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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8371 O_BomoMSG17535_complete:A_BomoMSG_c25854_g1_i2
130bp
8372 O_BomoMSG17536_internal:A_BomoMSG_c25855_g1_i1
251bp
 methylosome_protein_50_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008327 F methyl-CpG binding
GO:0034709 C methylosome
8373 O_BomoMSG17537_5prime_partial:A_BomoMSG_c25855_g1_i2
142bp
 methylosome_protein_50_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0034709 C methylosome
GO:0035097 C histone methyltransferase complex
8374 O_BomoMSG17538_complete:A_BomoMSG_c25855_g1_i3
334bp
 methylosome_protein_50_[Bombyx_mori]
GO:0000387 P spliceosomal snRNP assembly
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008284 P positive regulation of cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0008327 F methyl-CpG binding
GO:0016274 F protein-arginine N-methyltransferase activity
GO:0030374 F nuclear receptor coactivator activity
GO:0034709 C methylosome
GO:0035246 P peptidyl-arginine N-methylation
GO:0060528 P secretory columnal luminar epithelial cell differentiation involved in prostate glandular acinus development
GO:0060770 P negative regulation of epithelial cell proliferation involved in prostate gland development
8375 O_BomoMSG17539_internal:A_BomoMSG_c25856_g1_i1
252bp
 cactus_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006909 P phagocytosis
GO:0006952 P defense response
GO:0006955 P immune response
GO:0006967 P positive regulation of antifungal peptide biosynthetic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0008063 P Toll signaling pathway
GO:0008134 F transcription factor binding
GO:0009620 P response to fungus
GO:0009950 P dorsal/ventral axis specification
GO:0019730 P antimicrobial humoral response
GO:0019732 P antifungal humoral response
GO:0030097 P hemopoiesis
GO:0031594 C neuromuscular junction
GO:0042308 P negative regulation of protein import into nucleus
GO:0042994 P cytoplasmic sequestering of transcription factor
GO:0045087 P innate immune response
GO:0046843 P dorsal appendage formation
GO:0048477 P oogenesis
8376 O_BomoMSG1753_internal:A_BomoMSG_c8474_g1_i2
186bp
 probable_peroxisomal_acyl-coenzyme_A_oxidase_1_[Bombyx_mori]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0003997 F acyl-CoA oxidase activity
GO:0005777 C peroxisome
GO:0006091 P generation of precursor metabolites and energy
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0006693 P prostaglandin metabolic process
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0019395 P fatty acid oxidation
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0033540 P fatty acid beta-oxidation using acyl-CoA oxidase
GO:0050660 F flavin adenine dinucleotide binding
GO:0052890 F oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
8377 O_BomoMSG17540_3prime_partial:A_BomoMSG_c25856_g1_i2
261bp
 cactus_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006909 P phagocytosis
GO:0006952 P defense response
GO:0006955 P immune response
GO:0006967 P positive regulation of antifungal peptide biosynthetic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0008063 P Toll signaling pathway
GO:0008134 F transcription factor binding
GO:0009620 P response to fungus
GO:0009950 P dorsal/ventral axis specification
GO:0019730 P antimicrobial humoral response
GO:0019732 P antifungal humoral response
GO:0030097 P hemopoiesis
GO:0031594 C neuromuscular junction
GO:0042308 P negative regulation of protein import into nucleus
GO:0042994 P cytoplasmic sequestering of transcription factor
GO:0045087 P innate immune response
GO:0046843 P dorsal appendage formation
GO:0048477 P oogenesis
8378 O_BomoMSG17541_complete:A_BomoMSG_c25857_g1_i1
301bp
 phytanoyl-CoA_dioxygenase_peroxisomal_precursor_[Bombyx_mori]
GO:0001561 P fatty acid alpha-oxidation
GO:0006631 P fatty acid metabolic process
GO:0016491 F oxidoreductase activity
GO:0031418 F L-ascorbic acid binding
GO:0046872 F metal ion binding
GO:0048244 F phytanoyl-CoA dioxygenase activity
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
8379 O_BomoMSG17542_complete:A_BomoMSG_c25857_g1_i1
123bp
8380 O_BomoMSG17543_complete:A_BomoMSG_c25857_g1_i3
228bp
 phytanoyl-CoA_dioxygenase_peroxisomal_precursor_[Bombyx_mori]
GO:0001561 P fatty acid alpha-oxidation
GO:0003824 F catalytic activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005777 C peroxisome
GO:0006631 P fatty acid metabolic process
GO:0006720 P isoprenoid metabolic process
GO:0016491 F oxidoreductase activity
GO:0031418 F L-ascorbic acid binding
GO:0046872 F metal ion binding
GO:0048037 F obsolete cofactor binding
GO:0048244 F phytanoyl-CoA dioxygenase activity
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0097089 P methyl-branched fatty acid metabolic process
8381 O_BomoMSG17544_5prime_partial:A_BomoMSG_c25857_g1_i4
309bp
 phytanoyl-CoA_dioxygenase_peroxisomal_precursor_[Bombyx_mori]
GO:0001561 P fatty acid alpha-oxidation
GO:0006631 P fatty acid metabolic process
GO:0016491 F oxidoreductase activity
GO:0031418 F L-ascorbic acid binding
GO:0046872 F metal ion binding
GO:0048244 F phytanoyl-CoA dioxygenase activity
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
8382 O_BomoMSG17545_complete:A_BomoMSG_c25857_g1_i4
123bp
8383 O_BomoMSG17546_complete:A_BomoMSG_c25859_g2_i2
623bp
 transketolase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004802 F transketolase activity
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0046872 F metal ion binding
8384 O_BomoMSG17547_complete:A_BomoMSG_c25859_g2_i2
177bp
8385 O_BomoMSG17548_complete:A_BomoMSG_c25859_g2_i2
175bp
8386 O_BomoMSG17549_complete:A_BomoMSG_c25859_g2_i2
145bp
8387 O_BomoMSG1754_5prime_partial:A_BomoMSG_c8479_g2_i1
130bp
 peripheral_plasma_membrane_protein_CASK_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004683 F calmodulin-dependent protein kinase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005954 C calcium- and calmodulin-dependent protein kinase complex
GO:0006468 P protein phosphorylation
GO:0007155 P cell adhesion
GO:0007163 P establishment or maintenance of cell polarity
GO:0007269 P neurotransmitter secretion
GO:0007274 P neuromuscular synaptic transmission
GO:0007298 P border follicle cell migration
GO:0007615 P anesthesia-resistant memory
GO:0007616 P long-term memory
GO:0007628 P adult walking behavior
GO:0008049 P male courtship behavior
GO:0008344 P adult locomotory behavior
GO:0008360 P regulation of cell shape
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0016020 C membrane
GO:0016080 P synaptic vesicle targeting
GO:0016081 P synaptic vesicle docking
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019233 P sensory perception of pain
GO:0031594 C neuromuscular junction
GO:0040011 P locomotion
GO:0040012 P regulation of locomotion
GO:0042043 F neurexin family protein binding
GO:0046331 P lateral inhibition
GO:0046928 P regulation of neurotransmitter secretion
GO:0048488 P synaptic vesicle endocytosis
GO:0061174 C type I terminal bouton
GO:0072375 P medium-term memory
GO:1900073 P regulation of neuromuscular synaptic transmission
GO:1900244 P positive regulation of synaptic vesicle endocytosis
GO:2000331 P regulation of terminal button organization
8388 O_BomoMSG17550_5prime_partial:A_BomoMSG_c25860_g1_i1
301bp
 twinfilin_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005938 C cell cortex
GO:0030837 P negative regulation of actin filament polymerization
8389 O_BomoMSG17551_complete:A_BomoMSG_c25860_g1_i2
344bp
 twinfilin_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005938 C cell cortex
GO:0030837 P negative regulation of actin filament polymerization
8390 O_BomoMSG17552_5prime_partial:A_BomoMSG_c25861_g2_i9
118bp
 unknown_[Bombyx_mori]
8391 O_BomoMSG17553_3prime_partial:A_BomoMSG_c25862_g1_i1
383bp
 cyclin_dependent_kinase_12_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0006468 P protein phosphorylation
GO:0006909 P phagocytosis
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019908 C nuclear cyclin-dependent protein kinase holoenzyme complex
GO:0022008 P neurogenesis
GO:0030332 F cyclin binding
GO:0040018 P positive regulation of multicellular organism growth
GO:0046579 P positive regulation of Ras protein signal transduction
GO:0051726 P regulation of cell cycle
GO:0070374 P positive regulation of ERK1 and ERK2 cascade
GO:0070816 P phosphorylation of RNA polymerase II C-terminal domain
GO:0090277 P positive regulation of peptide hormone secretion
8392 O_BomoMSG17554_3prime_partial:A_BomoMSG_c25862_g1_i2
471bp
 cyclin_dependent_kinase_12_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0006468 P protein phosphorylation
GO:0006909 P phagocytosis
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019908 C nuclear cyclin-dependent protein kinase holoenzyme complex
GO:0022008 P neurogenesis
GO:0030332 F cyclin binding
GO:0040018 P positive regulation of multicellular organism growth
GO:0046579 P positive regulation of Ras protein signal transduction
GO:0051726 P regulation of cell cycle
GO:0070374 P positive regulation of ERK1 and ERK2 cascade
GO:0070816 P phosphorylation of RNA polymerase II C-terminal domain
GO:0090277 P positive regulation of peptide hormone secretion
8393 O_BomoMSG17555_internal:A_BomoMSG_c25863_g1_i1
410bp
 uncharacterized_protein_LOC110384853_[Bombyx_mori]
8394 O_BomoMSG17556_internal:A_BomoMSG_c25863_g1_i2
497bp
 uncharacterized_protein_LOC110384853_[Bombyx_mori]
8395 O_BomoMSG17557_complete:A_BomoMSG_c25864_g1_i1
328bp
 uncharacterized_protein_LOC101738950_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0019538 P protein metabolic process
8396 O_BomoMSG17558_internal:A_BomoMSG_c25865_g1_i1
565bp
 PREDICTED:_uncharacterized_protein_LOC106126988_[Papilio_xuthus]
8397 O_BomoMSG17559_internal:A_BomoMSG_c25866_g1_i1
310bp
 Yokozuna_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004190 F aspartic-type endopeptidase activity
GO:0005524 F ATP binding
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
8398 O_BomoMSG1755_internal:A_BomoMSG_c8497_g1_i1
111bp
 neuralized-like_protein_4_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005737 C cytoplasm
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0008150 P biological_process
8399 O_BomoMSG17560_internal:A_BomoMSG_c25866_g1_i5
102bp
 Yokozuna_[Bombyx_mori]
8400 O_BomoMSG17561_3prime_partial:A_BomoMSG_c25866_g1_i6
319bp
 Yokozuna_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004190 F aspartic-type endopeptidase activity
GO:0005524 F ATP binding
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
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