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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7741 O_BomoMSG16969_5prime_partial:A_BomoMSG_c25676_g1_i4
245bp
 uncharacterized_protein_LOC101743872_[Bombyx_mori]
7742 O_BomoMSG1696_internal:A_BomoMSG_c8049_g1_i1
109bp
7743 O_BomoMSG16970_internal:A_BomoMSG_c25681_g1_i1
183bp
 PREDICTED:_uncharacterized_protein_LOC107169271_[Diuraphis_noxia]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
7744 O_BomoMSG16971_internal:A_BomoMSG_c25682_g1_i1
578bp
 DNA_ligase_4_[Bombyx_mori]
GO:0000127 C transcription factor TFIIIC complex
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006383 P transcription by RNA polymerase III
GO:0031965 C nuclear membrane
GO:0042791 P 5S class rRNA transcription by RNA polymerase III
GO:0042797 P tRNA transcription by RNA polymerase III
7745 O_BomoMSG16972_5prime_partial:A_BomoMSG_c25683_g1_i1
215bp
 fatty-acid_amide_hydrolase_2-B_[Bombyx_mori]
GO:0005811 C lipid droplet
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016884 F carbon-nitrogen ligase activity, with glutamine as amido-N-donor
GO:0017064 F fatty acid amide hydrolase activity
GO:0019369 P arachidonic acid metabolic process
7746 O_BomoMSG16973_complete:A_BomoMSG_c25683_g1_i2
530bp
 fatty-acid_amide_hydrolase_2-B_[Bombyx_mori]
GO:0005811 C lipid droplet
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016884 F carbon-nitrogen ligase activity, with glutamine as amido-N-donor
GO:0017064 F fatty acid amide hydrolase activity
GO:0019369 P arachidonic acid metabolic process
7747 O_BomoMSG16974_5prime_partial:A_BomoMSG_c25683_g1_i3
480bp
 fatty-acid_amide_hydrolase_2-B_[Bombyx_mori]
GO:0005811 C lipid droplet
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016884 F carbon-nitrogen ligase activity, with glutamine as amido-N-donor
GO:0017064 F fatty acid amide hydrolase activity
GO:0019369 P arachidonic acid metabolic process
7748 O_BomoMSG16975_internal:A_BomoMSG_c25684_g1_i2
515bp
 uncharacterized_protein_LOC101742755_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004601 F peroxidase activity
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0006909 P phagocytosis
GO:0006979 P response to oxidative stress
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0030198 P extracellular matrix organization
GO:0042744 P hydrogen peroxide catabolic process
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
7749 O_BomoMSG16976_3prime_partial:A_BomoMSG_c25684_g1_i3
214bp
 uncharacterized_protein_LOC101742755_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004601 F peroxidase activity
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0006909 P phagocytosis
GO:0006979 P response to oxidative stress
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0030198 P extracellular matrix organization
GO:0042744 P hydrogen peroxide catabolic process
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
7750 O_BomoMSG16977_internal:A_BomoMSG_c25684_g1_i4
545bp
 uncharacterized_protein_LOC101742755_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004601 F peroxidase activity
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0006909 P phagocytosis
GO:0006979 P response to oxidative stress
GO:0016491 F oxidoreductase activity
GO:0020037 F heme binding
GO:0030198 P extracellular matrix organization
GO:0042744 P hydrogen peroxide catabolic process
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0098869 P cellular oxidant detoxification
7751 O_BomoMSG16978_complete:A_BomoMSG_c25685_g1_i1
230bp
 transmembrane_protein_147_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
7752 O_BomoMSG16979_5prime_partial:A_BomoMSG_c25686_g1_i1
235bp
 ubiquitin_carboxyl-terminal_hydrolase_calypso_[Bombyx_mori]
GO:0000790 C chromatin
GO:0003682 F chromatin binding
GO:0004843 F thiol-dependent deubiquitinase
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0035517 C PR-DUB complex
GO:0035522 P monoubiquitinated histone H2A deubiquitination
GO:0036459 F thiol-dependent deubiquitinase
7753 O_BomoMSG1697_internal:A_BomoMSG_c8049_g1_i1
109bp
 probable_phospholipid-transporting_ATPase_IA_isoform_X3_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004012 F ATPase-coupled intramembrane lipid transporter activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0007612 P learning
GO:0008152 P metabolic process
GO:0015914 P phospholipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0019829 F ATPase-coupled cation transmembrane transporter activity
GO:0030335 P positive regulation of cell migration
GO:0031410 C cytoplasmic vesicle
GO:0034220 P ion transmembrane transport
GO:0042584 C chromaffin granule membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0045332 P phospholipid translocation
GO:0046872 F metal ion binding
GO:0048194 P Golgi vesicle budding
GO:0061092 P positive regulation of phospholipid translocation
GO:0070062 C extracellular exosome
GO:0098655 P cation transmembrane transport
7754 O_BomoMSG16980_complete:A_BomoMSG_c25686_g1_i2
457bp
 ubiquitin_carboxyl-terminal_hydrolase_calypso_[Bombyx_mori]
GO:0000790 C chromatin
GO:0003682 F chromatin binding
GO:0004843 F thiol-dependent deubiquitinase
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0035517 C PR-DUB complex
GO:0035522 P monoubiquitinated histone H2A deubiquitination
GO:0036459 F thiol-dependent deubiquitinase
7755 O_BomoMSG16981_complete:A_BomoMSG_c25686_g1_i3
510bp
 ubiquitin_carboxyl-terminal_hydrolase_calypso_[Bombyx_mori]
GO:0000790 C chromatin
GO:0003682 F chromatin binding
GO:0004843 F thiol-dependent deubiquitinase
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0035517 C PR-DUB complex
GO:0035522 P monoubiquitinated histone H2A deubiquitination
GO:0036459 F thiol-dependent deubiquitinase
7756 O_BomoMSG16982_5prime_partial:A_BomoMSG_c25687_g1_i1
268bp
 DNA_replication_licensing_factor_Mcm3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005656 C nuclear pre-replicative complex
GO:0006260 P DNA replication
GO:0006267 P pre-replicative complex assembly involved in nuclear cell cycle DNA replication
GO:0006270 P DNA replication initiation
GO:0007049 P cell cycle
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0016787 F hydrolase activity
GO:0022008 P neurogenesis
GO:0032508 P DNA duplex unwinding
GO:0042555 C MCM complex
GO:0043138 F 3'-5' DNA helicase activity
7757 O_BomoMSG16983_complete:A_BomoMSG_c25687_g1_i1
114bp
7758 O_BomoMSG16984_5prime_partial:A_BomoMSG_c25687_g1_i2
130bp
 DNA_replication_licensing_factor_Mcm3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006270 P DNA replication initiation
GO:0007049 P cell cycle
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0042555 C MCM complex
7759 O_BomoMSG16985_complete:A_BomoMSG_c25687_g1_i2
114bp
7760 O_BomoMSG16986_3prime_partial:A_BomoMSG_c25687_g1_i3
106bp
7761 O_BomoMSG16987_5prime_partial:A_BomoMSG_c25687_g1_i4
460bp
 DNA_replication_licensing_factor_Mcm3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006270 P DNA replication initiation
GO:0007049 P cell cycle
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0042555 C MCM complex
7762 O_BomoMSG16988_5prime_partial:A_BomoMSG_c25687_g1_i4
140bp
7763 O_BomoMSG16989_5prime_partial:A_BomoMSG_c25687_g1_i4
115bp
 unnamed_protein_product,_partial_[Tetraodon_nigroviridis]
7764 O_BomoMSG1698_3prime_partial:A_BomoMSG_c8049_g1_i1
99bp
7765 O_BomoMSG16990_complete:A_BomoMSG_c25687_g1_i4
114bp
7766 O_BomoMSG16991_complete:A_BomoMSG_c25689_g1_i1
236bp
 DnaJ_(Hsp40)_homolog_13_[Bombyx_mori]
GO:0006457 P protein folding
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030154 P cell differentiation
GO:0051082 F unfolded protein binding
7767 O_BomoMSG16992_complete:A_BomoMSG_c25691_g1_i1
246bp
 heme_oxygenase_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0001666 P response to hypoxia
GO:0001935 P endothelial cell proliferation
GO:0002246 P wound healing involved in inflammatory response
GO:0002686 P negative regulation of leukocyte migration
GO:0004392 F heme oxygenase (decyclizing) activity
GO:0004630 F phospholipase D activity
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0005901 C caveola
GO:0006788 P heme oxidation
GO:0006879 P cellular iron ion homeostasis
GO:0006915 P apoptotic process
GO:0006979 P response to oxidative stress
GO:0007264 P small GTPase mediated signal transduction
GO:0007588 P excretion
GO:0008217 P regulation of blood pressure
GO:0008219 P cell death
GO:0008285 P negative regulation of cell population proliferation
GO:0008630 P intrinsic apoptotic signaling pathway in response to DNA damage
GO:0010656 P negative regulation of muscle cell apoptotic process
GO:0014806 P smooth muscle hyperplasia
GO:0016020 C membrane
GO:0016491 F oxidoreductase activity
GO:0019899 F enzyme binding
GO:0020037 F heme binding
GO:0031670 P cellular response to nutrient
GO:0032764 P negative regulation of mast cell cytokine production
GO:0034101 P erythrocyte homeostasis
GO:0034383 P low-density lipoprotein particle clearance
GO:0034395 P regulation of transcription from RNA polymerase II promoter in response to iron
GO:0034605 P cellular response to heat
GO:0035094 P response to nicotine
GO:0035556 P intracellular signal transduction
GO:0042167 P heme catabolic process
GO:0042168 P heme metabolic process
GO:0042542 P response to hydrogen peroxide
GO:0042803 F protein homodimerization activity
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 C intracellular membrane-bounded organelle
GO:0043305 P negative regulation of mast cell degranulation
GO:0043392 P negative regulation of DNA binding
GO:0043433 P negative regulation of DNA-binding transcription factor activity
GO:0043524 P negative regulation of neuron apoptotic process
GO:0043619 P regulation of transcription from RNA polymerase II promoter in response to oxidative stress
GO:0043627 P response to estrogen
GO:0045080 P positive regulation of chemokine production
GO:0045765 P regulation of angiogenesis
GO:0045766 P positive regulation of angiogenesis
GO:0045909 P vasodilation
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048661 P positive regulation of smooth muscle cell proliferation
GO:0048662 P negative regulation of smooth muscle cell proliferation
GO:0051090 P regulation of DNA-binding transcription factor activity
GO:0051260 P protein homooligomerization
GO:0055072 P iron ion homeostasis
GO:0055114 P obsolete oxidation-reduction process
GO:0071243 P cellular response to arsenic-containing substance
GO:0071276 P cellular response to cadmium ion
GO:0071456 P cellular response to hypoxia
GO:1902042 P negative regulation of extrinsic apoptotic signaling pathway via death domain receptors
7768 O_BomoMSG16993_5prime_partial:A_BomoMSG_c25692_g1_i1
255bp
 ribonuclease_H2_subunit_B_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006401 P RNA catabolic process
GO:0032299 C ribonuclease H2 complex
7769 O_BomoMSG16994_complete:A_BomoMSG_c25692_g1_i2
310bp
 ribonuclease_H2_subunit_B_[Bombyx_mori]
GO:0005634 C nucleus
GO:0006401 P RNA catabolic process
GO:0032299 C ribonuclease H2 complex
7770 O_BomoMSG16995_internal:A_BomoMSG_c25693_g1_i1
193bp
 HMG_box-containing_protein_4_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0008333 P endosome to lysosome transport
GO:0016055 P Wnt signaling pathway
GO:0016589 C NURF complex
GO:0030178 P negative regulation of Wnt signaling pathway
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