Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
871	O_BomoMSG10785_3prime_partial:A_BomoMSG_c22914_g1_i1 212bp	Bomo_Chr8	importin_subunit_alpha-2_isoform_X1_[Bombyx_mori]	GO:0005515 F protein binding GO:0005634 C nucleus GO:0005643 C nuclear pore GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006606 P protein import into nucleus GO:0006607 P NLS-bearing protein import into nucleus GO:0006810 P transport GO:0008139 F nuclear localization sequence binding GO:0008565 F obsolete protein transporter activity GO:0015031 P protein transport GO:0042542 P response to hydrogen peroxide GO:0070062 C extracellular exosome
872	O_BomoMSG10786_complete:A_BomoMSG_c22914_g1_i1 108bp	Bomo_Chr8
873	O_BomoMSG10787_complete:A_BomoMSG_c22922_g1_i1 383bp	Bomo_Chr8	loquacious_isoform_X3_[Bombyx_mori]	GO:0003723 F RNA binding GO:0003725 F double-stranded RNA binding GO:0005515 F protein binding GO:0005622 C intracellular anatomical structure GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0006468 P protein phosphorylation GO:0016020 C membrane GO:0019899 F enzyme binding GO:0030422 P production of siRNA involved in RNA interference GO:0031047 P gene silencing by RNA GO:0031054 P pre-miRNA processing GO:0034599 P cellular response to oxidative stress GO:0035196 P production of miRNAs involved in gene silencing by miRNA GO:0042473 P outer ear morphogenesis GO:0042474 P middle ear morphogenesis GO:0042802 F identical protein binding GO:0042803 F protein homodimerization activity GO:0044822 F RNA binding GO:0048471 C perinuclear region of cytoplasm GO:0048705 P skeletal system morphogenesis GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
874	O_BomoMSG10788_complete:A_BomoMSG_c22922_g1_i2 380bp	Bomo_Chr8	loquacious_isoform_X5_[Bombyx_mori]	GO:0003723 F RNA binding GO:0003725 F double-stranded RNA binding GO:0005515 F protein binding GO:0005622 C intracellular anatomical structure GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0006468 P protein phosphorylation GO:0016020 C membrane GO:0019899 F enzyme binding GO:0030422 P production of siRNA involved in RNA interference GO:0031047 P gene silencing by RNA GO:0031054 P pre-miRNA processing GO:0034599 P cellular response to oxidative stress GO:0035196 P production of miRNAs involved in gene silencing by miRNA GO:0042473 P outer ear morphogenesis GO:0042474 P middle ear morphogenesis GO:0042802 F identical protein binding GO:0042803 F protein homodimerization activity GO:0044822 F RNA binding GO:0048471 C perinuclear region of cytoplasm GO:0048705 P skeletal system morphogenesis GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
875	O_BomoMSG10789_3prime_partial:A_BomoMSG_c22923_g1_i1 167bp	Bomo_Chr22	E3_ubiquitin-protein_ligase_Hakai_isoform_X2_[Bombyx_mori]	GO:0004842 F ubiquitin-protein transferase activity GO:0007162 P negative regulation of cell adhesion GO:0008270 F zinc ion binding GO:0016567 P protein ubiquitination GO:0016874 F ligase activity GO:0030155 P regulation of cell adhesion GO:0030335 P positive regulation of cell migration GO:0045807 P positive regulation of endocytosis GO:0046872 F metal ion binding GO:0061630 F ubiquitin protein ligase activity
876	O_BomoMSG1078_internal:A_BomoMSG_c5081_g1_i1 109bp	Bomo_Chr10	NCK-interacting_protein_with_SH3_domain_isoform_X1_[Bombyx_mori]	GO:0005634 C nucleus GO:0008180 C COP9 signalosome GO:0010976 P positive regulation of neuron projection development GO:0017124 F SH3 domain binding
877	O_BomoMSG10790_3prime_partial:A_BomoMSG_c22923_g1_i2 323bp	Bomo_Chr22	E3_ubiquitin-protein_ligase_Hakai_isoform_X1_[Bombyx_mori]	GO:0004842 F ubiquitin-protein transferase activity GO:0007162 P negative regulation of cell adhesion GO:0008270 F zinc ion binding GO:0016567 P protein ubiquitination GO:0016874 F ligase activity GO:0030155 P regulation of cell adhesion GO:0030335 P positive regulation of cell migration GO:0045807 P positive regulation of endocytosis GO:0046872 F metal ion binding GO:0061630 F ubiquitin protein ligase activity
878	O_BomoMSG10791_5prime_partial:A_BomoMSG_c22923_g1_i2 119bp	Bomo_Chr22
879	O_BomoMSG10792_internal:A_BomoMSG_c22923_g1_i3 158bp	Bomo_Chr22	E3_ubiquitin-protein_ligase_Hakai_isoform_X1_[Bombyx_mori]	GO:0004842 F ubiquitin-protein transferase activity GO:0007162 P negative regulation of cell adhesion GO:0008270 F zinc ion binding GO:0016567 P protein ubiquitination GO:0016874 F ligase activity GO:0030155 P regulation of cell adhesion GO:0030335 P positive regulation of cell migration GO:0045807 P positive regulation of endocytosis GO:0046872 F metal ion binding GO:0061630 F ubiquitin protein ligase activity
880	O_BomoMSG10793_5prime_partial:A_BomoMSG_c22923_g1_i3 119bp	Bomo_Chr22
881	O_BomoMSG10794_internal:A_BomoMSG_c22924_g1_i1 194bp	Bomo_Chr24	zinc_finger_protein_208_[Bombyx_mori]	GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0016567 P protein ubiquitination GO:0046872 F metal ion binding GO:0050767 P regulation of neurogenesis
882	O_BomoMSG10795_5prime_partial:A_BomoMSG_c22924_g1_i2 577bp	Bomo_Chr24	zinc_finger_protein_208_[Bombyx_mori]	GO:0003676 F nucleic acid binding GO:0003677 F DNA binding GO:0005634 C nucleus GO:0005654 C nucleoplasm GO:0005737 C cytoplasm GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0008150 P biological_process GO:0046872 F metal ion binding
883	O_BomoMSG10796_complete:A_BomoMSG_c22927_g1_i1 115bp	Bomo_Chr18	cytochrome_b5_isoform_X4_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005737 C cytoplasm GO:0005739 C mitochondrion GO:0005783 C endoplasmic reticulum GO:0005789 C endoplasmic reticulum membrane GO:0009055 F electron transfer activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0019899 F enzyme binding GO:0020037 F heme binding GO:0031090 C organelle membrane GO:0043231 C intracellular membrane-bounded organelle GO:0046686 P response to cadmium ion GO:0046872 F metal ion binding GO:0055114 P obsolete oxidation-reduction process GO:0070062 C extracellular exosome
884	O_BomoMSG10797_complete:A_BomoMSG_c22928_g1_i2 103bp	Bomo_Chr16	Retrotransposable_element_Tf2_155_kDa_protein_type_1_[Papilio_machaon]
885	O_BomoMSG10798_3prime_partial:A_BomoMSG_c22929_g1_i1 336bp	Bomo_Chr26	uncharacterized_protein_LOC101738872_[Bombyx_mori]
886	O_BomoMSG10799_complete:A_BomoMSG_c22930_g2_i1 339bp	Bomo_Chr19	protein_KRI1_homolog_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0008150 P biological_process
887	O_BomoMSG1079_internal:A_BomoMSG_c5093_g1_i1 118bp	Bomo_Chr10
888	O_BomoMSG107_internal:A_BomoMSG_c388_g1_i1 114bp	Bomo_Chr25	dentin_sialophosphoprotein-like_[Bombyx_mori]
889	O_BomoMSG10800_5prime_partial:A_BomoMSG_c22930_g2_i1 129bp	Bomo_Chr19
890	O_BomoMSG10801_3prime_partial:A_BomoMSG_c22930_g2_i2 353bp	Bomo_Chr19	protein_KRI1_homolog_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0008150 P biological_process
891	O_BomoMSG10802_5prime_partial:A_BomoMSG_c22930_g2_i2 136bp	Bomo_Chr19
892	O_BomoMSG10803_complete:A_BomoMSG_c22931_g1_i1 104bp	Bomo_Chr11	uncharacterized_protein_LOC101740309_isoform_X2_[Bombyx_mori]
893	O_BomoMSG10804_internal:A_BomoMSG_c22931_g1_i2 116bp	Bomo_Chr11	uncharacterized_protein_LOC101740309_isoform_X2_[Bombyx_mori]
894	O_BomoMSG10805_3prime_partial:A_BomoMSG_c22931_g1_i3 223bp	Bomo_Chr11	uncharacterized_protein_LOC101740309_isoform_X2_[Bombyx_mori]
895	O_BomoMSG10806_internal:A_BomoMSG_c22931_g1_i4 141bp	Bomo_Chr11	uncharacterized_protein_LOC101740309_isoform_X2_[Bombyx_mori]
896	O_BomoMSG10807_complete:A_BomoMSG_c22935_g1_i1 149bp	Bomo_Chr12	reverse_transcriptase_[Papilio_xuthus]
897	O_BomoMSG10808_internal:A_BomoMSG_c22936_g1_i1 210bp	Bomo_Chr24	chromatin_modification-related_protein_EAF7_[Bombyx_mori]
898	O_BomoMSG10809_3prime_partial:A_BomoMSG_c22936_g1_i2 214bp	Bomo_Chr24	chromatin_modification-related_protein_EAF7_[Bombyx_mori]
899	O_BomoMSG1080_internal:A_BomoMSG_c5093_g1_i1 118bp	Bomo_Chr10	vacuolar_protein_sorting-associated_protein_13D_[Bombyx_mori]	GO:0005622 C intracellular anatomical structure GO:0006623 P protein targeting to vacuole GO:0019898 C extrinsic component of membrane GO:0045053 P protein retention in Golgi apparatus GO:0070062 C extracellular exosome
900	O_BomoMSG10810_3prime_partial:A_BomoMSG_c22936_g1_i3 338bp	Bomo_Chr24	chromatin_modification-related_protein_EAF7_[Bombyx_mori]