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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
841 O_BomoMSG10758_5prime_partial:A_BomoMSG_c22896_g1_i1
121bp
842 O_BomoMSG10759_3prime_partial:A_BomoMSG_c22896_g1_i2
156bp
 uncharacterized_protein_LOC101743204_[Bombyx_mori]
843 O_BomoMSG1075_internal:A_BomoMSG_c5080_g1_i1
135bp
 hypothetical_protein_RR48_12638_[Papilio_machaon]
844 O_BomoMSG10760_5prime_partial:A_BomoMSG_c22896_g1_i2
121bp
845 O_BomoMSG10761_3prime_partial:A_BomoMSG_c22896_g1_i3
156bp
 uncharacterized_protein_LOC101743204_[Bombyx_mori]
846 O_BomoMSG10762_5prime_partial:A_BomoMSG_c22896_g1_i3
121bp
847 O_BomoMSG10763_complete:A_BomoMSG_c22899_g1_i1
170bp
 mpv17-like_protein_[Bombyx_mori]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
848 O_BomoMSG10764_5prime_partial:A_BomoMSG_c22899_g1_i3
141bp
 mpv17-like_protein_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
849 O_BomoMSG10765_complete:A_BomoMSG_c22900_g1_i1
176bp
 CDK-activating_kinase_assembly_factor_MAT1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0007049 P cell cycle
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
GO:0051301 P cell division
850 O_BomoMSG10766_complete:A_BomoMSG_c22900_g1_i1
123bp
 CDK-activating_kinase_assembly_factor_MAT1_[Bombyx_mori]
GO:0000079 P regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005675 C transcription factor TFIIH holo complex
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006366 P transcription by RNA polymerase II
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007512 P adult heart development
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008270 F zinc ion binding
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0021591 P ventricular system development
GO:0043066 P negative regulation of apoptotic process
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0048661 P positive regulation of smooth muscle cell proliferation
GO:0051592 P response to calcium ion
851 O_BomoMSG10767_internal:A_BomoMSG_c22901_g1_i2
162bp
 PREDICTED:_zinc_finger_MYM-type_protein_4_[Amyelois_transitella]
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007010 P cytoskeleton organization
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0022604 P regulation of cell morphogenesis
GO:0046872 F metal ion binding
852 O_BomoMSG10768_internal:A_BomoMSG_c22902_g1_i1
429bp
 menin_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000165 P MAPK cascade
GO:0000400 F four-way junction DNA binding
GO:0000403 F Y-form DNA binding
GO:0000784 C chromosome, telomeric region
GO:0000785 C chromatin
GO:0000790 C chromatin
GO:0001503 P ossification
GO:0001776 P leukocyte homeostasis
GO:0001933 P negative regulation of protein phosphorylation
GO:0002051 P osteoblast fate commitment
GO:0002076 P osteoblast development
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003690 F double-stranded DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007050 P regulation of cell cycle
GO:0008285 P negative regulation of cell population proliferation
GO:0009411 P response to UV
GO:0010332 P response to gamma radiation
GO:0010468 P regulation of gene expression
GO:0010628 P positive regulation of gene expression
GO:0016363 C nuclear matrix
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0030097 P hemopoiesis
GO:0030511 P positive regulation of transforming growth factor beta receptor signaling pathway
GO:0030674 F protein-macromolecule adaptor activity
GO:0031062 P positive regulation of histone methylation
GO:0032092 P positive regulation of protein binding
GO:0032154 C cleavage furrow
GO:0034968 P histone lysine methylation
GO:0035097 C histone methyltransferase complex
GO:0043065 P positive regulation of apoptotic process
GO:0043234 C protein-containing complex
GO:0043280 P positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0043433 P negative regulation of DNA-binding transcription factor activity
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045597 P positive regulation of cell differentiation
GO:0045668 P negative regulation of osteoblast differentiation
GO:0045669 P positive regulation of osteoblast differentiation
GO:0045736 P negative regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0045786 P negative regulation of cell cycle
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046329 P negative regulation of JNK cascade
GO:0046621 P negative regulation of organ growth
GO:0047485 F protein N-terminus binding
GO:0048704 P embryonic skeletal system morphogenesis
GO:0051781 P positive regulation of cell division
GO:0051974 P negative regulation of telomerase activity
GO:0060021 P roof of mouth development
GO:0060135 P maternal process involved in female pregnancy
GO:0070412 F R-SMAD binding
853 O_BomoMSG10769_complete:A_BomoMSG_c22903_g1_i1
362bp
 UDP-glucose_4-epimerase_[Bombyx_mori]
GO:0003974 F UDP-N-acetylglucosamine 4-epimerase activity
GO:0003978 F UDP-glucose 4-epimerase activity
GO:0005975 P carbohydrate metabolic process
GO:0006012 P galactose metabolic process
GO:0016853 F isomerase activity
GO:0016857 F racemase and epimerase activity, acting on carbohydrates and derivatives
GO:0019233 P sensory perception of pain
GO:0035167 P larval lymph gland hemopoiesis
854 O_BomoMSG1076_internal:A_BomoMSG_c5080_g1_i1
135bp
855 O_BomoMSG10770_complete:A_BomoMSG_c22903_g1_i1
128bp
 hypothetical_protein_BURPS1710b_3148_[Burkholderia_pseudomallei_1710b]
856 O_BomoMSG10771_complete:A_BomoMSG_c22903_g1_i2
357bp
 UDP-glucose_4-epimerase_[Bombyx_mori]
GO:0003974 F UDP-N-acetylglucosamine 4-epimerase activity
GO:0003978 F UDP-glucose 4-epimerase activity
GO:0005975 P carbohydrate metabolic process
GO:0006012 P galactose metabolic process
GO:0016853 F isomerase activity
GO:0016857 F racemase and epimerase activity, acting on carbohydrates and derivatives
GO:0019233 P sensory perception of pain
GO:0035167 P larval lymph gland hemopoiesis
857 O_BomoMSG10772_complete:A_BomoMSG_c22903_g1_i2
128bp
 hypothetical_protein_BURPS1710b_3148_[Burkholderia_pseudomallei_1710b]
858 O_BomoMSG10773_5prime_partial:A_BomoMSG_c22905_g1_i1
103bp
859 O_BomoMSG10774_complete:A_BomoMSG_c22906_g1_i1
316bp
 target_of_rapamycin_complex_subunit_lst8_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
860 O_BomoMSG10775_complete:A_BomoMSG_c22906_g1_i1
150bp
861 O_BomoMSG10776_complete:A_BomoMSG_c22907_g1_i1
280bp
 vesicle-associated_membrane_protein-associated_protein_B_isoform_X1_[Bombyx_mori]
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0033149 F FFAT motif binding
GO:0043005 C neuron projection
GO:0045202 C synapse
GO:0070972 P protein localization to endoplasmic reticulum
862 O_BomoMSG10777_complete:A_BomoMSG_c22907_g1_i2
253bp
 vesicle-associated_membrane_protein-associated_protein_B_isoform_X3_[Bombyx_mori]
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0033149 F FFAT motif binding
GO:0043005 C neuron projection
GO:0045202 C synapse
GO:0070972 P protein localization to endoplasmic reticulum
863 O_BomoMSG10778_complete:A_BomoMSG_c22907_g1_i3
276bp
 vesicle-associated_membrane_protein-associated_protein_B_isoform_X2_[Bombyx_mori]
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0033149 F FFAT motif binding
GO:0043005 C neuron projection
GO:0045202 C synapse
GO:0070972 P protein localization to endoplasmic reticulum
864 O_BomoMSG10779_internal:A_BomoMSG_c22908_g1_i1
309bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101747087_[Bombyx_mori]
GO:0001701 P in utero embryonic development
GO:0004222 F metalloendopeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005798 C Golgi-associated vesicle
GO:0005802 C trans-Golgi network
GO:0006468 P protein phosphorylation
GO:0006508 P proteolysis
GO:0006509 P membrane protein ectodomain proteolysis
GO:0007162 P negative regulation of cell adhesion
GO:0007219 P Notch signaling pathway
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0017124 F SH3 domain binding
GO:0019901 F protein kinase binding
GO:0042803 F protein homodimerization activity
GO:0045670 P regulation of osteoclast differentiation
GO:0046872 F metal ion binding
865 O_BomoMSG1077_internal:A_BomoMSG_c5081_g1_i1
109bp
866 O_BomoMSG10780_internal:A_BomoMSG_c22908_g1_i2
549bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101747087_[Bombyx_mori]
GO:0001701 P in utero embryonic development
GO:0004222 F metalloendopeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005798 C Golgi-associated vesicle
GO:0005802 C trans-Golgi network
GO:0006468 P protein phosphorylation
GO:0006508 P proteolysis
GO:0006509 P membrane protein ectodomain proteolysis
GO:0007162 P negative regulation of cell adhesion
GO:0007219 P Notch signaling pathway
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0017124 F SH3 domain binding
GO:0019901 F protein kinase binding
GO:0042803 F protein homodimerization activity
GO:0045670 P regulation of osteoclast differentiation
GO:0046872 F metal ion binding
867 O_BomoMSG10781_complete:A_BomoMSG_c22908_g1_i2
105bp
868 O_BomoMSG10782_internal:A_BomoMSG_c22908_g1_i3
293bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101747087_[Bombyx_mori]
GO:0001701 P in utero embryonic development
GO:0004222 F metalloendopeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005798 C Golgi-associated vesicle
GO:0005802 C trans-Golgi network
GO:0006468 P protein phosphorylation
GO:0006508 P proteolysis
GO:0006509 P membrane protein ectodomain proteolysis
GO:0007162 P negative regulation of cell adhesion
GO:0007219 P Notch signaling pathway
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0017124 F SH3 domain binding
GO:0019901 F protein kinase binding
GO:0042803 F protein homodimerization activity
GO:0045670 P regulation of osteoclast differentiation
GO:0046872 F metal ion binding
869 O_BomoMSG10783_3prime_partial:A_BomoMSG_c22909_g1_i1
487bp
 uncharacterized_protein_LOC101743981_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008028 F monocarboxylic acid transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015718 P monocarboxylic acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0046415 P urate metabolic process
GO:0055085 P transmembrane transport
870 O_BomoMSG10784_internal:A_BomoMSG_c22912_g1_i2
170bp
 DNA_polymerase_delta_subunit_3_[Bombyx_mori]
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