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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8341 O_BomoMSG17508_complete:A_BomoMSG_c25848_g1_i2
158bp
8342 O_BomoMSG17509_5prime_partial:A_BomoMSG_c25849_g1_i1
573bp
 SUN_domain-containing_ossification_factor_isoform_X1_[Bombyx_mori]
GO:0001503 P ossification
GO:0005783 C endoplasmic reticulum
GO:0005791 C rough endoplasmic reticulum
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030867 C rough endoplasmic reticulum membrane
GO:0032967 P positive regulation of collagen biosynthetic process
GO:0045669 P positive regulation of osteoblast differentiation
GO:0046850 P regulation of bone remodeling
8343 O_BomoMSG1750_3prime_partial:A_BomoMSG_c8467_g1_i1
332bp
 dimethyladenosine_transferase_1,_mitochondrial_[Bombyx_mori]
GO:0000154 P rRNA modification
GO:0000179 F rRNA (adenine-N6,N6-)-dimethyltransferase activity
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0008649 F rRNA methyltransferase activity
GO:0016740 F transferase activity
GO:0031167 P rRNA methylation
GO:0032259 P methylation
8344 O_BomoMSG17510_complete:A_BomoMSG_c25849_g1_i1
116bp
8345 O_BomoMSG17511_complete:A_BomoMSG_c25849_g1_i1
106bp
8346 O_BomoMSG17512_5prime_partial:A_BomoMSG_c25849_g1_i2
753bp
 SUN_domain-containing_ossification_factor_isoform_X1_[Bombyx_mori]
GO:0001503 P ossification
GO:0005783 C endoplasmic reticulum
GO:0005791 C rough endoplasmic reticulum
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030867 C rough endoplasmic reticulum membrane
GO:0032967 P positive regulation of collagen biosynthetic process
GO:0045669 P positive regulation of osteoblast differentiation
GO:0046850 P regulation of bone remodeling
8347 O_BomoMSG17513_complete:A_BomoMSG_c25849_g1_i2
116bp
8348 O_BomoMSG17514_complete:A_BomoMSG_c25849_g1_i2
108bp
8349 O_BomoMSG17515_complete:A_BomoMSG_c25849_g1_i2
106bp
8350 O_BomoMSG17516_5prime_partial:A_BomoMSG_c25849_g1_i2
104bp
8351 O_BomoMSG17517_5prime_partial:A_BomoMSG_c25849_g1_i3
596bp
 SUN_domain-containing_ossification_factor_isoform_X1_[Bombyx_mori]
GO:0001503 P ossification
GO:0005783 C endoplasmic reticulum
GO:0005791 C rough endoplasmic reticulum
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030867 C rough endoplasmic reticulum membrane
GO:0032967 P positive regulation of collagen biosynthetic process
GO:0045669 P positive regulation of osteoblast differentiation
GO:0046850 P regulation of bone remodeling
8352 O_BomoMSG17518_complete:A_BomoMSG_c25849_g1_i3
116bp
8353 O_BomoMSG17519_complete:A_BomoMSG_c25849_g1_i3
106bp
8354 O_BomoMSG1751_5prime_partial:A_BomoMSG_c8470_g1_i1
162bp
 putative_fatty_acyl-CoA_reductase_CG5065_[Bombyx_mori]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0006629 P lipid metabolic process
GO:0008611 P ether lipid biosynthetic process
GO:0010025 P wax biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0035336 P long-chain fatty-acyl-CoA metabolic process
GO:0050062 F long-chain-fatty-acyl-CoA reductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0080019 F fatty-acyl-CoA reductase (alcohol-forming) activity
8355 O_BomoMSG17520_5prime_partial:A_BomoMSG_c25849_g1_i3
104bp
8356 O_BomoMSG17521_5prime_partial:A_BomoMSG_c25850_g1_i2
605bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006310 P DNA recombination
GO:0008152 P metabolic process
GO:0009036 F type II site-specific deoxyribonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0032197 P transposition, RNA-mediated
GO:0032199 P reverse transcription involved in RNA-mediated transposition
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
8357 O_BomoMSG17522_complete:A_BomoMSG_c25850_g1_i2
125bp
8358 O_BomoMSG17523_5prime_partial:A_BomoMSG_c25850_g1_i3
605bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006310 P DNA recombination
GO:0008152 P metabolic process
GO:0009036 F type II site-specific deoxyribonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0032197 P transposition, RNA-mediated
GO:0032199 P reverse transcription involved in RNA-mediated transposition
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
8359 O_BomoMSG17524_complete:A_BomoMSG_c25850_g1_i3
125bp
8360 O_BomoMSG17525_5prime_partial:A_BomoMSG_c25850_g1_i4
605bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006310 P DNA recombination
GO:0008152 P metabolic process
GO:0009036 F type II site-specific deoxyribonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0032197 P transposition, RNA-mediated
GO:0032199 P reverse transcription involved in RNA-mediated transposition
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
8361 O_BomoMSG17526_complete:A_BomoMSG_c25850_g1_i4
125bp
8362 O_BomoMSG17527_5prime_partial:A_BomoMSG_c25850_g1_i4
107bp
8363 O_BomoMSG17528_5prime_partial:A_BomoMSG_c25851_g1_i1
229bp
 programmed_cell_death_protein_2-like_[Bombyx_mori]
GO:0005737 C cytoplasm
8364 O_BomoMSG17529_complete:A_BomoMSG_c25851_g1_i2
429bp
 programmed_cell_death_protein_2-like_[Bombyx_mori]
GO:0005737 C cytoplasm
8365 O_BomoMSG1752_internal:A_BomoMSG_c8474_g1_i1
164bp
 probable_peroxisomal_acyl-coenzyme_A_oxidase_1_[Bombyx_mori]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0003997 F acyl-CoA oxidase activity
GO:0005777 C peroxisome
GO:0006091 P generation of precursor metabolites and energy
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0006693 P prostaglandin metabolic process
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0019395 P fatty acid oxidation
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0033540 P fatty acid beta-oxidation using acyl-CoA oxidase
GO:0050660 F flavin adenine dinucleotide binding
GO:0052890 F oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
8366 O_BomoMSG17530_complete:A_BomoMSG_c25851_g1_i3
204bp
 programmed_cell_death_protein_2-like_[Bombyx_mori]
GO:0005737 C cytoplasm
8367 O_BomoMSG17531_complete:A_BomoMSG_c25852_g1_i2
497bp
 uncharacterized_protein_LOC101740452_[Bombyx_mori]
GO:0000187 P obsolete activation of MAPK activity
GO:0001702 P gastrulation with mouth forming second
GO:0001759 P organ induction
GO:0002088 P lens development in camera-type eye
GO:0003281 P ventricular septum development
GO:0005068 F transmembrane receptor protein tyrosine kinase adaptor activity
GO:0005104 F fibroblast growth factor receptor binding
GO:0005158 F insulin receptor binding
GO:0005168 F neurotrophin TRKA receptor binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007405 P neuroblast proliferation
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0008595 P anterior/posterior axis specification, embryo
GO:0016020 C membrane
GO:0030900 P forebrain development
GO:0042981 P regulation of apoptotic process
GO:0046619 P lens placode formation involved in camera-type eye formation
GO:0050678 P regulation of epithelial cell proliferation
GO:0060527 P prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis
GO:0070307 P lens fiber cell development
GO:0070372 P regulation of ERK1 and ERK2 cascade
8368 O_BomoMSG17532_complete:A_BomoMSG_c25854_g1_i1
302bp
 uncharacterized_protein_LOC101746488_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0005634 C nucleus
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0008150 P biological_process
GO:0030154 P cell differentiation
GO:0044822 F RNA binding
8369 O_BomoMSG17533_complete:A_BomoMSG_c25854_g1_i1
130bp
8370 O_BomoMSG17534_complete:A_BomoMSG_c25854_g1_i2
370bp
 uncharacterized_protein_LOC101746488_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0005634 C nucleus
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0008150 P biological_process
GO:0030154 P cell differentiation
GO:0044822 F RNA binding
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