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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7951 O_BomoMSG17157_5prime_partial:A_BomoMSG_c25733_g1_i3
119bp
 RING_finger_and_SPRY_domain-containing_protein_1_isoform_X2_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
7952 O_BomoMSG17158_complete:A_BomoMSG_c25735_g2_i1
396bp
 myeloid_differentiation_primary_response_protein_MyD88_isoform_X1_[Bombyx_mori]
GO:0002376 P immune system process
GO:0002755 P MyD88-dependent toll-like receptor signaling pathway
GO:0005737 C cytoplasm
GO:0006954 P inflammatory response
GO:0007165 P signal transduction
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0045087 P innate immune response
GO:0070976 F TIR domain binding
7953 O_BomoMSG17159_complete:A_BomoMSG_c25735_g2_i1
110bp
7954 O_BomoMSG1715_complete:A_BomoMSG_c8185_g1_i1
333bp
 tubulin-specific_chaperone_C_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0003924 F GTPase activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006457 P protein folding
GO:0007021 P tubulin complex assembly
GO:0007023 P post-chaperonin tubulin folding pathway
GO:0008152 P metabolic process
GO:0015631 F tubulin binding
GO:0032391 C photoreceptor connecting cilium
7955 O_BomoMSG17160_complete:A_BomoMSG_c25735_g3_i1
273bp
 golgin_subfamily_A_member_1_isoform_X1_[Bombyx_mori]
GO:0000042 P protein localization to Golgi apparatus
GO:0005515 F protein binding
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0016020 C membrane
GO:0032580 C Golgi cisterna membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0048471 C perinuclear region of cytoplasm
7956 O_BomoMSG17161_complete:A_BomoMSG_c25735_g3_i2
815bp
 eukaryotic_translation_initiation_factor_2-alpha_kinase_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0017148 P negative regulation of translation
7957 O_BomoMSG17162_complete:A_BomoMSG_c25735_g3_i2
108bp
7958 O_BomoMSG17163_complete:A_BomoMSG_c25735_g3_i2
106bp
7959 O_BomoMSG17164_complete:A_BomoMSG_c25735_g3_i3
815bp
 eukaryotic_translation_initiation_factor_2-alpha_kinase_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0017148 P negative regulation of translation
7960 O_BomoMSG17165_complete:A_BomoMSG_c25735_g3_i3
108bp
7961 O_BomoMSG17166_complete:A_BomoMSG_c25735_g3_i3
106bp
7962 O_BomoMSG17167_5prime_partial:A_BomoMSG_c25735_g3_i3
102bp
7963 O_BomoMSG17168_5prime_partial:A_BomoMSG_c25735_g6_i1
135bp
7964 O_BomoMSG17169_5prime_partial:A_BomoMSG_c25735_g6_i1
100bp
 LOW_QUALITY_PROTEIN:_huntingtin-interacting_protein_1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006897 P endocytosis
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0030136 C clathrin-coated vesicle
GO:0030154 P cell differentiation
GO:0030276 F clathrin binding
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
GO:0042981 P regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0048260 P positive regulation of receptor-mediated endocytosis
GO:0048268 P clathrin coat assembly
GO:0072583 P clathrin-dependent endocytosis
GO:0097190 P apoptotic signaling pathway
7965 O_BomoMSG1716_complete:A_BomoMSG_c8185_g1_i2
333bp
 tubulin-specific_chaperone_C_[Bombyx_mori]
GO:0000902 P cell morphogenesis
GO:0003924 F GTPase activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006457 P protein folding
GO:0007021 P tubulin complex assembly
GO:0007023 P post-chaperonin tubulin folding pathway
GO:0008152 P metabolic process
GO:0015631 F tubulin binding
GO:0032391 C photoreceptor connecting cilium
7966 O_BomoMSG17170_5prime_partial:A_BomoMSG_c25735_g6_i2
135bp
7967 O_BomoMSG17171_5prime_partial:A_BomoMSG_c25735_g6_i2
100bp
 LOW_QUALITY_PROTEIN:_huntingtin-interacting_protein_1_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006897 P endocytosis
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0030136 C clathrin-coated vesicle
GO:0030154 P cell differentiation
GO:0030276 F clathrin binding
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
GO:0042981 P regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0048260 P positive regulation of receptor-mediated endocytosis
GO:0048268 P clathrin coat assembly
GO:0072583 P clathrin-dependent endocytosis
GO:0097190 P apoptotic signaling pathway
7968 O_BomoMSG17172_complete:A_BomoMSG_c25737_g1_i1
289bp
 thioredoxin_domain-containing_protein_15_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005623 C obsolete cell
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0045454 P cell redox homeostasis
7969 O_BomoMSG17173_internal:A_BomoMSG_c25738_g1_i1
111bp
 blood_vessel_epicardial_substance_isoform_X3_[Bombyx_mori]
GO:0002027 P regulation of heart rate
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030552 F cAMP binding
GO:0042383 C sarcolemma
GO:0042391 P regulation of membrane potential
GO:0060931 P sinoatrial node cell development
7970 O_BomoMSG17174_3prime_partial:A_BomoMSG_c25738_g2_i1
385bp
 DALR_anticodon-binding_domain-containing_protein_3_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004814 F arginine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006420 P arginyl-tRNA aminoacylation
GO:0008150 P biological_process
7971 O_BomoMSG17175_3prime_partial:A_BomoMSG_c25739_g1_i1
327bp
 CWF19-like_protein_2_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003824 F catalytic activity
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
7972 O_BomoMSG17176_complete:A_BomoMSG_c25739_g1_i1
281bp
 CWF19-like_protein_2_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003824 F catalytic activity
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
7973 O_BomoMSG17177_internal:A_BomoMSG_c25739_g1_i2
168bp
 CWF19-like_protein_2_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003824 F catalytic activity
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
7974 O_BomoMSG17178_5prime_partial:A_BomoMSG_c25741_g1_i1
493bp
 integral_membrane_protein_GPR180_[Bombyx_mori]
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019236 P response to pheromone
7975 O_BomoMSG17179_complete:A_BomoMSG_c25741_g1_i1
140bp
7976 O_BomoMSG1717_internal:A_BomoMSG_c8190_g2_i1
183bp
 protein_strawberry_notch_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007219 P Notch signaling pathway
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048190 P wing disc dorsal/ventral pattern formation
7977 O_BomoMSG17180_3prime_partial:A_BomoMSG_c25742_g1_i1
949bp
 Uncharacterized_protein_OBRU01_16526,_partial_[Operophtera_brumata]
7978 O_BomoMSG17181_internal:A_BomoMSG_c25742_g1_i2
694bp
 Uncharacterized_protein_OBRU01_16526,_partial_[Operophtera_brumata]
7979 O_BomoMSG17182_3prime_partial:A_BomoMSG_c25742_g1_i3
949bp
 Uncharacterized_protein_OBRU01_16526,_partial_[Operophtera_brumata]
7980 O_BomoMSG17183_3prime_partial:A_BomoMSG_c25743_g1_i1
376bp
 brain_tumor_protein_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
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