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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
781 O_BomoMSG10703_internal:A_BomoMSG_c22854_g1_i1
378bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101743043_[Bombyx_mori]
782 O_BomoMSG10704_internal:A_BomoMSG_c22854_g1_i2
482bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101743043_[Bombyx_mori]
783 O_BomoMSG10705_internal:A_BomoMSG_c22854_g1_i3
355bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101743043_[Bombyx_mori]
784 O_BomoMSG10706_internal:A_BomoMSG_c22855_g1_i1
154bp
 mediator_of_RNA_polymerase_II_transcription_subunit_1_[Bombyx_mori]
785 O_BomoMSG10707_5prime_partial:A_BomoMSG_c22856_g1_i1
105bp
 zinc_finger_and_BTB_domain-containing_protein_14_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
786 O_BomoMSG10708_complete:A_BomoMSG_c22856_g1_i2
257bp
 zinc_finger_and_BTB_domain-containing_protein_14_isoform_X2_[Bombyx_mori]
GO:0002118 P aggressive behavior
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007417 P central nervous system development
GO:0007517 P muscle organ development
GO:0007530 P sex determination
GO:0007617 P mating behavior
GO:0007618 P mating
GO:0007620 P copulation
GO:0008049 P male courtship behavior
GO:0016199 P axon midline choice point recognition
GO:0016543 P male courtship behavior, orientation prior to leg tapping and wing vibration
GO:0016544 P male courtship behavior, tapping to detect pheromone
GO:0016545 P male courtship behavior, veined wing vibration
GO:0021954 P central nervous system neuron development
GO:0044719 P regulation of imaginal disc-derived wing size
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0046661 P male sex differentiation
GO:0046872 F metal ion binding
GO:0048047 P mating behavior, sex discrimination
GO:0048065 P male courtship behavior, veined wing extension
GO:0048813 P dendrite morphogenesis
GO:0060179 P male mating behavior
787 O_BomoMSG10709_internal:A_BomoMSG_c22859_g1_i1
172bp
 transcriptional_regulator_ATRX_[Danaus_plexippus_plexippus]
788 O_BomoMSG1070_internal:A_BomoMSG_c5043_g1_i1
155bp
 type_IV_collagen,_partial_[Bombyx_mori]
GO:0005201 F extracellular matrix structural constituent
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005581 C collagen trimer
GO:0005587 C collagen type IV trimer
GO:0005604 C basement membrane
GO:0007391 P dorsal closure
GO:0035848 P oviduct morphogenesis
GO:0055013 P cardiac muscle cell development
789 O_BomoMSG10710_5prime_partial:A_BomoMSG_c22859_g1_i1
147bp
790 O_BomoMSG10711_3prime_partial:A_BomoMSG_c22859_g1_i1
130bp
791 O_BomoMSG10712_internal:A_BomoMSG_c22862_g2_i1
105bp
792 O_BomoMSG10713_internal:A_BomoMSG_c22862_g2_i2
100bp
 TATA-binding_protein-associated_factor_172_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0035562 P negative regulation of chromatin binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0045892 P negative regulation of transcription, DNA-templated
793 O_BomoMSG10714_internal:A_BomoMSG_c22862_g2_i2
100bp
794 O_BomoMSG10715_5prime_partial:A_BomoMSG_c22864_g1_i1
563bp
 DNA-directed_RNA_polymerase,_mitochondrial_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005739 C mitochondrion
GO:0006351 P transcription, DNA-templated
GO:0006390 P mitochondrial transcription
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
795 O_BomoMSG10716_complete:A_BomoMSG_c22864_g1_i1
127bp
796 O_BomoMSG10717_complete:A_BomoMSG_c22864_g1_i1
124bp
797 O_BomoMSG10718_complete:A_BomoMSG_c22864_g1_i2
362bp
 DNA-directed_RNA_polymerase,_mitochondrial_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005739 C mitochondrion
GO:0006351 P transcription, DNA-templated
GO:0006390 P mitochondrial transcription
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
798 O_BomoMSG10719_complete:A_BomoMSG_c22864_g1_i2
124bp
799 O_BomoMSG1071_internal:A_BomoMSG_c5046_g1_i1
113bp
 gelsolin_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0006909 P phagocytosis
GO:0030041 P actin filament polymerization
GO:0045010 P actin nucleation
GO:0046872 F metal ion binding
GO:0051014 P actin filament severing
GO:0051016 P barbed-end actin filament capping
800 O_BomoMSG10720_5prime_partial:A_BomoMSG_c22869_g1_i1
220bp
 alpha-1,2-mannosyltransferase_ALG9_isoform_X2_[Bombyx_mori]
GO:0000030 F mannosyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0052918 F dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity
GO:0052926 F dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity
GO:0097502 P mannosylation
801 O_BomoMSG10721_complete:A_BomoMSG_c22873_g1_i1
243bp
 probable_alpha-aspartyl_dipeptidase_isoform_X1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0008239 F dipeptidyl-peptidase activity
GO:0016787 F hydrolase activity
GO:0016805 F dipeptidase activity
802 O_BomoMSG10722_internal:A_BomoMSG_c22877_g2_i1
225bp
 galactosylgalactosylxylosylprotein_3-beta-glucuronosyltransferase_I_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0005975 P carbohydrate metabolic process
GO:0006486 P protein glycosylation
GO:0015012 P heparan sulfate proteoglycan biosynthetic process
GO:0015018 F galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity
GO:0015020 F glucuronosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0030166 P proteoglycan biosynthetic process
GO:0030204 P chondroitin sulfate metabolic process
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0046872 F metal ion binding
GO:0050650 P chondroitin sulfate proteoglycan biosynthetic process
803 O_BomoMSG10723_internal:A_BomoMSG_c22877_g2_i2
118bp
 galactosylgalactosylxylosylprotein_3-beta-glucuronosyltransferase_I_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0005975 P carbohydrate metabolic process
GO:0006486 P protein glycosylation
GO:0015012 P heparan sulfate proteoglycan biosynthetic process
GO:0015018 F galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity
GO:0015020 F glucuronosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0030166 P proteoglycan biosynthetic process
GO:0030204 P chondroitin sulfate metabolic process
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0046872 F metal ion binding
GO:0050650 P chondroitin sulfate proteoglycan biosynthetic process
804 O_BomoMSG10724_internal:A_BomoMSG_c22880_g1_i1
421bp
 uncharacterized_protein_LOC101744810_isoform_X2_[Bombyx_mori]
805 O_BomoMSG10725_5prime_partial:A_BomoMSG_c22880_g1_i1
132bp
806 O_BomoMSG10726_3prime_partial:A_BomoMSG_c22881_g1_i2
303bp
 E3_ubiquitin-protein_ligase_MARCH6_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008270 F zinc ion binding
GO:0010498 P proteasomal protein catabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0019899 F enzyme binding
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0046872 F metal ion binding
GO:0070936 P protein K48-linked ubiquitination
GO:1990381 F ubiquitin-specific protease binding
807 O_BomoMSG10727_complete:A_BomoMSG_c22881_g1_i2
166bp
 CG8993_[Drosophila_busckii]
808 O_BomoMSG10728_5prime_partial:A_BomoMSG_c22881_g1_i2
115bp
809 O_BomoMSG10729_3prime_partial:A_BomoMSG_c22882_g1_i1
193bp
 ubiquitin_carboxyl-terminal_hydrolase_34_[Bombyx_mori]
GO:0000124 C SAGA complex
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016055 P Wnt signaling pathway
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0071108 P protein K48-linked deubiquitination
GO:0090263 P positive regulation of canonical Wnt signaling pathway
810 O_BomoMSG1072_internal:A_BomoMSG_c5057_g1_i1
166bp
 EH_domain-binding_protein_1_[Bombyx_mori]
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