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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8311 O_BomoMSG17481_3prime_partial:A_BomoMSG_c25842_g1_i3
336bp
 uncharacterized_protein_LOC101741884_[Bombyx_mori]
8312 O_BomoMSG17482_complete:A_BomoMSG_c25844_g1_i1
119bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
8313 O_BomoMSG17483_5prime_partial:A_BomoMSG_c25844_g1_i3
161bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
8314 O_BomoMSG17484_complete:A_BomoMSG_c25844_g2_i1
435bp
 26S_protease_regulatory_subunit_7_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000502 C proteasome complex
GO:0000932 C P-body
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0022624 C proteasome accessory complex
GO:0030163 P protein catabolic process
8315 O_BomoMSG17485_complete:A_BomoMSG_c25844_g2_i1
186bp
 hypothetical_protein_CAALFM_C105250WA_[Candida_albicans_SC5314]
8316 O_BomoMSG17486_complete:A_BomoMSG_c25844_g2_i1
135bp
 hypothetical_protein_CLUG_03378_[Clavispora_lusitaniae_ATCC_42720]
8317 O_BomoMSG17487_complete:A_BomoMSG_c25844_g2_i2
435bp
 26S_protease_regulatory_subunit_7_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000502 C proteasome complex
GO:0000932 C P-body
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0022624 C proteasome accessory complex
GO:0030163 P protein catabolic process
8318 O_BomoMSG17488_complete:A_BomoMSG_c25844_g2_i2
186bp
 hypothetical_protein_CAALFM_C105250WA_[Candida_albicans_SC5314]
8319 O_BomoMSG17489_complete:A_BomoMSG_c25844_g2_i2
135bp
 hypothetical_protein_CLUG_03378_[Clavispora_lusitaniae_ATCC_42720]
8320 O_BomoMSG1748_3prime_partial:A_BomoMSG_c8465_g1_i1
99bp
 hypothetical_protein_TSUD_212730_[Trifolium_subterraneum]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
8321 O_BomoMSG17490_complete:A_BomoMSG_c25844_g3_i1
107bp
 CD63_antigen_isoform_X2_[Bombyx_mori]
8322 O_BomoMSG17491_complete:A_BomoMSG_c25844_g3_i2
109bp
 CD63_antigen_isoform_X2_[Bombyx_mori]
8323 O_BomoMSG17492_5prime_partial:A_BomoMSG_c25845_g1_i1
198bp
 uncharacterized_protein_LOC101738072_isoform_X3_[Bombyx_mori]
8324 O_BomoMSG17493_complete:A_BomoMSG_c25845_g1_i1
133bp
8325 O_BomoMSG17494_5prime_partial:A_BomoMSG_c25845_g1_i2
173bp
 uncharacterized_protein_LOC101738072_isoform_X3_[Bombyx_mori]
8326 O_BomoMSG17495_complete:A_BomoMSG_c25845_g1_i2
133bp
8327 O_BomoMSG17496_5prime_partial:A_BomoMSG_c25845_g1_i2
124bp
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0007050 P regulation of cell cycle
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
GO:0010632 P regulation of epithelial cell migration
GO:0016020 C membrane
GO:0016055 P Wnt signaling pathway
GO:0016887 F ATP hydrolysis activity
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0032587 C ruffle membrane
GO:0032886 P regulation of microtubule-based process
GO:0042060 P wound healing
GO:0042995 C cell projection
GO:0043001 P Golgi to plasma membrane protein transport
GO:0046872 F metal ion binding
GO:0051893 P regulation of focal adhesion assembly
8328 O_BomoMSG17497_5prime_partial:A_BomoMSG_c25845_g1_i3
397bp
 uncharacterized_protein_LOC101738072_isoform_X3_[Bombyx_mori]
8329 O_BomoMSG17498_complete:A_BomoMSG_c25845_g1_i3
133bp
8330 O_BomoMSG17499_complete:A_BomoMSG_c25845_g1_i3
116bp
8331 O_BomoMSG1749_internal:A_BomoMSG_c8465_g1_i2
213bp
 Yokozuna_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
8332 O_BomoMSG174_internal:A_BomoMSG_c711_g1_i1
138bp
 FK506-binding_protein_precursor_[Bombyx_mori]
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005783 C endoplasmic reticulum
GO:0006457 P protein folding
GO:0008152 P metabolic process
GO:0016853 F isomerase activity
8333 O_BomoMSG17500_5prime_partial:A_BomoMSG_c25845_g1_i5
483bp
 uncharacterized_protein_LOC101738072_isoform_X3_[Bombyx_mori]
8334 O_BomoMSG17501_complete:A_BomoMSG_c25845_g1_i5
133bp
8335 O_BomoMSG17502_complete:A_BomoMSG_c25845_g1_i5
116bp
8336 O_BomoMSG17503_complete:A_BomoMSG_c25845_g1_i5
115bp
8337 O_BomoMSG17504_internal:A_BomoMSG_c25846_g1_i1
208bp
 hypothetical_protein_[Escherichia_coli]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
8338 O_BomoMSG17505_internal:A_BomoMSG_c25846_g3_i1
215bp
 hypothetical_protein_[Escherichia_coli]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
8339 O_BomoMSG17506_5prime_partial:A_BomoMSG_c25847_g2_i1
108bp
 PREDICTED:_uncharacterized_protein_LOC100368076_[Saccoglossus_kowalevskii]
8340 O_BomoMSG17507_5prime_partial:A_BomoMSG_c25848_g1_i2
349bp
 retinol_dehydrogenase_13_[Bombyx_mori]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0008152 P metabolic process
GO:0009644 P response to high light intensity
GO:0010842 P retina layer formation
GO:0016491 F oxidoreductase activity
GO:0042462 P eye photoreceptor cell development
GO:0042572 P retinol metabolic process
GO:0052650 F NADP-retinol dehydrogenase activity
GO:0055114 P obsolete oxidation-reduction process
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