SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/29137
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7081 O_BomoMSG16374_complete:A_BomoMSG_c25474_g1_i1
107bp
7082 O_BomoMSG16375_5prime_partial:A_BomoMSG_c25474_g1_i3
245bp
 PREDICTED:_ski_oncogene_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0046332 F SMAD binding
7083 O_BomoMSG16376_internal:A_BomoMSG_c25474_g1_i4
104bp
7084 O_BomoMSG16377_complete:A_BomoMSG_c25475_g1_i1
276bp
 uncharacterized_protein_LOC101746612_isoform_X1_[Bombyx_mori]
7085 O_BomoMSG16378_complete:A_BomoMSG_c25475_g1_i1
142bp
7086 O_BomoMSG16379_5prime_partial:A_BomoMSG_c25475_g1_i2
292bp
 uncharacterized_protein_LOC101746612_isoform_X1_[Bombyx_mori]
7087 O_BomoMSG1637_complete:A_BomoMSG_c7849_g1_i2
131bp
7088 O_BomoMSG16380_complete:A_BomoMSG_c25475_g1_i2
142bp
7089 O_BomoMSG16381_5prime_partial:A_BomoMSG_c25476_g1_i4
407bp
 NAD-dependent_deacetylase_sirtuin_2_homolog_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003682 F chromatin binding
GO:0004407 F histone deacetylase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005720 C heterochromatin
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005814 C centriole
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006476 P protein deacetylation
GO:0006914 P autophagy
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007399 P nervous system development
GO:0007417 P central nervous system development
GO:0008134 F transcription factor binding
GO:0008270 F zinc ion binding
GO:0008285 P negative regulation of cell population proliferation
GO:0010507 P negative regulation of autophagy
GO:0010801 P negative regulation of peptidyl-threonine phosphorylation
GO:0014065 P phosphatidylinositol 3-kinase signaling
GO:0016020 C membrane
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0016811 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
GO:0017136 F NAD-dependent histone deacetylase activity
GO:0021762 P substantia nigra development
GO:0022011 P myelination in peripheral nervous system
GO:0030154 P cell differentiation
GO:0030426 C growth cone
GO:0030496 C midbody
GO:0031641 P regulation of myelination
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0033010 C paranodal junction
GO:0033270 C paranode region of axon
GO:0033558 F protein deacetylase activity
GO:0034599 P cellular response to oxidative stress
GO:0034979 F NAD-dependent protein deacetylase activity
GO:0034983 P peptidyl-lysine deacetylation
GO:0035035 F histone acetyltransferase binding
GO:0035729 P cellular response to hepatocyte growth factor stimulus
GO:0035748 C myelin sheath abaxonal region
GO:0042177 P negative regulation of protein catabolic process
GO:0042826 F histone deacetylase binding
GO:0042903 F tubulin deacetylase activity
GO:0042995 C cell projection
GO:0043066 P negative regulation of apoptotic process
GO:0043130 F ubiquitin binding
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043204 C perikaryon
GO:0043209 C myelin sheath
GO:0043219 C lateral loop
GO:0043220 C Schmidt-Lanterman incisure
GO:0043388 P positive regulation of DNA binding
GO:0043491 P protein kinase B signaling
GO:0044224 C juxtaparanode region of axon
GO:0044242 P cellular lipid catabolic process
GO:0045598 P regulation of fat cell differentiation
GO:0045599 P negative regulation of fat cell differentiation
GO:0045836 P positive regulation of meiotic nuclear division
GO:0045843 P negative regulation of striated muscle tissue development
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0046970 F NAD-dependent histone deacetylase activity (H4-K16 specific)
GO:0048012 P hepatocyte growth factor receptor signaling pathway
GO:0048471 C perinuclear region of cytoplasm
GO:0048487 F beta-tubulin binding
GO:0048715 P negative regulation of oligodendrocyte differentiation
GO:0051287 F NAD binding
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
GO:0051726 P regulation of cell cycle
GO:0051781 P positive regulation of cell division
GO:0051987 P positive regulation of attachment of spindle microtubules to kinetochore
GO:0061428 P negative regulation of transcription from RNA polymerase II promoter in response to hypoxia
GO:0061433 P cellular response to caloric restriction
GO:0070403 F NAD+ binding
GO:0070446 P negative regulation of oligodendrocyte progenitor proliferation
GO:0070932 P histone H3 deacetylation
GO:0070933 P histone H4 deacetylation
GO:0071219 P cellular response to molecule of bacterial origin
GO:0071456 P cellular response to hypoxia
GO:0071872 P cellular response to epinephrine stimulus
GO:0072686 C mitotic spindle
GO:0072687 C meiotic spindle
GO:0090042 P tubulin deacetylation
GO:0097386 C glial cell projection
GO:0097456 C terminal loop
GO:1900119 P positive regulation of execution phase of apoptosis
GO:1900195 P positive regulation of oocyte maturation
GO:1900226 P negative regulation of NLRP3 inflammasome complex assembly
GO:1900425 P negative regulation of defense response to bacterium
GO:1901026 P ripoptosome assembly involved in necroptotic process
GO:2000378 P negative regulation of reactive oxygen species metabolic process
GO:2000777 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia
7090 O_BomoMSG16382_3prime_partial:A_BomoMSG_c25477_g1_i1
945bp
 LOW_QUALITY_PROTEIN:_probable_phospholipid-transporting_ATPase_VD_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004012 F ATPase-coupled intramembrane lipid transporter activity
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006812 P cation transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0015914 P phospholipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0045332 P phospholipid translocation
GO:0046872 F metal ion binding
7091 O_BomoMSG16383_5prime_partial:A_BomoMSG_c25477_g1_i1
161bp
 hypothetical_protein_AX774_g4572_[Zancudomyces_culisetae]
7092 O_BomoMSG16384_complete:A_BomoMSG_c25477_g1_i1
139bp
7093 O_BomoMSG16385_complete:A_BomoMSG_c25477_g1_i1
124bp
 protein-tyrosine-phosphatase_[Salinispora_pacifica]
7094 O_BomoMSG16386_internal:A_BomoMSG_c25477_g1_i2
203bp
 LOW_QUALITY_PROTEIN:_probable_phospholipid-transporting_ATPase_VD_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004012 F ATPase-coupled intramembrane lipid transporter activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006812 P cation transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0015914 P phospholipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0034220 P ion transmembrane transport
GO:0045332 P phospholipid translocation
GO:0046872 F metal ion binding
7095 O_BomoMSG16387_5prime_partial:A_BomoMSG_c25477_g1_i2
161bp
 hypothetical_protein_AX774_g4572_[Zancudomyces_culisetae]
7096 O_BomoMSG16388_complete:A_BomoMSG_c25477_g1_i2
106bp
7097 O_BomoMSG16389_internal:A_BomoMSG_c25477_g1_i3
816bp
 LOW_QUALITY_PROTEIN:_probable_phospholipid-transporting_ATPase_VD_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004012 F ATPase-coupled intramembrane lipid transporter activity
GO:0005524 F ATP binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006812 P cation transport
GO:0006869 P lipid transport
GO:0008152 P metabolic process
GO:0015914 P phospholipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0045332 P phospholipid translocation
GO:0046872 F metal ion binding
7098 O_BomoMSG1638_5prime_partial:A_BomoMSG_c7854_g1_i1
124bp
 uncharacterized_protein_LOC105841267_[Bombyx_mori]
7099 O_BomoMSG16390_5prime_partial:A_BomoMSG_c25477_g1_i3
161bp
 hypothetical_protein_AX774_g4572_[Zancudomyces_culisetae]
7100 O_BomoMSG16391_complete:A_BomoMSG_c25477_g1_i3
124bp
 protein-tyrosine-phosphatase_[Salinispora_pacifica]
7101 O_BomoMSG16392_3prime_partial:A_BomoMSG_c25479_g1_i1
556bp
 ecto-nucleotidase_precursor_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0008253 F 5'-nucleotidase activity
GO:0008768 F UDP-sugar diphosphatase activity
GO:0009166 P nucleotide catabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0046872 F metal ion binding
7102 O_BomoMSG16393_internal:A_BomoMSG_c25479_g1_i2
244bp
 ecto-nucleotidase_precursor_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006164 P purine nucleotide biosynthetic process
GO:0006195 P purine nucleotide catabolic process
GO:0006196 P AMP catabolic process
GO:0006259 P DNA metabolic process
GO:0007159 P leukocyte cell-cell adhesion
GO:0007420 P brain development
GO:0008198 F ferrous iron binding
GO:0008253 F 5'-nucleotidase activity
GO:0009166 P nucleotide catabolic process
GO:0009986 C cell surface
GO:0010044 P response to aluminum ion
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0031225 C anchored component of membrane
GO:0046085 P adenosine metabolic process
GO:0046086 P adenosine biosynthetic process
GO:0046135 P pyrimidine nucleoside catabolic process
GO:0046872 F metal ion binding
GO:0046889 P positive regulation of lipid biosynthetic process
GO:0050728 P negative regulation of inflammatory response
GO:0070062 C extracellular exosome
GO:0097060 C synaptic membrane
7103 O_BomoMSG16394_3prime_partial:A_BomoMSG_c25479_g1_i3
141bp
 ecto-nucleotidase_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0008253 F 5'-nucleotidase activity
GO:0008768 F UDP-sugar diphosphatase activity
GO:0009166 P nucleotide catabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0046872 F metal ion binding
7104 O_BomoMSG16395_3prime_partial:A_BomoMSG_c25479_g1_i4
385bp
 ecto-nucleotidase_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0008253 F 5'-nucleotidase activity
GO:0008768 F UDP-sugar diphosphatase activity
GO:0009166 P nucleotide catabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0046872 F metal ion binding
7105 O_BomoMSG16396_5prime_partial:A_BomoMSG_c25480_g1_i1
126bp
7106 O_BomoMSG16397_complete:A_BomoMSG_c25480_g1_i1
125bp
7107 O_BomoMSG16398_3prime_partial:A_BomoMSG_c25481_g1_i1
377bp
 PREDICTED:_myosin_heavy_chain_95F_[Amyelois_transitella]
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005875 C microtubule associated complex
GO:0005938 C cell cortex
GO:0006997 P nucleus organization
GO:0007015 P actin filament organization
GO:0007051 P spindle organization
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0007286 P spermatid development
GO:0007291 P sperm individualization
GO:0007297 P ovarian follicle cell migration
GO:0007298 P border follicle cell migration
GO:0007391 P dorsal closure
GO:0007552 P metamorphosis
GO:0007560 P imaginal disc morphogenesis
GO:0008017 F microtubule binding
GO:0008104 P protein localization
GO:0008152 P metabolic process
GO:0008363 P larval chitin-based cuticle development
GO:0016333 P morphogenesis of follicular epithelium
GO:0016459 C myosin complex
GO:0016461 C unconventional myosin complex
GO:0019749 P cytoskeleton-dependent cytoplasmic transport, nurse cell to oocyte
GO:0030036 P actin cytoskeleton organization
GO:0030048 P actin filament-based movement
GO:0030139 C endocytic vesicle
GO:0030317 P flagellated sperm motility
GO:0030426 C growth cone
GO:0030589 P pseudocleavage involved in syncytial blastoderm formation
GO:0031476 C myosin VI complex
GO:0031941 C filamentous actin
GO:0032027 F myosin light chain binding
GO:0032880 P regulation of protein localization
GO:0032956 P regulation of actin cytoskeleton organization
GO:0032970 P regulation of actin filament-based process
GO:0040001 P establishment of mitotic spindle localization
GO:0042623 F ATP hydrolysis activity
GO:0043234 C protein-containing complex
GO:0045167 P asymmetric protein localization involved in cell fate determination
GO:0045172 C germline ring canal
GO:0045175 P basal protein localization
GO:0045178 C basal part of cell
GO:0045217 P cell-cell junction maintenance
GO:0045921 P positive regulation of exocytosis
GO:0047497 P mitochondrion transport along microtubule
GO:0048477 P oogenesis
GO:0051015 F actin filament binding
GO:0051647 P nucleus localization
GO:0055057 P neuroblast division
GO:0055059 P asymmetric neuroblast division
GO:0061024 P membrane organization
GO:0070856 F myosin VI light chain binding
GO:0070864 C sperm individualization complex
GO:0070865 C investment cone
7108 O_BomoMSG16399_5prime_partial:A_BomoMSG_c25481_g1_i1
194bp
7109 O_BomoMSG1639_internal:A_BomoMSG_c7855_g1_i1
115bp
 ubiquitin_carboxyl-terminal_hydrolase_32_isoform_X1_[Bombyx_mori]
7110 O_BomoMSG163_internal:A_BomoMSG_c653_g1_i1
126bp
 exportin-7,_partial_[Helicoverpa_armigera]
GO:0005049 F nuclear export signal receptor activity
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005737 C cytoplasm
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008536 F small GTPase binding
GO:0015031 P protein transport
previous next from show/29137

- SilkBase 1999-2023 -