Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
7921	O_BomoMSG1712_internal:A_BomoMSG_c8121_g1_i1 104bp	Bomo_Chr23	crossover_junction_endonuclease_MUS81_[Bombyx_mori]	GO:0000711 P meiotic DNA repair synthesis GO:0000712 P resolution of meiotic recombination intermediates GO:0000724 P double-strand break repair via homologous recombination GO:0000737 P DNA catabolic process, endonucleolytic GO:0003677 F DNA binding GO:0004518 F nuclease activity GO:0004519 F endonuclease activity GO:0005634 C nucleus GO:0005739 C mitochondrion GO:0006259 P DNA metabolic process GO:0006281 P DNA repair GO:0006302 P double-strand break repair GO:0006310 P DNA recombination GO:0006974 P cellular response to DNA damage stimulus GO:0007131 P reciprocal meiotic recombination GO:0008821 F crossover junction endodeoxyribonuclease activity GO:0016787 F hydrolase activity GO:0031573 P mitotic intra-S DNA damage checkpoint signaling GO:0033314 P mitotic DNA replication checkpoint signaling GO:0046872 F metal ion binding GO:0048476 C Holliday junction resolvase complex GO:0051321 P meiotic cell cycle
7922	O_BomoMSG17130_internal:A_BomoMSG_c25727_g1_i2 575bp	Bomo_Chr4	C3_and_PZP-like_alpha-2-macroglobulin_domain-containing_protein_8_isoform_X2_[Bombyx_mori]	GO:0001933 P negative regulation of protein phosphorylation GO:0001942 P hair follicle development GO:0004866 F endopeptidase inhibitor activity GO:0004867 F serine-type endopeptidase inhibitor activity GO:0005576 C extracellular region GO:0005615 C extracellular space GO:0005886 C plasma membrane GO:0009986 C cell surface GO:0010466 P negative regulation of peptidase activity GO:0010839 P negative regulation of keratinocyte proliferation GO:0010951 P negative regulation of endopeptidase activity GO:0016020 C membrane GO:0030414 F peptidase inhibitor activity GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway GO:0031225 C anchored component of membrane GO:0045616 P regulation of keratinocyte differentiation GO:0050431 F transforming growth factor beta binding GO:0061045 P negative regulation of wound healing GO:0072675 P osteoclast fusion
7923	O_BomoMSG17131_complete:A_BomoMSG_c25727_g1_i2 127bp	Bomo_Chr4
7924	O_BomoMSG17132_5prime_partial:A_BomoMSG_c25727_g1_i2 116bp	Bomo_Chr4
7925	O_BomoMSG17133_5prime_partial:A_BomoMSG_c25727_g1_i2 105bp	Bomo_Chr4
7926	O_BomoMSG17134_internal:A_BomoMSG_c25727_g1_i3 255bp	Bomo_Chr4	C3_and_PZP-like_alpha-2-macroglobulin_domain-containing_protein_8_isoform_X2_[Bombyx_mori]	GO:0001933 P negative regulation of protein phosphorylation GO:0001942 P hair follicle development GO:0004866 F endopeptidase inhibitor activity GO:0004867 F serine-type endopeptidase inhibitor activity GO:0005576 C extracellular region GO:0005615 C extracellular space GO:0005886 C plasma membrane GO:0009986 C cell surface GO:0010466 P negative regulation of peptidase activity GO:0010839 P negative regulation of keratinocyte proliferation GO:0010951 P negative regulation of endopeptidase activity GO:0016020 C membrane GO:0030414 F peptidase inhibitor activity GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway GO:0031225 C anchored component of membrane GO:0045616 P regulation of keratinocyte differentiation GO:0050431 F transforming growth factor beta binding GO:0061045 P negative regulation of wound healing GO:0072675 P osteoclast fusion
7927	O_BomoMSG17135_5prime_partial:A_BomoMSG_c25727_g1_i3 116bp	Bomo_Chr4
7928	O_BomoMSG17136_5prime_partial:A_BomoMSG_c25727_g1_i3 105bp	Bomo_Chr4
7929	O_BomoMSG17137_internal:A_BomoMSG_c25727_g1_i4 549bp	Bomo_Chr4	C3_and_PZP-like_alpha-2-macroglobulin_domain-containing_protein_8_isoform_X1_[Bombyx_mori]	GO:0001933 P negative regulation of protein phosphorylation GO:0001942 P hair follicle development GO:0004866 F endopeptidase inhibitor activity GO:0004867 F serine-type endopeptidase inhibitor activity GO:0005576 C extracellular region GO:0005615 C extracellular space GO:0005886 C plasma membrane GO:0009986 C cell surface GO:0010466 P negative regulation of peptidase activity GO:0010839 P negative regulation of keratinocyte proliferation GO:0010951 P negative regulation of endopeptidase activity GO:0016020 C membrane GO:0030414 F peptidase inhibitor activity GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway GO:0031225 C anchored component of membrane GO:0045616 P regulation of keratinocyte differentiation GO:0050431 F transforming growth factor beta binding GO:0061045 P negative regulation of wound healing GO:0072675 P osteoclast fusion
7930	O_BomoMSG17138_complete:A_BomoMSG_c25727_g1_i4 127bp	Bomo_Chr4
7931	O_BomoMSG17139_5prime_partial:A_BomoMSG_c25727_g1_i4 116bp	Bomo_Chr4
7932	O_BomoMSG1713_internal:A_BomoMSG_c8149_g1_i1 112bp	Bomo_Chr28	hypothetical_protein_WH47_12656_[Habropoda_laboriosa]
7933	O_BomoMSG17140_5prime_partial:A_BomoMSG_c25727_g1_i4 105bp	Bomo_Chr4
7934	O_BomoMSG17141_3prime_partial:A_BomoMSG_c25727_g2_i1 390bp	Bomo_Chr4	C3_and_PZP-like_alpha-2-macroglobulin_domain-containing_protein_8_isoform_X2_[Bombyx_mori]	GO:0001933 P negative regulation of protein phosphorylation GO:0001942 P hair follicle development GO:0004866 F endopeptidase inhibitor activity GO:0004867 F serine-type endopeptidase inhibitor activity GO:0005576 C extracellular region GO:0005615 C extracellular space GO:0005886 C plasma membrane GO:0009986 C cell surface GO:0010466 P negative regulation of peptidase activity GO:0010839 P negative regulation of keratinocyte proliferation GO:0010951 P negative regulation of endopeptidase activity GO:0016020 C membrane GO:0030414 F peptidase inhibitor activity GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway GO:0031225 C anchored component of membrane GO:0045616 P regulation of keratinocyte differentiation GO:0050431 F transforming growth factor beta binding GO:0061045 P negative regulation of wound healing GO:0072675 P osteoclast fusion
7935	O_BomoMSG17142_complete:A_BomoMSG_c25727_g2_i1 128bp	Bomo_Chr4
7936	O_BomoMSG17143_5prime_partial:A_BomoMSG_c25727_g2_i1 121bp	Bomo_Chr4
7937	O_BomoMSG17144_internal:A_BomoMSG_c25727_g2_i2 455bp	Bomo_Chr4	C3_and_PZP-like_alpha-2-macroglobulin_domain-containing_protein_8_isoform_X2_[Bombyx_mori]	GO:0001933 P negative regulation of protein phosphorylation GO:0001942 P hair follicle development GO:0004866 F endopeptidase inhibitor activity GO:0004867 F serine-type endopeptidase inhibitor activity GO:0005576 C extracellular region GO:0005615 C extracellular space GO:0005886 C plasma membrane GO:0009986 C cell surface GO:0010466 P negative regulation of peptidase activity GO:0010839 P negative regulation of keratinocyte proliferation GO:0010951 P negative regulation of endopeptidase activity GO:0016020 C membrane GO:0030414 F peptidase inhibitor activity GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway GO:0031225 C anchored component of membrane GO:0045616 P regulation of keratinocyte differentiation GO:0050431 F transforming growth factor beta binding GO:0061045 P negative regulation of wound healing GO:0072675 P osteoclast fusion
7938	O_BomoMSG17145_complete:A_BomoMSG_c25727_g2_i2 130bp	Bomo_Chr4
7939	O_BomoMSG17146_5prime_partial:A_BomoMSG_c25727_g2_i2 121bp	Bomo_Chr4
7940	O_BomoMSG17147_5prime_partial:A_BomoMSG_c25728_g1_i1 113bp	Bomo_Chr5
7941	O_BomoMSG17148_5prime_partial:A_BomoMSG_c25728_g1_i3 274bp	Bomo_Chr5	putative_leucine-rich_repeat-containing_protein_DDB_G0290503_[Bombyx_mori]
7942	O_BomoMSG17149_3prime_partial:A_BomoMSG_c25728_g1_i4 200bp	Bomo_Chr5	putative_leucine-rich_repeat-containing_protein_DDB_G0290503_[Bombyx_mori]
7943	O_BomoMSG1714_5prime_partial:A_BomoMSG_c8152_g1_i1 147bp	Bomo_Chr3	myotrophin_[Bombyx_mori]	GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0048471 C perinuclear region of cytoplasm
7944	O_BomoMSG17150_internal:A_BomoMSG_c25728_g2_i1 245bp	Bomo_Chr5	putative_leucine-rich_repeat-containing_protein_DDB_G0290503_[Bombyx_mori]
7945	O_BomoMSG17151_5prime_partial:A_BomoMSG_c25729_g1_i1 339bp	Bomo_Chr22	Ca2_/calmodulin-dependent_protein_kinase_II_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0004672 F protein kinase activity GO:0004674 F protein serine/threonine kinase activity GO:0004683 F calmodulin-dependent protein kinase activity GO:0005515 F protein binding GO:0005516 F calmodulin binding GO:0005524 F ATP binding GO:0005737 C cytoplasm GO:0005886 C plasma membrane GO:0005954 C calcium- and calmodulin-dependent protein kinase complex GO:0006468 P protein phosphorylation GO:0007268 P chemical synaptic transmission GO:0007528 P neuromuscular junction development GO:0007611 P learning or memory GO:0007616 P long-term memory GO:0007619 P courtship behavior GO:0008049 P male courtship behavior GO:0008582 P regulation of synaptic assembly at neuromuscular junction GO:0016301 F kinase activity GO:0016310 P phosphorylation GO:0016740 F transferase activity GO:0019233 P sensory perception of pain GO:0030424 C axon GO:0030425 C dendrite GO:0045211 C postsynaptic membrane GO:0048786 C presynaptic active zone GO:0051489 P regulation of filopodium assembly GO:0060278 P regulation of ovulation
7946	O_BomoMSG17152_internal:A_BomoMSG_c25731_g1_i1 315bp	Bomo_Chr6	pre-mRNA-splicing_factor_18_[Bombyx_mori]	GO:0000350 P generation of catalytic spliceosome for second transesterification step GO:0000386 F second spliceosomal transesterification activity GO:0005634 C nucleus GO:0005681 C spliceosomal complex GO:0005682 C U5 snRNP GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0016607 C nuclear speck GO:0046540 C U4/U6 x U5 tri-snRNP complex GO:0071021 C U2-type post-spliceosomal complex GO:0071048 P nuclear mRNA surveillance
7947	O_BomoMSG17153_3prime_partial:A_BomoMSG_c25731_g1_i2 320bp	Bomo_Chr6	pre-mRNA-splicing_factor_18_[Bombyx_mori]	GO:0000350 P generation of catalytic spliceosome for second transesterification step GO:0000386 F second spliceosomal transesterification activity GO:0005634 C nucleus GO:0005681 C spliceosomal complex GO:0005682 C U5 snRNP GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0016607 C nuclear speck GO:0046540 C U4/U6 x U5 tri-snRNP complex GO:0071021 C U2-type post-spliceosomal complex GO:0071048 P nuclear mRNA surveillance
7948	O_BomoMSG17154_3prime_partial:A_BomoMSG_c25731_g1_i3 188bp	Bomo_Chr6	pre-mRNA-splicing_factor_18_[Bombyx_mori]	GO:0000350 P generation of catalytic spliceosome for second transesterification step GO:0000386 F second spliceosomal transesterification activity GO:0003674 F molecular_function GO:0005634 C nucleus GO:0005681 C spliceosomal complex GO:0005682 C U5 snRNP GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0016020 C membrane GO:0016607 C nuclear speck GO:0032269 P negative regulation of cellular protein metabolic process GO:0046540 C U4/U6 x U5 tri-snRNP complex GO:0071021 C U2-type post-spliceosomal complex GO:0071048 P nuclear mRNA surveillance
7949	O_BomoMSG17155_3prime_partial:A_BomoMSG_c25732_g1_i4 227bp	Bomo_Chr14	tRNA:m(4)X_modification_enzyme_TRM13_homolog_isoform_X1_[Bombyx_mori]	GO:0008033 P tRNA processing GO:0008168 F methyltransferase activity GO:0008175 F tRNA methyltransferase activity GO:0016740 F transferase activity GO:0030488 P tRNA methylation GO:0032259 P methylation GO:0046872 F metal ion binding
7950	O_BomoMSG17156_5prime_partial:A_BomoMSG_c25733_g1_i2 287bp	Bomo_Chr1	RING_finger_and_SPRY_domain-containing_protein_1_isoform_X1_[Bombyx_mori]	GO:0003674 F molecular_function GO:0005575 C cellular_component GO:0005576 C extracellular region GO:0008150 P biological_process GO:0008270 F zinc ion binding GO:0046872 F metal ion binding