP-activated_protein_kinase_subunit_beta-1_isoform_X1_[Helicoverpa_armigera]
GO:0004672 F protein kinase activity
GO:0004679 F AMP-activated protein kinase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0007165 P signal transduction
GO:0010628 P positive regulation of gene expression
GO:0019901 F protein kinase binding
GO:0031588 C nucleotide-activated protein kinase complex
GO:0043234 C protein-containing complex
GO:0045859 P regulation of protein kinase activity
GO:0050790 P regulation of catalytic activity
GO:0051291 P protein heterooligomerization
GO:0061024 P membrane organization
8448 O_BomoMSG17604_3prime_partial:A_BomoMSG_c25882_g1_i2
280bp
 AMP-activated_protein_kinase_beta_subunit_[Bombyx_mori]
GO:0004672 F protein kinase activity
GO:0005634 C nucleus
GO:0006468 P protein phosphorylation
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0007165 P signal transduction
GO:0010628 P positive regulation of gene expression
GO:0031588 C nucleotide-activated protein kinase complex
GO:0045859 P regulation of protein kinase activity
8449 O_BomoMSG17605_3prime_partial:A_BomoMSG_c25883_g1_i1
275bp
 enhancer_of_mRNA-decapping_protein_3_[Bombyx_mori]
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005737 C cytoplasm
GO:0031087 P deadenylation-independent decapping of nuclear-transcribed mRNA
GO:0033962 P P-body assembly
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
GO:1990174 F phosphodiesterase decapping endonuclease activity
8450 O_BomoMSG17606_complete:A_BomoMSG_c25885_g1_i1
285bp
 serine/threonine-protein_phosphatase_Pgam5,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0006470 P protein dephosphorylation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
8451 O_BomoMSG17607_5prime_partial:A_BomoMSG_c25885_g1_i2
289bp
 serine/threonine-protein_phosphatase_Pgam5,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0006470 P protein dephosphorylation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
8452 O_BomoMSG17608_3prime_partial:A_BomoMSG_c25886_g1_i1
500bp
 facilitated_trehalose_transporter_Tret1-like_isoform_X1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015767 P lactose transport
GO:0015768 P maltose transport
GO:0015770 P sucrose transport
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
8453 O_BomoMSG17609_complete:A_BomoMSG_c25886_g1_i1
117bp
8454 O_BomoMSG1760_internal:A_BomoMSG_c8557_g1_i1
108bp
 oxysterol-binding_protein-related_protein_3_[Bombyx_mori]
8455 O_BomoMSG17610_complete:A_BomoMSG_c25886_g2_i1
144bp
 LOW_QUALITY_PROTEIN:_facilitated_trehalose_transporter_Tret1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005351 F carbohydrate:proton symporter activity
GO:0005355 F glucose transmembrane transporter activity
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0035428 P hexose transmembrane transport
GO:0046323 P glucose import
GO:0055085 P transmembrane transport
GO:1904659 P glucose transmembrane transport
8456 O_BomoMSG17611_complete:A_BomoMSG_c25886_g2_i1
134bp
8457 O_BomoMSG17612_3prime_partial:A_BomoMSG_c25886_g2_i1
110bp
 LOW_QUALITY_PROTEIN:_facilitated_trehalose_transporter_Tret1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015767 P lactose transport
GO:0015768 P maltose transport
GO:0015770 P sucrose transport
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
8458 O_BomoMSG17613_3prime_partial:A_BomoMSG_c25886_g1_i2
452bp
 facilitated_trehalose_transporter_Tret1-like_isoform_X1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015767 P lactose transport
GO:0015768 P maltose transport
GO:0015770 P sucrose transport
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
8459 O_BomoMSG17614_complete:A_BomoMSG_c25886_g1_i2
129bp
8460 O_BomoMSG17615_complete:A_BomoMSG_c25886_g3_i1
467bp
 LOW_QUALITY_PROTEIN:_facilitated_trehalose_transporter_Tret1-2_homolog_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005351 F carbohydrate:proton symporter activity
GO:0005355 F glucose transmembrane transporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0015574 F trehalose transmembrane transporter activity
GO:0015771 P trehalose transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0035428 P hexose transmembrane transport
GO:0046323 P glucose import
GO:0055085 P transmembrane transport
GO:1904659 P glucose transmembrane transport
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